KEGG   Microbacterium limosum: RYJ27_04330
Entry
RYJ27_04330       CDS       T09965                                 
Symbol
lpdA
Name
(GenBank) dihydrolipoyl dehydrogenase
  KO
K00382  dihydrolipoyl dehydrogenase [EC:1.8.1.4]
Organism
mliy  Microbacterium limosum
Pathway
mliy00010  Glycolysis / Gluconeogenesis
mliy00020  Citrate cycle (TCA cycle)
mliy00260  Glycine, serine and threonine metabolism
mliy00280  Valine, leucine and isoleucine degradation
mliy00310  Lysine degradation
mliy00380  Tryptophan metabolism
mliy00620  Pyruvate metabolism
mliy00630  Glyoxylate and dicarboxylate metabolism
mliy00640  Propanoate metabolism
mliy00670  One carbon pool by folate
mliy00785  Lipoic acid metabolism
mliy01100  Metabolic pathways
mliy01110  Biosynthesis of secondary metabolites
mliy01120  Microbial metabolism in diverse environments
mliy01200  Carbon metabolism
mliy01210  2-Oxocarboxylic acid metabolism
mliy01240  Biosynthesis of cofactors
Module
mliy_M00009  Citrate cycle (TCA cycle, Krebs cycle)
mliy_M00011  Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mliy_M00307  Pyruvate oxidation, pyruvate => acetyl-CoA
mliy_M00621  Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:mliy00001]
 09100 Metabolism
  09101 Carbohydrate metabolism
   00010 Glycolysis / Gluconeogenesis
    RYJ27_04330 (lpdA)
   00020 Citrate cycle (TCA cycle)
    RYJ27_04330 (lpdA)
   00620 Pyruvate metabolism
    RYJ27_04330 (lpdA)
   00630 Glyoxylate and dicarboxylate metabolism
    RYJ27_04330 (lpdA)
   00640 Propanoate metabolism
    RYJ27_04330 (lpdA)
  09105 Amino acid metabolism
   00260 Glycine, serine and threonine metabolism
    RYJ27_04330 (lpdA)
   00280 Valine, leucine and isoleucine degradation
    RYJ27_04330 (lpdA)
   00310 Lysine degradation
    RYJ27_04330 (lpdA)
   00380 Tryptophan metabolism
    RYJ27_04330 (lpdA)
  09108 Metabolism of cofactors and vitamins
   00785 Lipoic acid metabolism
    RYJ27_04330 (lpdA)
   00670 One carbon pool by folate
    RYJ27_04330 (lpdA)
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   04147 Exosome [BR:mliy04147]
    RYJ27_04330 (lpdA)
Enzymes [BR:mliy01000]
 1. Oxidoreductases
  1.8  Acting on a sulfur group of donors
   1.8.1  With NAD+ or NADP+ as acceptor
    1.8.1.4  dihydrolipoyl dehydrogenase
     RYJ27_04330 (lpdA)
Exosome [BR:mliy04147]
 Exosomal proteins
  Exosomal proteins of breast cancer cells
   RYJ27_04330 (lpdA)
SSDB
Motif
Pfam: Pyr_redox_2 Pyr_redox_dim Pyr_redox Pyr_redox_3 Thi4 HI0933_like GIDA FAD_binding_3 FAD_oxidored FAD_binding_2 NAD_binding_8 3HCDH_N DAO AlaDh_PNT_C 2-Hacid_dh_C ApbA Amino_oxidase ThiF
Other DBs
NCBI-ProteinID: WOQ70442
UniProt: A0AAU0MJL3
LinkDB
Position
complement(901333..902730)
AA seq 465 aa
MPHYDVVILGAGPGGYVAAVRSAQLGLSTAIIEEKYWGGVCLNVGCIPSKALLKNAELAH
IFQHKAKMFGMSGDVSFDYGVAFDRSRDVAEGRVKGIHYLMKKNKVTEYDGRGTFTDANT
IEVKTSASGTETVTFDNAIIATGSTVRLLPGVTLSENVVTYEEQILSRELPGSIVIVGAG
AIGMEFAYVMSNYGVKVTIVEFLDRALPNEDADVSKEIQKQYRNYGIEILTSTKVEKIDD
QGDKVVVSYTGKDGNAGSIEADKVLMSIGFAPRVEGFGLDKTGVELTERGAIGIDDHMRT
NVPHIYAIGDVTAKLQLAHVAEAQGVVAAETIGKAETMTLGDYRMMPRATFCSPQVASFG
LTEQQAKDEGHEIKVATFPFMANGKAHGLGEPVGFVKLIADAEHLELLGAHMIGPDVSEL
LPEMTLAQKWDLTALELARNVHTHPTLSEALQEGFHGLAGHMINF
NT seq 1398 nt   +upstreamnt  +downstreamnt
atgcctcattacgatgtcgtcatcctcggagccggccccggcgggtatgtcgcggccgtg
cgcagcgcccagctcgggctgtccaccgccatcatcgaagagaagtactggggcggtgtc
tgcctcaacgtcggctgcatcccctcgaaggcgctgctgaagaacgccgagctggcccac
atcttccagcacaaggcgaagatgttcggcatgtcgggcgacgtctccttcgactacgga
gtcgccttcgaccgcagccgcgacgtcgccgaggggcgcgtcaagggcatccactacctg
atgaagaagaacaaggtcaccgagtacgacggccgcggcaccttcaccgatgccaacacg
atcgaggtcaagacctccgccagcggcaccgagacggtgaccttcgacaacgcgatcatc
gcgacggggtccaccgtgcgcctgcttcccggcgtgaccctcagcgagaacgtcgtgacc
tacgaggagcagatcctctcgcgcgagcttcccggatcgatcgttatcgtcggcgccggc
gcgatcggcatggagttcgcctacgtcatgtcgaactacggcgtgaaggtgacgatcgtc
gagttcctcgaccgggccctgcccaacgaggacgccgacgtgtcgaaggagatccagaag
cagtaccgcaactacggcatcgagatcctcacctccaccaaggtcgagaagatcgacgac
cagggcgacaaggtcgtcgtgagttacaccggcaaggacggcaacgccggatcgatcgag
gccgacaaggtgctcatgtcgatcggcttcgccccgcgggtggagggcttcggcctcgac
aagaccggtgtcgagctcaccgaacgcggcgcgatcggcatcgacgatcacatgcgcacc
aacgtgccgcacatctacgcgatcggcgatgtcacggccaagctgcagctggcccacgtg
gccgaggcgcagggagtggtggccgcggagaccatcggcaaggccgagacgatgacgctg
ggcgactaccgcatgatgccccgcgcgacgttctgctcgcctcaggtcgcctccttcggt
ctgaccgagcagcaggccaaggacgaggggcacgagatcaaggtcgcgacgttccccttc
atggccaacggcaaggcgcacggccttggcgagcccgtcggattcgtgaagctgatcgcg
gatgccgagcacctcgagctgctgggcgcgcacatgatcggccccgacgtgtcggagctg
ctgcccgagatgaccctcgcgcagaagtgggacctcaccgccctggagctcgcgcgcaac
gtccacacgcacccgaccctgtcggaggcgctgcaggagggcttccacggcctggccggc
cacatgatcaacttctga

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