Microbacterium limosum: RYJ27_06655
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Entry
RYJ27_06655 CDS
T09965
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
mliy
Microbacterium limosum
Pathway
mliy03030
DNA replication
mliy03410
Base excision repair
mliy03420
Nucleotide excision repair
mliy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RYJ27_06655 (polA)
03410 Base excision repair
RYJ27_06655 (polA)
03420 Nucleotide excision repair
RYJ27_06655 (polA)
03440 Homologous recombination
RYJ27_06655 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mliy03032
]
RYJ27_06655 (polA)
03400 DNA repair and recombination proteins [BR:
mliy03400
]
RYJ27_06655 (polA)
Enzymes [BR:
mliy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RYJ27_06655 (polA)
DNA replication proteins [BR:
mliy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
RYJ27_06655 (polA)
DNA repair and recombination proteins [BR:
mliy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
RYJ27_06655 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
RYJ27_06655 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
WOQ70859
UniProt:
A0AAU0MKR2
LinkDB
All DBs
Position
1377828..1380476
Genome browser
AA seq
882 aa
AA seq
DB search
MPDSAKPTLMVVDGHSLAYRAFFALPVENFTTKDHQHTNAIYGFLAMLINLIKAERPSHL
AVAFDTSRTSFRTREYAEYKANRSETPAEFKGQIPLLQECLAAMNIPVLQQEDIEADDIL
ATLATQGAADGFDVLVVSGDRDTIQLVTDDVTLLYPNVQGVSQLKRYDPAAVIEKYGLPP
EQYPDIAALVGETSDNLPGVPKVGEKTAVKWLTQFGSLDELLTRADEIKGVVGGNLREHL
DAVRRNRALNRLLTDVELPVTPADLEARAIDAQAVRDIFARLEFRTLLSRVFEAVGAEQP
GGSEPSADAPTAPAPREITDAEFADWIDAATANHPDGIALTFSAALDRAGLATATEAVEI
AWAGGAGASPALEGWLASASPKVMHDAKAQVKAIRRSGARVDGVVYDTLLAGWLLRPSFP
DKSLADLVERYLGESLPVADPNQLVPETDGATPGQQAWYILRVADALREESPEPVRRVLA
DIEMPTLSALADMELAGVSVSHDRLSGFSAELGARAEALAAEAYGIIGREFNLGSPKQLQ
EVLFDELALPKTRKTKTGYSTDAAVLADLQESNPHPFLDLLLQHREATKMRQIIESLDVA
IAADGRIHTTYVQTGSQTGRLSSTEPNLQNIPVRTDESRRIREAFQVGDGYEALLTADYS
QIEMRIMAHLSEDPGLIEAFNSGEDLHRFVGARVFGVSPDDVTPAMRTKVKAMSYGLVYG
LSAFGLSKQLRIEQSEAKELMTEYFARFGAVRDYLRGSVAQARIDGYTETIFGRRRPFPD
LGSPNRVLRENAERAALNAPIQGSAADIMKIALFHIHDALREEGLRSRILMQIHDELVVE
VAPGEWDAAARIVRERMGDAAHLSVPLDVQIGRGANWNEAAH
NT seq
2649 nt
NT seq
+upstream
nt +downstream
nt
gtgccggactccgcaaagcctaccctcatggtcgtcgacggccactcgctcgcctaccgg
gccttcttcgcccttcccgtcgagaatttcacgacgaaggaccaccagcacacgaacgcc
atctacggcttcctggcgatgctcatcaacctcatcaaggccgagcgcccgagccacctg
gcggtcgccttcgacacctcccgcacgtcgttccgcacgcgggagtacgccgaatacaag
gcgaaccgcagcgagacgcccgcggagttcaagggtcagatccctctcctgcaggagtgc
