Microbacterium limosum: RYJ27_09375
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Entry
RYJ27_09375 CDS
T09965
Name
(GenBank) 3'-5' exonuclease
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
mliy
Microbacterium limosum
Pathway
mliy03030
DNA replication
mliy03430
Mismatch repair
mliy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RYJ27_09375
03430 Mismatch repair
RYJ27_09375
03440 Homologous recombination
RYJ27_09375
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
mliy03032
]
RYJ27_09375
03400 DNA repair and recombination proteins [BR:
mliy03400
]
RYJ27_09375
Enzymes [BR:
mliy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RYJ27_09375
DNA replication proteins [BR:
mliy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RYJ27_09375
DNA repair and recombination proteins [BR:
mliy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RYJ27_09375
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
WOQ68918
UniProt:
A0AAU0MEP1
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All DBs
Position
1946982..1947572
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AA seq
196 aa
AA seq
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MSLDFTAIDFETANSSTASACAVGMVRVRGGRVVARAGWLIQPPPGHDAFAPVNIGIHGI
RAEDVVGAKGWSAQLDDLCAFAGADVLVAHNAGFDMNVIRRACEATGDACPPYRYLCSLQ
LARRSYELDSYRLPRVAAAAGFADFAHHDARADAEACAHIVVDAARRHGARDVPTLVAVA
GVRISALAAAAAARVA
NT seq
591 nt
NT seq
+upstream
nt +downstream
nt
gtgtccctggatttcaccgcgatcgacttcgagacggcgaattccagcaccgcgtcggcc
tgcgccgtcgggatggtgcgcgtccggggagggcgcgtcgtcgcccgcgcgggatggctc
atccagccgccgcccggccacgacgcgttcgcccccgtcaacatcggcatccacggcatc
cgggccgaggacgtcgtcggggcgaaggggtggagcgcccagctggacgacctctgcgcc
ttcgcgggcgccgacgtgctcgtggcccacaacgccggcttcgacatgaacgtcatccga
cgggcctgcgaggccaccggcgacgcgtgcccgccctatcgctacctgtgctccctgcag
ctggcgcgccgctcctacgagctggactcctaccgcctcccccgcgtcgcggcggccgcg
ggcttcgccgatttcgcccaccacgacgcgcgggccgacgcggaggcgtgcgcgcacatc
gtcgtggatgccgcgcgtcggcacggcgcgcgggacgtgccgacgctggtcgccgtcgcg
ggcgtgcggatctccgcgctcgccgccgccgcggccgcacgggtggcctga
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