Mustela lutreola (European mink): 131808199
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Entry
131808199 CDS
T09578
Symbol
XRN2
Name
(RefSeq) 5'-3' exoribonuclease 2 isoform X1
KO
K12619
5'-3' exoribonuclease 2 [EC:3.1.13.-]
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03008
Ribosome biogenesis in eukaryotes
mlk03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09122 Translation
03008 Ribosome biogenesis in eukaryotes
131808199 (XRN2)
09123 Folding, sorting and degradation
03018 RNA degradation
131808199 (XRN2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlk03021
]
131808199 (XRN2)
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131808199 (XRN2)
03009 Ribosome biogenesis [BR:
mlk03009
]
131808199 (XRN2)
03016 Transfer RNA biogenesis [BR:
mlk03016
]
131808199 (XRN2)
Transcription machinery [BR:
mlk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131808199 (XRN2)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA degradation factors
5'-3' decay
5' exonucleases
131808199 (XRN2)
Ribosome biogenesis [BR:
mlk03009
]
Eukaryotic type
Pre-60S particles
RNases
131808199 (XRN2)
Transfer RNA biogenesis [BR:
mlk03016
]
Eukaryotic type
tRNA degradation factors
Rapid tRNA decay (RTD) pathway factors
131808199 (XRN2)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
XRN_M
XRN_N
Motif
Other DBs
NCBI-GeneID:
131808199
NCBI-ProteinID:
XP_058990176
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All DBs
Position
9:46183535..46274469
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AA seq
950 aa
AA seq
DB search
MGVPAFFRWLSRKYPSIIVNCVEEKPKECNGVKIPVDASKPNPNDVEFDNLYLDMNGIIH
PCTHPEDKPAPKNEDEMMVAIFEYIDRLFNIVRPRRLLYMAIDGVAPRAKMNQQRSRRFR
ASKEGMEAAVEKQRVREEILAKGGFLPPEEIKERFDSNCITPGTEFMDNLAKCLRYYIAD
RLNNDPGWKNLTVILSDASAPGEGEHKIMDYIRRQRAQPNHDPNTHHCLCGADADLIMLG
LATHEPNFTIIREEFKPNKPKPCGLCNQFGHEVKDCEGLPREKKGKHDELADSLPCAEGE
FIFLRLNVLREYLERELTMASLPFTFDVERSIDDWVFMCFFVGNDFLPHLPSLEIREGAI
DRLVNIYKNVVHKTGGYLTESGYVNLQRVQMIMLAVGEVEDSIFKKRKDDEDSFRRRQKE
KRKRMKRDQPAFSPGGILTPHALGSRNSPGSQVASNPRQAAYEMRMQNNSSPSVSPNTSF
TSDGSPSPIGGIKRKAEDSDSEPEPEDNVRLWEAGWKQRYYKNKFDVDAADEKFRRKVVQ
SYVEGLCWVLRYYYQGCASWKWYYPFHYAPFASDFEGIADMPSDFEKGTKPFKPLEQLMG
VFPAASGNFLPPSWRKLMSDPDSSIIDFYPEDFAIDLNGKKYAWQGVALLPFVDERRLRA
ALEEVYPDLTPEETKRNSLGGDILFVGKHHPLHDFILELYQTGSTEPVDVPPELCHGIQG
KFSLDEEAVLPDQIVCSPVPMLRDLTQNTAISINFKDPQFAEDYIFKAVMLPGARKPAPV
LKPSDWEKSSNGRQWKPQLGFNRDRRPVHLDQAAFRTLGHVMPRGSAAGIYGNAAPPPAT
YQGNLYRPLLRGQAQIPKLMSNMRPQDSWRGPPPLFQQQRFDRGVGAEPLLPWNRMLQTQ
NAAFQPNQYQMLAGPGGYPPRRDDRGGRQGYPREGRKYPLPPPSGRYSWN
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atgggagtcccggctttctttcgctggctcagccgcaagtacccgtccatcattgtcaac
tgcgtggaagagaagccaaaagaatgcaatggtgtaaagatccctgttgatgccagtaaa
ccaaatccaaatgatgtggagtttgataatctgtatttggatatgaatggaatcatccat
