Microbacterium limosum: RYJ27_10575
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Entry
RYJ27_10575 CDS
T09965
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
mliy
Microbacterium limosum
Pathway
mliy00260
Glycine, serine and threonine metabolism
mliy00460
Cyanoamino acid metabolism
mliy00630
Glyoxylate and dicarboxylate metabolism
mliy00670
One carbon pool by folate
mliy00680
Methane metabolism
mliy01100
Metabolic pathways
mliy01110
Biosynthesis of secondary metabolites
mliy01120
Microbial metabolism in diverse environments
mliy01200
Carbon metabolism
mliy01230
Biosynthesis of amino acids
mliy01240
Biosynthesis of cofactors
mliy04981
Folate transport and metabolism
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RYJ27_10575 (glyA)
09102 Energy metabolism
00680 Methane metabolism
RYJ27_10575 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
RYJ27_10575 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
RYJ27_10575 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
RYJ27_10575 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
RYJ27_10575 (glyA)
Enzymes [BR:
mliy01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
RYJ27_10575 (glyA)
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Motif
Pfam:
SHMT
DegT_DnrJ_EryC1
Motif
Other DBs
NCBI-ProteinID:
WOQ69136
UniProt:
A0AAU0MFT3
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Position
complement(2189519..2190793)
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AA seq
424 aa
AA seq
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MTDPLFTAPLAEVDPEIAQVLERELDRQRGYLEMIASENFVPVSVLQSQGSVLTNKYAEG
YPGRRYYGGCEEVDIAEELAIERAKSLFGAAFANVQPHSGATANAAVLHAIARPGDTILG
LSLDHGGHLTHGMKINFSGRLYDIVAYGVDPETSLVDMDEVRRLALEHSPKVIIAGWSAY
PRQLDFAAFRAIADEVGAYLWVDMAHFAGLVAAGIHPSPVPHAHVVSSTVHKTIGGPRSG
FILTNDEGLAKKINTAVFPGQQGGPLMHVIAAKATAFKIAASDAFRDRQERTLRGARLLA
ERLSQPDVAAAGISVRSGGTDVHLVLVDLRDAQIDGRQAEDLLHEIHITVNRNAVPNDPR
PPMVTSGLRIGTPALATRGFGDAEFAEVADVIALALLPGADVEALRDRVAALADAFPLYP
GLQQ
NT seq
1275 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacccgctcttcaccgccccgctcgccgaggtcgatcccgagatcgcgcaggtg
ctcgagcgcgagctcgaccgtcagcgcggatacctcgagatgatcgcgtccgagaacttc
gtgcccgtctccgtgctgcagtcgcaggggtcggtgctgacgaacaagtacgccgagggc
tatccgggccgccgctactacggcggctgcgaagaggtcgacatcgccgaggagctcgcg
atcgagcgggcgaaatccctgttcggcgccgcgttcgcgaacgtccagccgcactccggc
gcgaccgccaacgccgccgtcctccacgccatcgcccgccccggcgacacgatcctgggc
ctctcgctcgatcacggcggacacctcacgcacggcatgaagatcaacttctcgggccgg
ttgtacgacatcgtcgcgtacggcgtcgaccccgagacgtcgctcgtcgacatggacgag
gtgcgccgcctggcgctcgagcacagccccaaggtcatcatcgcgggctggtcggcctac
ccgcgccagctcgacttcgccgccttccgcgcgatcgccgacgaggtcggggcatacctc
tgggtggacatggcccacttcgcgggtctcgtggccgccggcatccacccctcgcccgtg
ccgcacgcgcacgtggtctcctccaccgtgcacaagacgatcggcggtccgcggtcgggc
ttcatcctcaccaacgacgagggcctggccaagaagatcaacaccgccgtgttccccggg
cagcagggcggtccgctcatgcacgtgatcgcggcgaaggcgacggcgttcaagatcgcc
gcgtccgacgcgttccgcgatcgtcaggagcgcaccctgcgcggtgcccgcctgctcgcc
gagcggctgtcgcagccggatgtcgcggcggcgggcatctcggtccgttcgggcggcacc
gacgtgcacctcgtgctcgtcgacctgcgcgacgcgcagatcgacggcaggcaggccgaa
gacctgctgcacgagatccacatcacggtcaatcgcaacgcggtgccgaacgaccctcgc
cccccgatggtcacgtcgggtcttcgcatcggcacgccggcgctcgcgacgcgcgggttc
ggcgacgccgagttcgccgaggtggccgacgtcatcgcgctcgcgctgctgccgggtgcc
gacgtcgaggccctccgtgaccgcgtcgcggccctcgcggacgccttccctctgtatccg
ggtctgcagcagtag
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