Microbacterium limosum: RYJ27_04895
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Entry
RYJ27_04895 CDS
T09965
Symbol
nirB
Name
(GenBank) nitrite reductase large subunit NirB
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00910
Nitrogen metabolism
mliy01100
Metabolic pathways
mliy01120
Microbial metabolism in diverse environments
mliy01310
Nitrogen cycle
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
RYJ27_04895 (nirB)
Enzymes [BR:
mliy01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
RYJ27_04895 (nirB)
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Ortholog
Paralog
GFIT
Motif
Pfam:
Pyr_redox_2
NIR_SIR
Pyr_redox
Fer2_BFD
NIR_SIR_ferr
Rubredoxin_C
NAD_binding_9
DAO
Pyr_redox_3
NAD_binding_7
Sacchrp_dh_NADP
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
WOQ70549
UniProt:
A0AAU0MIV3
LinkDB
All DBs
Position
complement(1016754..1019330)
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AA seq
858 aa
AA seq
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MPHPDDSTHIVVVGAGMVAHRFVESLLSRGDRPWRVTVIGDEARHPYDRVGLTGYFAGAS
AEDLTLDRSVLDDERVSFMRGTAVTAIDREAREVTTASGERVAYDRLVLATGSYAARLAV
DGFGLDGCFVYRTLDDVEALRGFVEARRAELGRPLTGTVIGGGLLGLEAAGALQGLGVES
TVVQSSDRLMSAQLDQPAGAALARLIEARGIRVKTGAITTRVDPGRDGRVTGLEFRDGTW
ERTDVVVFTVGVRPRDELARAAGLAVHERGGVLIDAECRTSDDRILAIGEVANFDGLCVG
LVAPGYAMAEVAATRLRGGDASFPGYDLSTKLKLSGVDVASFGDAFATTPGALDVVYADP
VAGVYKKLVLSDDAKTLLGGILVGDASAYGSLRPLVGGALGGDPAAYLMPEGGVAAPTGD
LPDSALVCSCNSVTAGAIRGAVQEEGCSDVAAVKSCTKAGAACGSCVTMIKKLVGTELAK
SGASLSSALCEHFDLSRRQLFDAVRVSGLRTFSAVIERFGTGRGCDICKPALASILSTLV
GGHVLEGENATLQDTNDHVMANLQKDGSYSVVPRIAGGEITPEGLLVIGQVAKDFGLYTK
ITGGQRIDMFGARLEQLPDIWKRLVDAGFESGHAYGKSLRTVKSCVGSTWCRYGVQDAVG
MAVQLELRYRGLRSPHKIKLGVSGCARECAEARGKDVGVIATEAGWNMYVGGNGGFTPRH
AVLLAEGLDDDALLRAIDRFLMYYIFTADRLQRTAPWFEDLEGGIDEVRAVIFDDSLGIC
ADLDAAMAAHVANYEDEWKATLADPEKLRRFASFVNAPATPDPSLAYTAERGQPRPATAA
EREDGRVLIAGTTLEVRR
NT seq
2577 nt
NT seq
+upstream
nt +downstream
nt
atgccccaccccgatgacagcacgcacatcgtggtggtgggagcgggcatggtggcccac
cgcttcgtggagagcctgctctcgcgcggcgatcgcccgtggcgcgtcaccgtcatcggg
gacgaggcccggcatccctacgaccgggtcgggctgaccgggtatttcgccggtgcgagc
gccgaagacctcaccctcgaccgctccgtgctcgacgacgaacgcgtgagcttcatgcgc
ggcacggccgtcaccgcgatcgaccgcgaggcgcgcgaggtcacgaccgcgtcgggcgag
cgcgtcgcttacgaccgcctggtgctggcgacgggctcgtacgcggcccgcctcgccgtc
