Microbacterium limosum: RYJ27_09135
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Entry
RYJ27_09135 CDS
T09965
Name
(GenBank) succinate dehydrogenase iron-sulfur subunit
KO
K00240
succinate dehydrogenase iron-sulfur subunit [EC:
1.3.5.1
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00020
Citrate cycle (TCA cycle)
mliy00190
Oxidative phosphorylation
mliy00650
Butanoate metabolism
mliy00720
Other carbon fixation pathways
mliy01100
Metabolic pathways
mliy01110
Biosynthesis of secondary metabolites
mliy01120
Microbial metabolism in diverse environments
mliy01200
Carbon metabolism
Module
mliy_M00009
Citrate cycle (TCA cycle, Krebs cycle)
mliy_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
mliy_M00149
Succinate dehydrogenase, prokaryotes
mliy_M00982
Methylcitrate cycle
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
RYJ27_09135
00650 Butanoate metabolism
RYJ27_09135
09102 Energy metabolism
00190 Oxidative phosphorylation
RYJ27_09135
00720 Other carbon fixation pathways
RYJ27_09135
Enzymes [BR:
mliy01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
RYJ27_09135
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Gene cluster
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Motif
Pfam:
Fer2_3
Fer4_10
Fer4_8
Fer4_17
Fer4_9
Fer4_7
Fer4
Fer4_16
Fer4_2
Fer4_20
Fer4_6
Fer4_4
Fer4_21
Fer4_3
Motif
Other DBs
NCBI-ProteinID:
WOQ68872
UniProt:
A0AAU0MEM0
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Position
1898826..1899602
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AA seq
258 aa
AA seq
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MSQAIVDSAEAPAEPEVTADTGIQSFLVTFIVRRFDPEVDEEPRWVDYDVEMYSTDRVLD
ALHKIKWEVDGSLSFRRSCAHGICGSDAMRINGRNRLACKTLIKDLDISRPIYVEAIKGL
PLEKDLIVDMEPFFASYREVQPFLISNSAPEPGKERVQSIANREIFDDTTKCILCAACTS
SCPVFWTDGQYFGPAAIVNAHRFIFDSRDDAGDVRLDILNDKEGVWRCRTTFNCSEACPR
GIQVTKAIAEVKQAVLRG
NT seq
777 nt
NT seq
+upstream
nt +downstream
nt
atgtcccaggcgatcgtcgactccgctgaggcaccggccgagcccgaggtcacggccgac
accggcatccagtcgttcctcgtcaccttcatcgtgcgccgcttcgaccccgaggtcgac
gaggagccgcgctgggtcgactacgacgtcgagatgtactccaccgatcgtgtgctcgac
gcgctgcacaagatcaagtgggaggtcgacgggtcgctgtcgttccgccggtcgtgcgcc
cacggtatctgcgggtccgacgcgatgcgcatcaacggccgcaaccgcctggcgtgcaag
acgctcatcaaggacctcgacatctcgcggcccatctatgtcgaggcgatcaagggcctg
ccgctggagaaggacctgatcgtcgacatggagccgttcttcgcctcctaccgcgaggtg
cagccgttcctcatctccaactccgcgccggagcccggcaaggagcgcgtgcagtcgatc
gccaaccgcgagatcttcgacgacaccaccaagtgcatcctgtgcgccgcgtgcacgtcc
tcgtgccccgtgttctggaccgacgggcagtacttcggcccggcggcgatcgtcaacgcg
caccggttcatcttcgactcgcgcgacgacgcgggcgacgttcgtctcgacatcctcaac
gacaaggagggcgtgtggcgctgccgcacgaccttcaactgctccgaggcgtgcccccgc
ggcatccaggtgaccaaggcgatcgccgaggtcaagcaggcggtcctgcgcggctga
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