Microbacterium limosum: RYJ27_06490
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Entry
RYJ27_06490 CDS
T09965
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00220
Arginine biosynthesis
mliy00240
Pyrimidine metabolism
mliy00250
Alanine, aspartate and glutamate metabolism
mliy01100
Metabolic pathways
mliy01110
Biosynthesis of secondary metabolites
mliy01240
Biosynthesis of cofactors
Module
mliy_M00978
Ornithine-ammonia cycle
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
RYJ27_06490 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
RYJ27_06490 (carB)
00220 Arginine biosynthesis
RYJ27_06490 (carB)
Enzymes [BR:
mliy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
RYJ27_06490 (carB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D3
MGS
Dala_Dala_lig_C
ATPgrasp_Ter
ATP-grasp
ATP-grasp_5
ATP-grasp_4
CoA_binding_2
Motif
Other DBs
NCBI-ProteinID:
WOQ70829
UniProt:
A0AAU0MKN1
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All DBs
Position
1341426..1344713
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AA seq
1095 aa
AA seq
DB search
MPKRDDIKSVLVIGSGPIVIGQACEFDYSGTQACRVLREEGVRVILVNSNPATIMTDPDF
ADATYIEPITPAVIETIIAKERPDAILPTLGGQTALNAAMALDAAGILEKYDVELIGAKV
EAINKGEDRQIFKQLVIDAGADVAASRICRSMDEVLAGADELGYPLVVRPSFTMGGLGSG
FAYDEKDLRRIAGAGLHDSPTHEVLLEESILGWKEYELELMRDMADNTVVVCSIENVDPV
GVHTGDSITVAPALTLTDREYQKLRDIGIDIIRAVGVDTGGCNIQFAVDPASGRIIVIEM
NPRVSRSSALASKATGFPIAKIAAKLAIGYRLDEIPNDITKVTPASFEPTLDYVVVKVPR
FAFEKFPAADTTLTTTMKSVGEAMAIGRNYATALQKALRSLEKRGSSFHWGEEPRSVEEL
LEVSKTPTDGRIVVLQQAMRKGASIEQAFEATAIDPWFLDQIALINEVAEHVRTAPELDA
ATLRLAKEHGFSDAQLAQLRGMSEERVRERRYAAGIRPVYKTVDTCAGEFPALTPYHYSS
YDSETEVTPSERTKVVIIGSGPNRIGQGVEFDYSCVHASFALADAGYETVMVNCNPETVS
TDYDTSDRLYFEPLTLEDVLEVLHAEAASGEILGVVCQLGGQTPLGLAKGIQDAGYRILG
TSPEAIDLAEERELFSRLLDRAGLVAPRNGTATDVEGAVRIAEDIGYPVLVRPSFVLGGR
GMEIVYDTPSIRDYFVRIADQAIIGPGQPLLVDRFLDDAIEIDVDALYDGSELYIGGVME
HIEEAGIHSGDSSCTLPPISLGRTEIDRVREATLAIAEGVGVRGLLNVQFAISAGVLYVI
EANPRASRTVPFVSKALGIPLAKAASRIMAGTRIAELKDEGLLPAVDGSRVPLDSPVSVK
EAVLPFKRFRTKEGHIVDSVLGPEMRSTGEVMGIDRDFPTAFAKSQEAAYGGMPTSGTVF
ISVADSDKRAVILPAHRLRQLGFDLVATEGTAEILARNGIDVRIVAKYSETAGSSEPNIV
DLINAGEIDIVVNTPSGRSARADGYEIRAAAVAADKALFTTIAVLGAAVSAMDAIGDGFN
VRSLQEYAADRAARA
NT seq
3288 nt
NT seq
+upstream
nt +downstream
nt
atgcccaagcgcgacgacatcaagagcgtcctcgtcatcggctccggcccgatcgtcatc
ggccaggcctgcgaattcgactactcggggacccaggcctgccgcgttctgcgtgaggaa
ggcgtccgcgtcatcctcgtcaactcgaacccggcgacgatcatgaccgacccggacttc
gcggatgcgacgtacatcgagccgatcacccccgccgtcatcgagacgatcatcgccaag
gagcgacccgacgcgatcctgccgacgcttggcgggcagacggccctcaacgccgcgatg
gcgctcgacgcggccgggatcctggagaagtacgacgtcgagctgatcggcgcgaaggtc
gaagccatcaacaagggcgaggatcggcagatcttcaagcagctcgtcatcgacgcgggt
gcggatgtcgcggcgagccgcatctgccgctcgatggacgaggtgctggccggcgcggac
gagctcggataccccctcgtggtgcgcccgagcttcacgatgggcggtctcggctcgggc
