Microbacterium limosum: RYJ27_09130
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Entry
RYJ27_09130 CDS
T09965
Symbol
sdhA
Name
(GenBank) succinate dehydrogenase flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00020
Citrate cycle (TCA cycle)
mliy00190
Oxidative phosphorylation
mliy00650
Butanoate metabolism
mliy00720
Other carbon fixation pathways
mliy01100
Metabolic pathways
mliy01110
Biosynthesis of secondary metabolites
mliy01120
Microbial metabolism in diverse environments
mliy01200
Carbon metabolism
Module
mliy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mliy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mliy_M00149
Succinate dehydrogenase, prokaryotes
mliy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RYJ27_09130 (sdhA)
00650 Butanoate metabolism
RYJ27_09130 (sdhA)
09102 Energy metabolism
00190 Oxidative phosphorylation
RYJ27_09130 (sdhA)
00720 Other carbon fixation pathways
RYJ27_09130 (sdhA)
Enzymes [BR:
mliy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RYJ27_09130 (sdhA)
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Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
Thi4
HI0933_like
Pyr_redox_2
DAO
Motif
Other DBs
NCBI-ProteinID:
WOQ68871
UniProt:
A0AAU0MEI6
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All DBs
Position
1897000..1898826
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AA seq
608 aa
AA seq
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MTTPAPTGTAPTGVHHHQFDIVIVGAGGAGMRAAIEAGPHAKTAVISKLYPTRSHTGAAQ
GGMAAALANVEEDSWEWHTFDTVKGGDYLVDQDAAEILAKEAIDAVIDLENMGLPFNRTP
EGKIDQRRFGGHTADHGKSPVRRACYAADRTGHMILQTLFQNCVKLGINFFNEFYVLDLI
TTKDAAGKTQVAGVVAYDLASGELHVFHAKAVIFATGGFGKIYKTTSNAHTLTGDGVGIV
WRKGLPLEDMEFFQFHPTGLAGLGILLTEGARGEGAILRNVSGERFMERYAPTIKDLAPR
DIVSRCMQQEVAEGRGAGPHRDYVLLDCTHLGAEVLETKLPDITEFARTYLGVDPVVEPV
PVMPTAHYAMGGIPTNVAAEVLADNETVVPGLYAAGECACVSVHGSNRLGTNSLLDINVF
GKRAGRNAVEYVKTADFVPLPENPAGAVHDMIEGLRAGTGTERIAVLRKKLQDEMDKGAQ
VFRTEESLTHVLGVIEELRERYRNIHVDDKGKRFNTDLLEAVELGFLLDIAEVVVVTARN
RKESRGGHMRDDFPGRDDEAYMKHTMAYLSGDPNSSTADDHIRLDWKPVVFTKNEAGELR
YPPLERKY
NT seq
1827 nt
NT seq
+upstream
nt +downstream
nt
gtgacgaccccagccccgaccgggaccgcgccgaccggcgtgcaccaccaccagttcgac
atcgtcatcgtcggcgccggcggcgccggcatgcgcgccgcgatcgaggcgggcccgcac
gcgaagaccgcggtgatctccaagctgtaccccacgcgctcccacaccggcgcagcgcag
ggcggaatggcggcggccctggcgaacgtcgaagaggactcgtgggagtggcacaccttc
gacaccgtcaagggcggcgactacctcgtcgaccaggacgcggccgagatcctcgcgaag
gaggccatcgacgcggtcatcgacctcgagaacatgggcctgcccttcaaccgcaccccc
gaaggcaagatcgaccagcgccgcttcggcggccacaccgccgaccacgggaagtcgccc
gtgcgccgcgcatgctacgccgccgaccgcaccggccacatgatcctgcagacgctgttc
cagaactgcgtcaagctcggcatcaacttcttcaacgagttctacgtcctcgacctcatc
acgacgaaggatgccgcgggcaagacgcaggtcgccggcgtcgtcgcctacgatctcgcg
tccggcgagctgcacgtcttccacgccaaggccgtgatcttcgccacgggcggcttcggc
aagatctacaagacgacctcgaacgcccatacgctcaccggcgacggcgtcggcatcgtg
tggcgcaagggcctgccgctcgaggacatggagttcttccagttccaccccaccgggctc
gcgggcctcggcatcctgctcaccgagggcgcccgcggcgagggcgcgatcctgcgcaac
gtctcgggcgagcgcttcatggagcgttacgcccccaccatcaaggacctcgcgccccgc
gacatcgtcagccgatgcatgcagcaggaggtcgccgaaggccgcggcgccggcccgcac
cgcgactacgtgctgctggactgcacgcacctgggcgccgaggtgctcgagacgaagctc
cccgacatcacggagttcgcccgcacctacctgggggtcgaccccgtcgtcgagcccgtt
cccgtcatgcccaccgcgcactacgcgatgggcggcatccccaccaacgtcgccgccgag
gtgctcgccgacaacgagaccgtcgtcccggggctctacgccgccggcgagtgcgcgtgc
gtgtcggtgcacggatcgaaccgcctcggcaccaactcgctgctcgacatcaacgtcttc
ggcaagcgcgccggccgcaacgcggtcgaatacgtcaagacggccgacttcgtgccgctg
cccgagaaccccgcgggcgccgtgcacgacatgatcgagggcctgcgcgccggcaccggc
accgagcgcatcgccgtgctgcgcaagaagctgcaggacgagatggacaagggcgcccag
gtgttccgcaccgaggagtcgctcacgcacgtgctcggcgtcatcgaggagctgcgcgag
cgctaccggaacatccacgtcgacgacaagggcaagcggttcaacaccgacctgctcgag
gccgtcgagctcggcttcctcctcgacatcgccgaggtcgtcgtcgtcaccgcccgcaac
cgcaaggagagccgcggcggacacatgcgcgacgacttcccggggcgcgacgacgaggcc
tacatgaagcacacgatggcctacctgagcggcgacccgaactcgtcgacggcggacgac
cacatccggctcgactggaagcccgtcgtcttcacgaagaacgaagccggcgagttgcgt
tacccgccgttggagaggaagtactga
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