ccctgtactcatcctgaagacaaaccagcaccaaaaaatgaagacgaaatgatggttgca
atttttgagtacattgacagacttttcaatattgtaagaccaagacgacttctatacatg
gcaatagatggagtggcaccacgtgctaaaatgaaccagcagcgttccagaaggtttaga
gcatcaaaagaaggaatggaagcagcagtggagaagcagcgagtcagggaagaaatattg
gcaaaaggtggctttcttcctccagaagaaataaaagaaagatttgatagcaactgtatt
acaccaggaactgagttcatggacaatcttgctaaatgccttcgctattacatagctgat
cgtttaaataatgaccctgggtggaaaaacttgacagttattttatctgatgctagtgct
cctggtgaaggagaacataaaatcatggattatattagaagacaaagagcccaacctaac
cacgacccaaatactcatcattgcttatgtggagcagatgctgatctcattatgcttggc
cttgctacacatgaacccaactttaccatcattagagaagaattcaaaccaaataaaccc
aaaccatgtggactttgtaatcagtttgggcatgaggtcaaagactgtgaaggtttgcca
agagaaaagaaaggaaagcatgatgaactggcagatagtcttccttgtgcagaaggagaa
tttatcttccttcgtcttaatgttcttcgtgagtatttggaaagagagctcaccatggcc
agcctgccgtttacatttgatgttgagaggagtattgatgactgggtcttcatgtgcttc
tttgtgggaaatgacttccttcctcacttgccatcattagaaattagggaaggtgcaatt
gaccgtttggttaacatatacaaaaatgtggtacacaaaactgggggttaccttacagaa
agtggttatgtcaatctgcaaagagtacagatgatcatgttagcagttggtgaagttgag
gatagcatttttaaaaagagaaaggatgatgaggacagttttagaagacgacagaaagaa
aaaagaaagagaatgaagagagatcaaccagctttctctcctggtggaatattaacccct
catgccttgggttcaagaaattcaccaggttctcaagtagccagtaatccgagacaagca
gcctatgaaatgaggatgcagaataactctagtccttcagtatctcctaatacgagtttc
acttctgatggctccccatctccaataggaggaattaagcgaaaagcagaagacagtgac
agtgaacctgagcctgaggataacgtcaggctatgggaagctggttggaagcagcggtac
tacaagaacaaatttgacgtcgatgcagctgatgagaaattccgtcgtaaagttgtacag
tcttatgttgaggggctctgctgggttcttcgatattattaccagggctgtgcttcctgg
aagtggtattatccattccattatgcaccatttgcttcagactttgaaggtattgcagac
atgccatctgattttgagaagggcactaaaccatttaaaccattggaacaacttatggga
gtttttccagctgcaagtggtaactttctacctccatcatggcggaagctcatgagtgat
cccgattctagtataattgacttctacccagaagattttgctattgatttgaatgggaag
aaatatgcatggcaaggtgttgctctgttgccttttgtggacgagcgaaggctgcgagct
gctctagaagaggtttacccagacctcactccagaagagactaaaagaaacagtcttgga
ggtgacatcttatttgtgggcaaacatcacccactccatgacttcattttagaactctac
cagacaggttccacagagccagtggatgtaccacctgaactatgtcatgggattcaagga
aagttttctttggatgaagaagctgttcttccagatcagatagtatgttctcctgtcccc
atgttaagggatctgacacagaatactgcaatcagtattaattttaaagacccacagttt
gctgaagactacatttttaaagctgtaatgcttccaggagcaagaaaaccagcaccagta
ctgaaacctagtgactgggaaaagtccagcaatggacggcagtggaagccccagcttggt
tttaatcgggaccggcggcctgtccacctggatcaggctgcatttaggactttgggccat
gttatgccaagaggctcagcggctggcatttatggaaatgctgcaccaccacctgcaact
tatcaagggaacttatacaggccgctgttgagaggacaagcccagattccaaaacttatg
tcaaatatgaggccgcaagattcctggcggggtcctcctcctcttttccagcagcaaaga
tttgacagaggcgttggggctgaacctctgctgccatggaaccggatgctccaaacccaa
aatgcagccttccagccaaaccagtaccagatgctagctggacctggcgggtatccaccc
agacgcgatgatcgtggagggagacagggatatcccagagaaggaaggaaataccctttg
ccaccaccctcaggaagatacagttggaattag
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