ttcgcgtacgacgagaaggacctgcgccgcatcgcgggcgcgggactgcacgactcgccc
acccacgaggtgctgctcgaggagtcgatcctgggatggaaggagtacgagctcgagctc
atgcgcgacatggccgacaacacggtcgtcgtctgctcgatcgagaacgtcgatcccgtc
ggcgtgcacacgggcgactcgatcacggtcgccccggccctcacgctcaccgaccgtgag
taccagaagctccgcgatatcggcatcgacatcatccgcgccgtcggtgtggacaccggc
ggctgcaacatccagttcgcggtggacccggcctcgggacgcatcatcgtgatcgagatg
aacccccgcgtctcgcgctcgtcggccctggcgtcgaaggccacggggttcccgatcgcc
aagatcgccgccaagctcgcgatcgggtaccgcctcgacgagatcccgaacgacatcacc
aaggtgacgccggccagcttcgagcccacgctcgactacgtcgtggtcaaggttccccgc
ttcgcgttcgagaagttcccggccgccgacacgacgctgacgaccaccatgaagtcggtc
ggcgaggccatggcgatcggccgcaactacgccacggctcttcagaaggcgctgcgttcg
ctcgagaagcgcgggtcgagcttccactggggcgaggagccccgctcggtggaggagctg
ctcgaggtctccaagacgcccacggatgggcggatcgtcgtgctgcagcaggcgatgcgc
aagggcgcgagcatcgagcaggcgttcgaggcgacggcgatcgacccgtggttcctcgac
cagatcgcgctcatcaacgaggtcgccgagcacgtgcgcaccgccccggagctcgacgcc
gcgacgcttcggctggcgaaggagcacggcttctcggacgcccagctcgcgcagctgcgg
gggatgagcgaggagcgggtgcgcgagcggcgctatgccgccggcatccgccccgtctac
aagacggtcgacacctgcgcgggggagttcccggcgctcacgccctaccactactccagc
tacgacagcgagaccgaggtcaccccgtcggagcgcacgaaggtcgtcatcatcgggtcc
gggccgaaccgcatcgggcagggcgtcgagttcgactactcgtgcgtccacgcgtcgttc
gccctcgccgacgcgggatacgagaccgtcatggtcaactgcaacccggagaccgtctcg
acggactacgacacctccgaccgcctgtacttcgagccgctcacgctcgaggacgtgctc
gaggtgctgcacgccgaggcggcgtcgggcgagatcctcggggtcgtctgccagctgggc
ggccagacgccgctgggccttgccaagggcatccaggatgccggataccgcatcctcggc
acgagccccgaggcgatcgacctggccgaggagcgcgagctgttctcgcgcctgctcgac
cgcgcgggtctcgtcgcgccccgcaacggaacggccaccgacgtcgagggcgccgttcgc
atcgccgaggacatcggctaccccgtcctcgtccgccccagcttcgtgctgggcggccgc
gggatggagatcgtctacgacacccccagcatccgggactacttcgtgcggatcgccgat
caggcgattatcgggcccggacagccgttgctggtggaccgtttcctggacgacgcgatc
gagatcgacgtcgatgccctctacgacggctccgagctgtacatcgggggcgtcatggag
cacatcgaggaggcgggcatccactcgggtgactcgagctgcacgcttccgcccatctcg
ctcggccgcaccgagatcgaccgcgtccgcgaggcgacgctggcgatcgccgagggagtc
ggcgtgcggggccttctgaacgtgcagttcgccatcagcgcgggcgtgctgtacgtcatc
gaggccaacccccgcgccagccgcacggtgccgttcgtctcgaaggcgctcggcatcccg
ctcgccaaggccgcgtcgcgcatcatggccggcacgcgcatcgccgagttgaaggacgag
gggctgctgcccgccgtcgacggctcgcgcgtgccgctggactccccggtgtcggtgaag
gaggccgtcctgcccttcaagcgcttccgcacgaaggagggccacatcgtcgactccgtg
ctgggccccgagatgcgctcgacgggcgaggtcatggggatagaccgcgacttcccgacg
gcgttcgccaagagccaggaggcggcgtacggcggcatgccgacgtcggggaccgtgttc
atctcggtggccgacagcgacaagcgcgccgtcatcctgcccgcccaccgcctgcggcag
ctgggcttcgatctggtggcgacggagggcacggcggagatcctcgcccgcaacggcatc
gacgtgcgcatcgtggccaagtacagcgagacggccggctcgtccgagccgaacatcgtc
gacctgatcaacgcgggcgagatcgacatcgtcgtgaacaccccctcggggcggtcggcg
cgtgccgacggctacgagatccgcgccgccgcggtcgccgccgacaaggcactcttcacc
acgatcgcggtgctcggcgccgccgtcagcgcgatggacgcgatcggcgacgggttcaac
gtgaggagcctgcaggagtacgccgcggaccgggccgcacgagcgtga
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