Microbacterium limosum: RYJ27_11285
Help
Entry
RYJ27_11285 CDS
T09965
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
mliy
Microbacterium limosum
Brite
KEGG Orthology (KO) [BR:
mliy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
mliy03016
]
RYJ27_11285 (truA)
Enzymes [BR:
mliy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
RYJ27_11285 (truA)
Transfer RNA biogenesis [BR:
mliy03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
RYJ27_11285 (truA)
Prokaryotic type
RYJ27_11285 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF7541
Motif
Other DBs
NCBI-ProteinID:
WOQ69269
UniProt:
A0AAU0MG49
LinkDB
All DBs
Position
complement(2335997..2336839)
Genome browser
AA seq
280 aa
AA seq
DB search
MRIRLDIAYDGTHFAGWARQPGLRTVQGALETALQRVLRSPAAPRLVVAGRTDAGVHATG
QVAHVDVAPDDIERLHRPRDTRPPLDQLAHRLRGVLGAYSDVTVRAATAAPEGFDARFSP
VWRRYVYRIADAASGYDPLRRHDTTSVRASLDAAAMDAAASSLRGLHDFAAYCRPREGAT
TIRTLLDYTWRRLPDGVLEAEVRADAFCHSMVRALVGVCAAIGEGRLDVEDAARLRDERT
RSSAFPVLAARGLTLAEVGYPASDLLAERAAQTRARRELG
NT seq
843 nt
NT seq
+upstream
nt +downstream
nt
gtgcggatccgcctcgacatcgcctacgacggcacgcacttcgccgggtgggcgcgccag
cccggactgcggacggtgcagggagcgctcgagaccgcgctgcagcgggtgctgcgcagc
ccggccgcgccgcgcctggtcgttgccggacgcacggatgccggcgtgcacgccacaggg
caggtcgcgcacgtcgatgtcgcccccgatgacatcgagcgactccaccgccctcgtgac
acgcgtcccccgctcgatcagctcgcgcatcgcctccggggggtgctcggggcgtactcc
gacgtgacggtgcgcgccgcgaccgcggcccccgaggggttcgacgcccgcttctcgccc
gtctggaggcgctacgtctaccgcatcgccgatgcggcctccggctacgatccgctccgc
cgtcatgacaccacctcggtgcgggcgtcgctcgacgcggctgcgatggatgccgcggca
tccagccttcgagggcttcatgacttcgcggcctactgccgcccccgagagggggccacg
acgatccggacactgctggactacacctggcggagactgcccgacggcgtgctcgaggcc
gaggtgcgggccgacgccttctgccacagcatggtgcgcgccctcgtcggcgtgtgcgcg
gcgatcggagaggggcgcctggacgtcgaggatgccgcgcgccttcgcgacgagaggact
cgatcgagcgcctttccggtgctcgccgcccggggactcaccctggccgaggtgggctac
cccgcatcagatctcctcgcggaacgcgcggcccagacgcgcgcacggcgcgaactgggg
tga
DBGET
integrated database retrieval system
