KEGG   Microbacterium limosum: RYJ27_09375
Entry
RYJ27_09375       CDS       T09965                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
mliy  Microbacterium limosum
Pathway
mliy03030  DNA replication
mliy03430  Mismatch repair
mliy03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:mliy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    RYJ27_09375
   03430 Mismatch repair
    RYJ27_09375
   03440 Homologous recombination
    RYJ27_09375
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:mliy03032]
    RYJ27_09375
   03400 DNA repair and recombination proteins [BR:mliy03400]
    RYJ27_09375
Enzymes [BR:mliy01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     RYJ27_09375
DNA replication proteins [BR:mliy03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     RYJ27_09375
DNA repair and recombination proteins [BR:mliy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     RYJ27_09375
SSDB
Motif
Pfam: RNase_T Rv2179c-like
Other DBs
NCBI-ProteinID: WOQ68918
UniProt: A0AAU0MEP1
LinkDB
Position
1946982..1947572
AA seq 196 aa
MSLDFTAIDFETANSSTASACAVGMVRVRGGRVVARAGWLIQPPPGHDAFAPVNIGIHGI
RAEDVVGAKGWSAQLDDLCAFAGADVLVAHNAGFDMNVIRRACEATGDACPPYRYLCSLQ
LARRSYELDSYRLPRVAAAAGFADFAHHDARADAEACAHIVVDAARRHGARDVPTLVAVA
GVRISALAAAAAARVA
NT seq 591 nt   +upstreamnt  +downstreamnt
gtgtccctggatttcaccgcgatcgacttcgagacggcgaattccagcaccgcgtcggcc
tgcgccgtcgggatggtgcgcgtccggggagggcgcgtcgtcgcccgcgcgggatggctc
atccagccgccgcccggccacgacgcgttcgcccccgtcaacatcggcatccacggcatc
cgggccgaggacgtcgtcggggcgaaggggtggagcgcccagctggacgacctctgcgcc
ttcgcgggcgccgacgtgctcgtggcccacaacgccggcttcgacatgaacgtcatccga
cgggcctgcgaggccaccggcgacgcgtgcccgccctatcgctacctgtgctccctgcag
ctggcgcgccgctcctacgagctggactcctaccgcctcccccgcgtcgcggcggccgcg
ggcttcgccgatttcgcccaccacgacgcgcgggccgacgcggaggcgtgcgcgcacatc
gtcgtggatgccgcgcgtcggcacggcgcgcgggacgtgccgacgctggtcgccgtcgcg
ggcgtgcggatctccgcgctcgccgccgccgcggccgcacgggtggcctga

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