Microbacterium limosum: RYJ27_08020
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Entry
RYJ27_08020 CDS
T09965
Symbol
truB
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
mliy
Microbacterium limosum
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mliy03016
]
RYJ27_08020 (truB)
Enzymes [BR:
mliy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
RYJ27_08020 (truB)
Transfer RNA biogenesis [BR:
mliy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RYJ27_08020 (truB)
Prokaryotic type
RYJ27_08020 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB_C
DUF2244
Motif
Other DBs
NCBI-ProteinID:
WOQ68667
UniProt:
A0AAU0MF80
LinkDB
All DBs
Position
complement(1650729..1651652)
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AA seq
307 aa
AA seq
DB search
MAPAAGVVLVDKAGGMTSHDVVARARRAFGTRKIGHAGTLDPMATGLLVLGVEAATRLLT
FVVGLDKTYHATILLGVTTDSDDADGEVTGRADHSSLDAVSDAAIAAGVASLTGRISQVP
SRVSAIKVAGRRAYDLARAGEDVVLEAREVTVSRFDAGAARRVPDGIELDVVVDCSSGTY
IRALARDLGAALGVGGHLTALRRTRVGAFSVDDAVRVDALDSALPIDPATVGARVLGRLD
VSAEEARDLRQGKRLAGASSRLGGGLRAAIDPAGLLVGVVEARGSDIKSVMNLPDPGRAT
SGTGEPG
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
atggcgccggctgccggggtggtgctggtcgacaaggcgggcgggatgacgagccacgac
gtcgtcgcgcgggcgcgccgtgccttcggcacccgcaagatcggccacgccggcacgctc
gatcccatggcgacgggcctcctcgtgctcggggtcgaagccgcgacccgactgctcacc
ttcgtcgtgggcctcgacaagacctaccacgcgaccatcctgctcggcgtgacgaccgac
agcgacgacgccgatggcgaggtcaccgggcgcgcggatcactcgtccctggacgccgtc
tccgacgcggcgatcgccgccggggtcgcgtcgctcacgggacgcatctcccaggtgccc
agccgcgtgtcggcgatcaaggtggccggacggcgcgcctacgacctcgctcgggccggc
gaggacgtcgtgctcgaggcccgcgaggtcacggtctcccggttcgatgcgggtgccgca
cggcgggttcccgacggcatcgagctggacgtcgtcgttgactgctccagcggtacgtac
atccgcgcgctcgcccgtgacctcggcgccgccctcggggtcggcggccatctgacggcg
ctgcgccggacccgtgtcggggccttctcggtcgacgatgccgtgcgggtcgacgctctg
gactcggcgctcccgatcgatcccgccacggtcggcgcccgggtgctgggccgcctggac
gtgtccgccgaggaggcgcgcgatctgcggcagggcaagcgcctggcgggcgcgtcgagc
cgcctggggggaggcctgcgggccgcgatcgatccggccgggttgctcgtcggagtggtc
gaggcgcgcggatccgacatcaagagcgtcatgaacctgcccgatccggggcgggcgacg
agcgggacgggagagccgggatga
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