Mycobacterium lacus: MLAC_09650
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Entry
MLAC_09650 CDS
T07377
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
mlj
Mycobacterium lacus
Pathway
mlj03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlj00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
MLAC_09650 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlj03021
]
MLAC_09650 (rho)
03019 Messenger RNA biogenesis [BR:
mlj03019
]
MLAC_09650 (rho)
Transcription machinery [BR:
mlj03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
MLAC_09650 (rho)
Messenger RNA biogenesis [BR:
mlj03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
MLAC_09650 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ATP-synt_ab
Rho_RNA_bind
Rho_N
Spore_III_AA
AAA_25
NACHT
VWA_2
AAA_22
Fungal_virus_P2_C
Motif
Other DBs
NCBI-ProteinID:
BBX95671
UniProt:
A0A1X1YGT1
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All DBs
Position
1007777..1009555
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AA seq
592 aa
AA seq
DB search
MTDTDLITANESNDSDTQSNPVITDTPKAKINASDGALATMVLPELRALANRAGVKGTSG
MRKNELIAAIREIRGQANGTAAADGSDPPASAQAPAAEKAPGARGEQTDSSAEVPRRERR
VASREAGSATGERTDVADSTQPGQQATKTEEGGPDTGGEQAGDQQGPGGQQPRGDEDGEG
RQGRRGRRFRDRRRRGERSGDGVETELREDDVVQPVAGILDVLDNYAFVRTSGYLAGPHD
VYVSMNMVRKNGLRRGDAVTGAVRVPRDGEQPNQRQKFNPLVRLDSVNGGPVEDAKKRPE
FGKLTPLYPNQRLRLETATERLTTRVIDLIMPIGKGQRALIVSPPKAGKTTILQDIANAI
TKNNPECHLMVVLVDERPEEVTDMQRSVKGEVIASTFDRPPSDHTSVAELAIERAKRLVE
QGKDVVVLLDSITRLGRAYNNASPASGRILSGGVDSTALYPPKRFLGAARNIEEGGSLTI
IATAMVETGSTGDTVIFEEFKGTGNAELKLDRKIAERRVFPAVDVNPSGTRKDELLLSPD
EFAIVHKLRRVLSGLDSHQAIDLLMSQLRKTKNNYEFLVQVSKTTPGSMDND
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
gtgactgatacggacctcatcacggctaatgaaagcaacgacagcgatacgcagtcgaat
cccgtgattacagacacgcccaaggcgaagatcaacgcgtcggatggcgcgctggccacc
atggtgctgcccgaactgcgtgcgctagccaatcgagctggcgtcaaggggacgtcgggc
atgcgcaagaacgaactgatcgccgcgattcgggaaatcaggggacaggccaacggcaca
gcagctgccgacggctcggacccaccggcgagtgcccaagcaccggctgccgaaaaagca
ccgggtgcccgaggggaacagaccgattcatcggccgaggtgccacgccgggaacgacgc
gtcgcctcgcgcgaggcgggatctgccaccggcgagcgcaccgacgtggctgacagcacc
cagccaggccaacaggccaccaagaccgaggagggcggccccgacacgggtggcgaacag
gctggtgaccagcaagggccgggcggccagcagccacgcggcgacgaggacggcgaaggg
cgtcaggggcggcggggacgccggttccgcgaccgcaggcgccgcggtgaacggtccggc
gatggcgtcgagaccgaactgcgcgaggacgacgtcgtccagccggtagccggaatcctt
gacgtcctcgacaattacgcgttcgtccgcacctccggttacctggcgggtccgcacgac
gtgtacgtgtcgatgaacatggtgcgcaagaacggccttcgccgcggtgacgcggtgacc
ggcgcggttcgggtgccccgagacggtgaacagcccaaccaacggcagaagttcaacccg
ctggtccgcctggacagcgtcaatggcggcccggttgaagacgccaagaagcggcccgaa
ttcggcaaactgacgccgctgtacccgaaccagcggctgcgtctggaaaccgctaccgag
cggctgaccacgcgggtcatcgacctcatcatgccgattggtaagggccagcgtgccctg
atcgtgtcgccgcccaaggcgggtaagacgacgatcttgcaggacatcgccaacgcgatc
accaagaacaacccggaatgccacctgatggtcgtcctcgtcgatgagcgccccgaggag
gtcaccgacatgcagcgctcggtcaagggcgaggtgatcgcctcgacgttcgaccggccg
ccgtcggaccacacctcggtggccgagctggcgatcgagcgcgccaagcggctcgtcgag
cagggcaaggacgtcgtggtgctgctcgactcgatcacccggctgggtcgcgcctacaac
aacgcgtcaccggcatcgggccgcatcctgtccggcggcgtcgactccacggcgctgtac
ccgcccaagcgcttcctcggggccgcgcgcaacatcgaggagggcggctcgctgactatc
atcgctaccgcgatggtcgagaccggctccaccggagacacggtcatcttcgaggagttc
aagggcaccggtaacgccgagctcaagctggaccgcaagatcgccgagcgccgggtcttc
cccgcggtcgacgtcaacccgtccggcacccgcaaggacgagctgctgctgtcgcccgac
gagttcgccatcgtgcacaagctgcgccgcgtgctgtcgggtctggattcccaccaggcg
atcgacctgctgatgtcgcagctgcgcaagacgaagaacaattacgagttcctggtgcag
gtgtccaagacgacaccggggtccatggataacgattag
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