Microbacterium limosum: RYJ27_03740
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Entry
RYJ27_03740 CDS
T09965
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00300
Lysine biosynthesis
mliy00470
D-Amino acid metabolism
mliy01100
Metabolic pathways
mliy01110
Biosynthesis of secondary metabolites
mliy01120
Microbial metabolism in diverse environments
mliy01230
Biosynthesis of amino acids
Module
mliy_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
RYJ27_03740 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RYJ27_03740 (dapF)
Enzymes [BR:
mliy01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
RYJ27_03740 (dapF)
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Motif
Pfam:
DAP_epimerase
Motif
Other DBs
NCBI-ProteinID:
WOQ70333
UniProt:
A0AAU0MJ95
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All DBs
Position
774416..775285
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AA seq
289 aa
AA seq
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MPTIAFTKGHGTGNDFVIVADPDGQLDFSDAQVAALCDRRFGIGADGLLRVVRSAALAEG
ADAAASGAEWFMDYRNADGSAAEMCGNGIRVYARYLADAGLAVIDGEGILIGTRAGTKLV
TRVESGFEVDLGTWTVDEDGPLVRARGLVVARPGLGIDVGNPHVIVALPGDDELDGLDLS
WRPVLDPEPPAGANVEFAVPADPLVQAGVGVIRMRVFERGVGETLSCGTGVAAAALAVRH
WAGAGAPDVWRVTVPGGELGVRIQAHDGGAHVLLSGPATLVYSGEVALA
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgcccaccatcgcgttcacgaagggtcacgggacggggaacgacttcgtcatcgtcgcc
gaccccgacggccagctggacttctccgacgcccaggtcgccgcgctgtgcgaccgccgc
ttcggcatcggggccgacgggctgctgcgcgtggtgcgatcggccgcgctcgcggagggg
gcggatgccgcggcatccggcgccgagtggttcatggactaccgcaacgccgacggctcc
gcggccgagatgtgcggcaacggcatccgcgtctacgcgcgctacctcgccgacgcgggc
ctcgcggtgatcgacggcgaaggcatcctcatcggcacgcgcgcgggaaccaagctcgtc
acgcgcgtcgagtccggtttcgaggtcgatctcggcacgtggaccgtcgacgaggacgga
ccgctggtccgggcgcgcgggctggtcgtcgcccgccccggactcggcatcgacgtcggg
aatcctcacgtgatcgtggcgctgccgggcgacgacgagctcgacgggctcgatctgtcg
tggcggccggtgctcgacccggagcccccggccggcgcgaacgtggagttcgcggtaccc
gccgacccgctcgtgcaggcgggcgtcggcgtcatccggatgcgggtgttcgagcggggc
gtcggcgaaaccctgagctgcgggaccggcgtcgccgccgcggcgctcgccgtgcgtcac
tgggcgggggccggtgcgcccgacgtgtggcgcgtcacggtcccgggcggcgagctgggc
gtgcggatccaggcgcacgacgggggcgcgcacgtgctgctgtcgggccccgcgacgctg
gtgtactcgggggaggtcgccctcgcctga
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