Mustela lutreola (European mink): 131808588
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Entry
131808588 CDS
T09578
Symbol
MSH2
Name
(RefSeq) DNA mismatch repair protein Msh2
KO
K08735
DNA mismatch repair protein MSH2
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk01524
Platinum drug resistance
mlk03430
Mismatch repair
mlk05200
Pathways in cancer
mlk05210
Colorectal cancer
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
131808588 (MSH2)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
131808588 (MSH2)
09162 Cancer: specific types
05210 Colorectal cancer
131808588 (MSH2)
09176 Drug resistance: antineoplastic
01524 Platinum drug resistance
131808588 (MSH2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlk03400
]
131808588 (MSH2)
DNA repair and recombination proteins [BR:
mlk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
131808588 (MSH2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_IV
MutS_I
MutS_II
AAA_27
Motif
Other DBs
NCBI-GeneID:
131808588
NCBI-ProteinID:
XP_058990725
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Position
9:72194483..72273252
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AA seq
934 aa
AA seq
DB search
MAVQPKETLQLESASEVGFVRFFQAMPEKPTTTVRLFDRGDFYTAHHEDALLAAREVFKT
QGVIKYIGPAGTKTLESVVLSKMNFESFVRDLLLVRQYRVEVYKNRAGNKASKENDWYLA
FKASPGNLSQFEDILFGNNDMSASIGVVGIKMSTVDGQRQVGVGYVDSIQRKLGLCEFPD
NDQFSNLEALLIQIGPKECVLPGGETAGDMGKLRQVIQRGGILITERKRADFLTKDIYQD
LNRLLKGKKGEQVNSAVLPEMENQVAASSLSAVIKFLDLLSDESNFGQFELTMFDFSQYM
KLDIAAVRALNLFQGSLEDTTGSQSLAALLNKCKTPQGQRLVNQWIKQPLLDKNRIEERL
NLVEAFVEDAELRQSLQEDLLRRFPDLNRLAKKFQRQAANLQDCYRLYQGINQLPNVIRA
LEKYEGKHQSLLLAIFVTPLIDLRSDFSKFQEMIETTLDMDQVENHEFLVKPSFDPNLSE
LREIMDDLEKKMQSTLVSAARDLGLDPGKQIKLDSNAQFGYYFRVTCKEEKVLRNNKNFS
TVDIQKNGVKFTNSKLTSLNEEYTKNKTEYEEAQDAIVKEIVNISSGYVEPMQTLNDVLA
QLDAVVSFAHVSNGAPVPYVRPVILEKGQGRITLKASRHACVEVQDEVAFIPNDVHFEKD
KQMFHIITGPNMGGKSTYIRQTGVVVLMAQIGCFVPCESADISIVDCILARVGAGDSQLK
GVSTFMAEMLETASILRSATKDSLIIIDELGRGTSTYDGFGLAWAISEYIATKIGAFCMF
ATHFHELTALANHIPTVNNLHVTALTTEETLTMLYQVKKGVCDQSFGIHVAELANFPRHV
IECARQKALELEEFQNIGGSQGYDDTEPAAKRCYLEREQGEKIIQEFLSKVKQVPFTEMS
EENITMKLKQLKAEVVAKNNSFVNEIISRIKVTT
NT seq
2805 nt
NT seq
+upstream
nt +downstream
nt
atggcggtgcagccgaaggagacgctgcagctggagagcgcgtccgaggtcggcttcgtg
cgcttcttccaggccatgccggagaagccgaccaccacggtgcgcctcttcgaccggggc
gatttctacacggcgcaccacgaggacgcgctgctggccgcccgagaagtgttcaagacc
cagggggtaatcaagtacatagggccggcaggaacaaagaccttggagagtgttgtgctt
agtaaaatgaattttgagtcttttgtaagagatcttcttctagttcgacagtacagagtc
gaagtttataagaatagagctggaaataaggcctcaaaggagaatgattggtatttggca