ctcgcggccatgaacatccccgtcctccagcaggaggacatcgaggccgacgacatcctc
gcgacgctcgccacgcagggcgcggccgacggcttcgacgtgctcgtcgtctccggcgac
cgcgacacgatccagctcgtcaccgacgacgtcaccctgctgtacccgaacgtgcagggg
gtctcgcagctgaagcgctacgacccggcagcggtgatcgagaagtacgggctcccgccc
gagcagtaccccgacatcgccgcgctcgtgggcgagacgagtgacaacctgcccggcgtg
ccgaaggtcggcgagaagacggcggtgaagtggctcacccagttcggttcgctcgatgag
ctcctgacccgggcggacgagatcaagggcgtcgtcggcggcaatctgcgcgaacacctg
gacgccgtccgccgcaaccgcgccctgaaccgcctgctcaccgacgtcgagctgccggtg
acccccgccgacctcgaggcgcgggcgatcgacgcgcaggccgtgcgcgacatcttcgct
cggctcgagttccgcacgctcctcagccgcgtgttcgaagcggtcggggccgaacagccc
ggcggatcggagccttcggccgacgcgccgaccgcgcccgcccctcgagagatcacggac
gccgagttcgccgactggatcgacgccgcgaccgcgaaccaccccgatgggatcgcgctc
accttctccgcggccctcgaccgcgcgggactcgcgacggcgacggaagccgtggagatt
gcctgggcgggcggggccggcgcgtcgccggcgctcgagggctggctcgcctcggcatcc
ccgaaggtcatgcacgacgcgaaggcgcaggtgaaggcgatccgtcggtccggggcgcgt
gtcgacggcgtcgtctacgacaccctcctcgcgggctggctgctgcgtccgagtttcccc
gacaagtccctcgccgatctcgtcgagcgatacctcggcgagagccttcccgtcgccgat
ccgaaccagctcgtcccggagaccgacggagccacaccgggacagcaggcgtggtacatc
ctccgcgtcgcggacgcgctgcgcgaggagtccccggagccggtgcgccgcgtgctcgcc
gacatcgagatgccgacgctgtctgcgctggccgacatggagctcgcgggcgtcagcgtg
tcgcacgacaggctgtccggcttctccgccgaactcggtgcccgggccgaggcgctcgcc
gccgaggcgtacggcatcatcggccgcgagttcaacctgggttcgccgaagcagctgcag
gaggtgcttttcgacgagctcgcgcttccgaagacccgcaagaccaagaccggatactcg
acggatgccgcggtcctggcggatctgcaggagagcaacccccacccgttcctcgacctg
ctgctgcagcaccgcgaggcgacgaagatgcggcagatcatcgagtcgctcgacgtcgcg
atcgccgcggacggtcgcatccacacgacctacgtgcagacggggagccagaccggccgg
ctctcgagcacggagccgaacctgcagaacatcccggtgcgcaccgacgaatcccgtcgc
atccgcgaagccttccaggtgggagacggatacgaggcgctcctcacggccgactactcg
cagatcgagatgcgcatcatggcgcacctctccgaggatcccgggctcatcgaggcgttc
aactccggcgaggacctccatcgcttcgtcggagcgcgcgtgttcggcgtgtcgcccgac
gatgtcacccccgccatgcgcaccaaggtcaaggcgatgtcctacgggctcgtgtacggc
ctctcggccttcggcctgtcgaagcagctgcgcatcgagcagtccgaggcgaaggagctc
atgaccgagtacttcgcgcgcttcggggcggtacgcgactacctgcgcggctccgtcgct
caggctcggatcgacgggtacaccgagacgatcttcggccggcgtcgtccgttccccgat
ctcggcagcccgaaccgggtgctacgcgagaacgccgagcgtgccgcccttaacgccccg
atccagggcagcgccgccgacatcatgaagatcgcgctgttccacatccacgacgcgctg
cgagaagagggtctgcgctcgcgcatcctgatgcagatccacgacgagctcgtcgtcgag
gtcgcgccgggggagtgggacgccgcggcgcgcatcgtgcgcgagaggatgggcgacgcg
gcgcacctgtcggtgccgctggacgtacagatcggccgcggagcgaactggaacgaggcg
gctcactga
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