KEGG   Microbacterium limosum: RYJ27_09415
Entry
RYJ27_09415       CDS       T09965                                 
Symbol
xseA
Name
(GenBank) exodeoxyribonuclease VII large subunit
  KO
K03601  exodeoxyribonuclease VII large subunit [EC:3.1.11.6]
Organism
mliy  Microbacterium limosum
Pathway
mliy03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:mliy00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03430 Mismatch repair
    RYJ27_09415 (xseA)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:mliy03400]
    RYJ27_09415 (xseA)
Enzymes [BR:mliy01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.6  exodeoxyribonuclease VII
     RYJ27_09415 (xseA)
DNA repair and recombination proteins [BR:mliy03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA exonucleases
     RYJ27_09415 (xseA)
SSDB
Motif
Pfam: Exonuc_VII_L tRNA_anti_2 Chap-C tRNA_anti-codon TMP_4
Other DBs
NCBI-ProteinID: WOQ68925
UniProt: A0AAU0MFH7
LinkDB
Position
1953861..1955129
AA seq 422 aa
MTTFQPAVADGEQPPADSVHPRESSPQAPTSVSRLNETIRGFVEKWGSVWVEGEITSWNV
RGGNVFGRLKDRGTDATLSFRLWSSTRSRLTEDMAVGDHIVTCIKPDYFVRSGDFSFTVS
AMRHVGLGEQLEKLERLRAALRAEGLFDQARKRPLPFLPHVIGLITGERSDAEKDVHRNA
ELRWPQVRFRTIHAAVQGDRCVPETIGALRRLDADADVDVIIIARGGGDPQTLLGFSDER
LLRAVAAASTPVVSAIGHENDHPLLDDVADLRASTPTDAAKRVVPDVSEQRAMVAQLRAR
LGSRLQQRVAHDIAQLEQLRSRPVLRAPERGLDERAAQVAQAIGRGRAAVDRLMAHADRR
SAELRATLRALSPQHTLDRGYAIVQMNDRIVRDPRDAPEGAEGFVRVANGQFAVRSLGGT
AP
NT seq 1269 nt   +upstreamnt  +downstreamnt
atgacgacgttccagcccgccgtcgcagacggcgaacagccccccgccgactccgtgcac
ccgcgcgagtcgagcccgcaggcccccacgtcggtctcacggctgaacgagaccatccgc
ggcttcgtggagaaatggggctcggtctgggtcgagggcgagatcacctcctggaacgta
cgcggcgggaacgtgttcggccgtctcaaggaccgcgggaccgacgcgacgctgtcgttc
cgcctgtggtcgagcacacgctcgcgcctgaccgaggacatggcggtcggcgaccatatc
gtgacctgcatcaagccggactacttcgtccgctcgggcgatttctccttcaccgtgtcc
gcgatgcggcacgtcggcctcggcgagcagctcgagaagctcgaacgacttcgcgcggcg
ctgcgcgcggaaggcctgttcgatcaggcccgcaagaggccgctgccgttcctgccccac
gtcatcgggctgatcaccggcgagcgctcggacgccgagaaggacgtgcaccgcaacgcc
gagctgcggtggccgcaggtccgcttccgcacgatccacgccgccgtccagggcgatcgc
tgcgtccccgagacgatcggcgcgctccggcggctcgacgccgacgccgacgtcgacgtc
atcatcatcgcgcgcggcggcggcgacccgcagacactcctcggcttcagcgacgagcgg
ctgctgcgggccgttgccgcggcatccaccccggtcgtcagcgcgatcgggcacgagaac
gaccaccccctgctcgacgacgtcgccgacctgcgcgcgtcgacgccgacggatgccgcc
aagcgcgtcgtgcccgacgtctccgagcagcgggccatggtcgcccagctgcgggcccgc
ctgggctcccggctgcagcagcgggtggcccacgacatcgcgcagctggagcaactgcgc
tcgcggcccgtgctgcgcgcgcccgagcgcgggctcgacgaacgcgccgcgcaggtcgcg
caggcgatcgggcggggacgcgccgccgtggatcgcctcatggcgcacgccgaccgccgg
tccgccgagctgcgcgccaccctgcgcgcgctgagcccgcagcacacgctcgaccgcgga
tacgcgatcgtccagatgaacgaccgcatcgtgcgcgatccccgcgacgccccggagggc
gcggagggattcgtgcgcgtcgcgaacggtcagttcgccgtgcgctcgctcggcggcacg
gcaccgtga

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