Microbacterium limosum: RYJ27_08270
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Entry
RYJ27_08270 CDS
T09965
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mliy
Microbacterium limosum
Pathway
mliy03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
RYJ27_08270 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mliy03021
]
RYJ27_08270 (rho)
03019 Messenger RNA biogenesis [BR:
mliy03019
]
RYJ27_08270 (rho)
Transcription machinery [BR:
mliy03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
RYJ27_08270 (rho)
Messenger RNA biogenesis [BR:
mliy03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
RYJ27_08270 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
IF2_N
AAA_25
NACHT
Spore_III_AA
AAA_22
Mor
ResIII
Motif
Other DBs
NCBI-ProteinID:
WOQ68712
UniProt:
A0AAU0MFC6
LinkDB
All DBs
Position
complement(1705180..1707306)
Genome browser
AA seq
708 aa
AA seq
DB search
MESISEIQTEATDAQGDQASTDQAPAADTAAGEQNTAAEAAPAEQASDAPAEEATSEAPA
EGKRVRAPRKSERRPRVREVAADLGVDAKRVIAAAAELGVTLKSAQSAVDTELVARLATA
IQDADAAAEAPAEAQTPASAEAPAPAPAEAQTPASAEAPAPAEATAPDASGDASAAPAGS
TADESKQGSSSEGSSSEGSSQDASSNDGAATDDSSEGEQTGGRRNRNRNRNRNRGGAGGQ
NNGGGQNNGGGQKGGEAQNAPSAPGSAPSSSSPAPDADDDQRGQGRGRGRGRNKRGATGG
GASDEFDTEIGDDDVLIPIAGILDVLDNYAFVRTTGYLPGTSDVYVSLGQVKKYNLRKGD
AVVGAIKQPREGEQSGRQKYNALVKVDSINGLSPDDAATRVEFGKLTPLYPQERLRLETA
PEKLTQRIIDLVAPIGKGQRGLIVAPPKAGKTIVLQQIADAIAKNNPEVHLMVVLVDERP
EEVTDMQRSVRGEVIASTFDRPAEDHTTVAELAIERAKRLVELGRDVVVLLDSITRLGRA
YNISAPTSGRVLTGGVDASALYPPKRFFGAARNIENGGSLTILATALVETGSKMDEVIFE
EFKGTGNSELRLSRQLADKRIFPAVDVNASSTRREEMLLSADEVKITWKLRRALAGLDPQ
QALEVVLGKLKETSSNVEFLVQMQKSVPAPAREGHGGGHSHGHENNIR
NT seq
2127 nt
NT seq
+upstream
nt +downstream
nt
gtggagtccatctccgagatccagaccgaagccaccgacgcccagggcgaccaggcttcc
accgaccaggcgcccgcggccgacaccgccgccggcgagcagaacaccgcggctgaggcc
gcgcccgccgagcaggcatccgatgcccccgcggaggaggccacctccgaggctccggcc
gagggcaagcgggtgcgcgcgccccgcaagagcgagcggcgtccgcgggtgcgcgaggtc
gcggccgacctcggcgtcgacgccaagcgcgtcatcgccgcggccgccgagctcggcgtc
acgctgaagtccgcgcagtcggccgtcgacaccgagctggtcgcgcgcctcgcgaccgcc
atccaggacgccgacgcggccgcggaggcgcccgccgaggcgcagaccccggcatccgcg
gaggcgcccgcgcccgcgcccgccgaggcgcagaccccggcatccgccgaggcgcccgcg
cccgccgaggcgacggcgcccgacgcgtccggcgacgcgtccgcagcgcccgccggctcc
acggccgacgagtcgaagcagggttcgtcctccgagggttcgtcctccgagggctcctcc
caggacgcgtcgtcaaacgacggcgccgcgaccgacgactcgtccgagggcgagcagacc
ggtggtcgccgcaaccgcaaccgcaaccggaaccgcaaccgcggtggggcgggcggccag
aacaacggcggtggtcagaacaacggcggcggccagaagggcggcgaggcgcagaacgcc
ccgtccgcgcccggcagcgccccgtcatcctcgtcgcccgcgccggacgccgacgacgac
cagcgcggccagggtcgcggtcggggtcgcgggcgcaacaagcgcggcgcgaccggcggc
ggagcatcggacgagttcgacaccgagatcggcgacgacgacgtcctgatcccgatcgcg
ggcatcctcgacgtgctcgacaactacgccttcgtgcgcacgacgggctacctgcccggc
acgagcgacgtctacgtctccctcggtcaggtgaagaagtacaacctccgcaagggcgac
gccgtcgtcggcgccatcaagcagcctcgcgagggcgagcagtcgggccgccagaagtac
aacgcgctcgtgaaggtcgactcgatcaacggactgtcgcccgacgacgcggcgacgcgt
gtcgagttcggcaagctcacgccgctgtacccccaggagcgcctgcgcctggagacggcg
cccgagaagctcacccagcggatcatcgatctcgtggcgcccatcggcaagggccagcgc
ggcctcatcgtcgccccgcccaaggccggcaagacgatcgtgctgcagcagatcgccgac
gcgatcgcgaagaacaaccccgaggtccacctcatggtcgtcctcgtcgacgagcgcccc
gaagaggtgaccgacatgcagcgctcggtgcgcggcgaggtcatcgcctcgacgttcgac
cgtcccgccgaagaccacacgacggtcgccgagctcgcgatcgagcgcgccaagcggctc
gtcgagctgggccgcgacgtcgtcgtgctgctcgactccatcacccgcctcgggcgcgcg
tacaacatctcggcccccacgtccggccgtgtgctgacgggaggcgtcgacgcgtcggcg
ctctacccgcccaagcgcttcttcggcgccgcgcgcaacatcgagaacggcggatcgctc
acgatcctcgcgacggcgctcgtggagaccgggtccaagatggacgaggtcatcttcgag
gagttcaagggcaccggcaacagcgagctgcgcctgtctcgccagctcgccgacaagcgc
atcttccccgcggtggacgtgaacgcgtcgtccacccgtcgcgaggagatgctgctctcg
gccgacgaggtcaagatcacgtggaagctgcgtcgcgccctcgcgggcctcgacccgcag
caggcgctcgaggtcgtccttggcaagctcaaggagaccagctccaacgtcgagttcctc
gtgcagatgcagaagtcggtccccgcccccgcgcgcgaggggcacggcggcggtcacagc
cacgggcacgagaacaacatccgctga
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