tttaaggcttccccaggcaatctttcgcagttcgaagacattctctttggtaacaatgat
atgtcagcttccattggtgttgtgggtattaaaatgtctacagttgatggccaaagacag
gttggagttgggtatgttgactccatacagaggaagctaggactttgtgagttccctgat
aatgatcagttctccaacttggaggctctcctgattcagattggaccaaaggaatgtgtt
ctaccaggaggagagactgctggagacatgggaaaactgaggcaggttattcagagagga
ggaattctgatcacagaaagaaaaagagctgactttttgacaaaagatatctatcaggac
ctcaaccggttgttgaaaggcaaaaagggagagcaggtgaatagtgctgtcttgccagaa
atggagaatcaggttgcagcttcatcattgtctgcagtaatcaagtttttagatctccta
tcagatgaatcgaacttcggacagtttgaactgactatgtttgacttcagccagtacatg
aagttggatattgcagcagtcagagcccttaaccttttccagggttctcttgaagatact
actggctctcagtctctggctgcactgctgaataaatgcaaaacccctcagggacaaaga
ctggtcaaccagtggattaagcagcctctgctggataagaacagaatagaagagagactg
aatttagtggaggcttttgtagaagatgcagaattgaggcagagtttacaagaagattta
cttcgtcgattcccagatcttaaccgacttgccaagaaatttcagagacaagcagcaaac
ttacaagattgttaccgactgtatcagggtataaatcaactccctaacgttatccgggct
ctggaaaaatatgaaggaaaacaccagagtttattgttggccatttttgtcactcctctt
attgatcttcgttctgatttctccaaatttcaggaaatgatagaaacaactttagatatg
gatcaggtggaaaaccatgaattccttgtgaaaccttcatttgatcccaatctgagtgaa
ttaagagaaataatggatgacttggaaaagaagatgcagtcaacattagtaagtgcagcg
agagatctaggtttggatcctggcaaacagattaaattggattccaatgcacagtttggt
tattactttcgtgtaacatgtaaggaagaaaaagtccttcgtaataataaaaacttcagt
acggtggacattcagaagaatggtgttaaatttaccaacagtaaactgacttctctcaat
gaagagtataccaaaaataaaactgagtacgaggaagcccaggatgccattgttaaagaa
attgtcaatatttcttcaggatatgtagaaccaatgcagacactcaatgatgtgttagct
cagctagatgcagttgtcagctttgctcacgtgtcaaatggagcacctgttccctatgta
cgtccggtcattttggaaaaaggacaaggaagaattacactgaaagcgtccagacatgct
tgtgttgaagttcaggatgaagttgcatttatacctaatgatgttcactttgaaaaagat
aaacagatgttccacatcattactggccccaatatgggaggtaaatccacttatattcgc
caaactggggtagtagttctcatggcccagattgggtgttttgtgccatgtgagtcagcg
gatatatccattgtggactgcatcctggcccgcgtaggggctggcgacagtcagttgaaa
ggagtctccacattcatggctgaaatgctagaaactgcttctattctcaggtctgcaacc
aaagattctttaataatcatagatgaattgggaagaggaacctctacatatgatggattt
ggattagcatgggctatatcagagtacattgcgacaaagattggtgctttttgcatgttt
gcaacacattttcatgaacttactgccttggccaatcacataccaactgttaataatcta
catgtcacagcactaactactgaagaaaccttaactatgctttatcaggtgaagaaaggt
gtctgtgatcaaagttttgggattcacgttgcagagcttgcaaatttccctaggcatgta
atagagtgtgctagacagaaagctctggaactagaggagtttcagaatattggaggatca
caaggatatgatgatacggaaccagcagcaaagaggtgctatctggaaagagagcaaggt
gaaaaaattattcaggagtttttatccaaggtgaagcaagtgccttttactgaaatgtcg
gaagaaaacatcacaatgaagttaaaacagctgaaagctgaggtagtagcaaagaataat
agttttgtaaatgaaatcatttcacgaatcaaagttactacatga
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