Microbacterium limosum: RYJ27_05045
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Entry
RYJ27_05045 CDS
T09965
Name
(GenBank) long-chain-fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00061
Fatty acid biosynthesis
mliy00071
Fatty acid degradation
mliy01100
Metabolic pathways
mliy01212
Fatty acid metabolism
mliy02024
Quorum sensing
mliy04146
Peroxisome
Module
mliy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RYJ27_05045
00071 Fatty acid degradation
RYJ27_05045
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RYJ27_05045
09145 Cellular community - prokaryotes
02024 Quorum sensing
RYJ27_05045
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
mliy01004
]
RYJ27_05045
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mliy04147
]
RYJ27_05045
Enzymes [BR:
mliy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RYJ27_05045
Lipid biosynthesis proteins [BR:
mliy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RYJ27_05045
Exosome [BR:
mliy04147
]
Exosomal proteins
Exosomal proteins of breast milk
RYJ27_05045
Exosomal proteins of breast cancer cells
RYJ27_05045
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
WOQ70574
UniProt:
A0AAU0MJY7
LinkDB
All DBs
Position
complement(1050625..1052325)
Genome browser
AA seq
566 aa
AA seq
DB search
MTTYDPPRPWIRSYAEGVPADLEPVSGSLVDIVTASARDYPDAPALQFFGRTMSYRELQD
QIERAAAGLRERGVRSGDPVAIVLPNCPQHIVAFYAVLRLGAVVVEHNPLYTPRELRKQF
EDHGAVHAIVWSKVAASVQAFPSDVAVRTLVSVDVTRAMPLRTRAALRLPVARARKAREA
LTARVSGAIPWETLLRSDPLPASVPAPGTDDLAIIQYTSGTTGTPKGAALTHRNLISNAA
QARAWVPSIRRGEGCVVYAVLPMFHAYGLTLCLTFAMSMGARLVLFPRFDPDMVLAVTKK
HPATFLPLVPPIADRLLTAARERGVSLEGTEVAISGAMALPHELVVPFEAATGGYLVEGY
GLSECSPVLMANPVAENRVPGTVGLPLPGTECRVVDPDDPTRDVDAGEAGELLVRGPQVF
GGYYGKPEETQHVFVDGWFRTGDIVTIDESGFVRIVDRIKELIITGGFNVAPTEVEIALR
QHPQVEDAAVVGLPSVHSGEEVVAAIVPAPGVSLDEESVREFARGILTPYKVPRRIFVVD
ELPKSLIGKVLRRQVRESLLQLTTGR
NT seq
1701 nt
NT seq
+upstream
nt +downstream
nt
gtgacgacgtacgatcccccgcgcccctggatccgaagctacgccgagggcgttcccgcc
gatctcgagcccgtctcgggctcgctggtcgacatcgtcacggcatccgcccgggactac
ccggacgctcccgccctgcagttcttcgggcgcacgatgtcataccgcgagctgcaggac
cagatcgagcgggccgcggccggacttcgcgagcggggggtccgatccggcgaccccgtc
gccatcgtcctgcccaactgtcctcagcacatcgtggcgttctacgccgtgttgaggctc
ggcgccgtcgtcgtcgagcacaacccgctctacacgccgcgcgaactgcgcaagcagttc
gaggaccacggcgccgtgcacgcgatcgtctggagcaaggtcgccgcatcggtgcaggcg
ttcccgtccgacgtcgcggtgcgcaccctcgtctccgtcgatgtgacgcgtgcgatgccc
ctgcgcacccgcgccgccctccgtctgcccgtcgccagggcccgtaaggcgcgcgaggca
ctcaccgctcgtgtgagcggtgcgatcccgtgggagacgctcctgcggagcgacccgctc
cccgcgagcgtgcctgcccccggcaccgacgacctggcgatcatccaatacaccagcggc
acgaccggcacccccaagggcgccgccctcacgcaccgcaacctcatctccaacgccgca
caggcgcgggcgtgggtgccctcgatccgccgcggtgagggatgcgtcgtctacgccgtg
ctcccgatgttccacgcctacggcctgacgctgtgtctcaccttcgcgatgtcgatgggg
gcgcgtctggtgctcttcccccgcttcgaccccgacatggtgctcgcggtgacgaagaag
caccccgcgaccttccttcccctcgtccccccgatcgccgaccggctgctgacggcggcg
cgggagcggggcgtctcgctcgagggaaccgaggtcgcgatctccggcgcgatggcgctg
ccccatgagctggtcgtgccgttcgaggcggcaacgggcggctacctcgtcgagggatac
ggcctgagcgagtgctcccccgtgctgatggcgaaccccgtcgccgagaaccgtgtcccg
ggcacggtggggcttccgctccccgggacggagtgccgcgtcgtcgatcccgacgacccc
acccgcgacgtggacgccggggaagccggcgagctgctcgtgcgcggtccgcaggtcttc
gggggctattacggaaagcccgaggagacgcagcacgtgttcgtggacggctggttccgc
accggcgacatcgtgacgatcgacgagtcgggattcgtgcgcatcgtcgaccgcataaag
gagctgatcatcacgggtggattcaacgtcgctcccaccgaggtcgagatcgcgctgcgc
cagcatccccaggtcgaggatgccgcggtcgtcggcctgccgagcgtgcactcgggcgag
gaggtcgtcgccgcgatcgtcccggcgcccggcgtatcgctcgacgaggagtccgtgcgg
gagttcgcgcgcggcatcctcacgccctacaaggtgccgcggcgcatattcgtggtcgac
gagctgccgaagtccctgatcggcaaggtactgcgccgccaggtgcgcgagtccctgctg
cagctgaccaccggccgctga
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