Microbacterium limosum: RYJ27_04450
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Entry
RYJ27_04450 CDS
T09965
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00470
D-Amino acid metabolism
mliy00550
Peptidoglycan biosynthesis
mliy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
RYJ27_04450 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
RYJ27_04450 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
mliy01011
]
RYJ27_04450 (murD)
Enzymes [BR:
mliy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
RYJ27_04450 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
mliy01011
]
Precursor biosynthesis
Amino acid ligase
RYJ27_04450 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
F420_oxidored
2-Hacid_dh_C
Oxidored_nitro
TrkA_N
NAD_binding_7
Pyr_redox_2
Shikimate_DH
Pyr_redox
Motif
Other DBs
NCBI-ProteinID:
WOQ70465
UniProt:
A0AAU0MJX6
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Position
928939..930507
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AA seq
522 aa
AA seq
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MAGARLVSAPLSELTSWHADWKGLRVAVLGLGQTGFSVADTLTELGAEVLVLTERADEEY
ERLLPVIGAALHVGALEPAPAELAGFDPELVIASPGFPPHHAAVRWCEESGVPLWGDIEL
AWRLRDKVVGADGSPAEWVFITGTNGKTTTTNLTAAMLVAGGMRAAPCGNIGIPVLDAVR
DPAGFDTLVVELSSHQLWYLSLSAPEGQPVPAASVCLNLADDHLQWHGSAEAYRDAKALV
YRNTRLACVYNKADPATREMVEDAEVIEGARAIGFDLGVPGPSDLGIVDGILVDRAFLEE
RRTSALEITTIERLARHGLGAPHIVSNILAAAALARSQGVAPAAIRDALDAFRLDPHRIE
VVAVHAGITWIDDSKATNPHAAASSLGAYPGAIWIVGGQLKGVDIGPLVAHRGPSARAAI
VIGEVRDEVVAAFGRHAPGVPVFEVQAGETEDVMRRVVELAAGVAREGDVVLLAPAAASF
DQFTGYAERGTRFADAVRKHIEQEPRGAADGDHDPDEAPGLG
NT seq
1569 nt
NT seq
+upstream
nt +downstream
nt
gtggctggcgcgcgcctcgtgagtgcgccgctgtcggagctgaccagctggcacgccgac
tggaagggccttcgggtcgccgtcctcggcctcggccagacggggttctccgtcgccgac
accctgaccgagctcggcgccgaggtgctcgtgctcaccgagcgcgccgacgaggagtac
gagcgcctgctgcccgtcatcggcgccgcgctgcacgtcggtgcgctcgagcccgccccg
gccgagctcgcggggttcgatcccgagctcgtgatcgcctcgcccgggttccccccgcat
cacgcggcggtgcgctggtgcgaggagtcgggcgtgccgctctggggcgacatcgagctg
gcgtggcgtctgcgcgacaaggtcgtgggcgccgacggctcgccggcggagtgggtgttc
atcaccgggaccaacggcaagaccacgacgaccaacctcaccgcggcgatgctcgtcgcg
ggcggcatgcgcgccgcgccatgcggcaacatcggcatcccggttctcgatgccgtgcgc
gaccccgccggcttcgacacgctcgtggtcgagctctccagccatcagctctggtacctc
tcgctctcggcgcccgaggggcagcccgtgcccgcggcatccgtctgcctcaatctggcc
gacgaccacctgcagtggcacgggtccgccgaggcgtaccgcgacgcgaaggccctcgtc
taccgcaacacgcgcctcgcctgcgtctacaacaaggctgatcccgcgacgcgcgagatg
gtcgaggatgccgaggtcatcgagggggctcgcgcgatcgggttcgacctcggcgtgccc
ggcccgagcgacctgggcatcgtcgacgggatcctcgtcgatcgcgcgttcctcgaggag
cgccgcacgagcgcgctcgagatcaccacgatcgagcgcctcgcccgccacgggctcggc
gctccccatatcgtctcgaacatcctcgccgccgcggcgctggcccggtcgcagggggtc
gcacccgccgcgatccgcgacgcgctcgacgcgttccggctcgacccccaccgcatcgag
gtcgtcgcggtgcacgccgggatcacatggatcgacgactcgaaggcgaccaacccccac
gccgccgcgtcgtcgctgggcgcgtaccccggtgccatctggatcgtgggagggcagctc
aagggcgtcgacatcgggccactcgtcgcgcaccgcgggccgtcggcgcgcgccgcgatc
gtcatcggcgaggtacgcgacgaggtcgtggcggcattcggccgacacgcgcccggggtt
cccgtgttcgaggtgcaggccggtgagactgaggacgtcatgaggcgcgtcgtggaactg
gcggcgggcgtcgcacgcgagggagatgtcgtcctgctcgcaccggccgcggcatccttc
gaccagttcaccggctacgccgagcggggcacgcgattcgcggacgccgtcaggaagcac
atcgagcaggaaccgaggggagcggcggatggcgatcacgaccccgacgaggccccgggg
ctcggctga
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