gacggcttcgggctcgacggatgcttcgtctatcgcacgctcgacgacgtcgaggccctg
cgcggcttcgtcgaggcccggcgcgccgagctcggccgaccgctcaccggcaccgtcatc
ggcggcggcctgctcggcctcgaggcggcgggggccctgcagggcctgggtgtcgagagc
acggtcgtgcagtcctccgatcggctgatgtcggcccagctcgaccagccggcgggcgcc
gcgctcgcgcggctgatcgaggcgcgcggcatccgggtcaagaccggcgcgatcacgacc
cgcgtcgatcccggtcgcgacggccgggtgacggggctggagttccgcgacggcacgtgg
gagcgcacggatgtcgtggtcttcacggtgggcgtgcgcccgcgcgacgagcttgcccgc
gccgccggcctcgccgtgcacgagcgcggcggcgtgctcatcgacgccgaatgccgtacg
agcgacgaccgcatcctcgcgatcggcgaggtcgccaacttcgacgggctgtgcgtgggg
ctcgtcgcccccgggtacgcgatggccgaggtcgccgcgacccgcctgcggggtggcgac
gcctcgttcccgggatacgacctctccaccaagctgaagctcagcggggtcgacgtggcc
agcttcggcgacgcgttcgccacgacccccggcgcgctcgacgtcgtctacgccgacccc
gtcgcgggggtgtacaagaagctcgtcctctcggacgacgccaagacgctgctcggcggc
atcctcgtcggtgacgcctcggcctacggttcgctccggcccctcgtcggcggggctctc
ggtggcgaccccgccgcctacctcatgccggagggaggggtcgccgcgcccacgggagac
ctcccggactcggccctcgtctgctcgtgcaactcggtcaccgccggcgccatccgcggc
gccgtgcaggaggagggctgctccgacgtcgccgccgtgaagtcctgcacgaaggcgggc
gcggcgtgcgggtcgtgcgtcaccatgatcaagaagctcgtcggcaccgagctcgcgaaa
tccggcgcgagcctcagcagcgcgctctgcgagcatttcgacctctcgcgccgtcagctc
ttcgacgccgtgcgcgtctcgggtcttcgcaccttcagcgcggtcatcgagcgcttcggc
acgggacgcggctgcgacatctgcaagcccgccctcgcgagcatcctctcgaccctcgtc
ggcggtcacgtgctcgagggcgagaacgcgacgctgcaggacaccaacgaccacgtgatg
gcgaacctgcagaaggacggcagctattcggtggtcccgcgcatcgcggggggcgagatc
acgcccgagggactgctcgtgatcgggcaggtggccaaggacttcggcctgtacacgaag
atcacgggcggccagcgcatcgacatgttcggcgcgcggctcgagcagctgcccgacatc
tggaagcgcctcgtcgacgccggcttcgaatccgggcacgcgtacggcaagtcgctgcgc
acggtcaagtcgtgcgtgggatcgacctggtgccggtacggcgttcaggacgcggtggga
atggcggtgcagctcgaactgcgctaccggggcctgcgctctcctcacaagatcaagctc
ggcgtctcgggctgcgcgcgcgaatgcgccgaggcgcgcggcaaggacgtcggagtcatc
gccaccgaggcgggctggaacatgtacgtcggtggcaacggcggcttcacgccgcgccac
gcggtgctgttggcggaagggctcgacgacgacgctctcctgagggccatcgaccggttc
ctgatgtactacatcttcacggccgaccgcctgcagcgcaccgcgccgtggttcgaggac
ctggagggcggcatcgacgaggtgcgggccgtcatcttcgacgacagcctcggcatctgc
gcggacctcgacgccgcgatggccgcccacgtcgccaactacgaggacgagtggaaggcg
acgctggcggatcccgagaagctgcgccgcttcgcctccttcgtcaacgcgcccgcgacg
cccgacccgtcgctcgcgtacacggccgagcgggggcagccgcgtcccgcgaccgcggcg
gaacgggaggacggacgggtcctcatcgccggaaccaccctggaggtgcgccgatga
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