Mustela lutreola (European mink): 131809355
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Entry
131809355 CDS
T09578
Symbol
PRPF38B
Name
(RefSeq) pre-mRNA-splicing factor 38B isoform X1
KO
K12850
pre-mRNA-splicing factor 38B
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131809355 (PRPF38B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlk03041
]
131809355 (PRPF38B)
Spliceosome [BR:
mlk03041
]
Complex B
U4/U6.U5 tri-snRNP components
U4/U6.U5 tri-snRNP related factors
131809355 (PRPF38B)
Complex C
U4/U6.U5 tri-SnRNP related factors
131809355 (PRPF38B)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PRP38
PRP38_assoc
Motif
Other DBs
NCBI-GeneID:
131809355
NCBI-ProteinID:
XP_058992314
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All DBs
Position
10:92896967..92906346
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AA seq
549 aa
AA seq
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MANNSPALTGNSQPQHQAAAAAAQQQQQCGGGGGGATKPAVSGKQGNVLPLWGNEKTMNL
NPMILTNILSSPYFKVQLYELKTYHEVVDEIYFKVTHVEPWEKGSRKTAGQTGMCGGVRG
VGTGGIVSTAFCLLYKLFTLKLTRKQVMGLITHTDSPYIRALGFMYIRYTQPPTDLWDWF
ESFLDDEEDLDVKAGGGCVMTIGEMLRSFLTKLEWFSTLFPRIPVPVQKNIDQQIKTRPR
KIKKDGKEGAEEIDRHVERRRSRSPRRSLSPRRSPRRSRSRSHHREGHGSSSFDRELERE
KERQRLEREAKEREKERRRSRSIDRGLERRRSSRSRERHRSRSRSRDRKGDRRDRDRERE
KENERGRRRDRDYDKERGNDREKERERSRERSKERRSRGEVEEKKHKEDKDDRRHRDDKK
DTKKEKKHSRSRSRERKHRSRSRSRNAGKRSRSRSKEKSSKHKNESKEKSNKRSRSGSQG
RTDSVEKSRKREHSPSKEKSRKRSRSKERSHKRDHSDSKDQSDKHDRRRSQSIEPESQEK
QHKNKDETV
NT seq
1650 nt
NT seq
+upstream
nt +downstream
nt
atggctaacaacagccccgcgctgacaggcaactcgcagccgcagcaccaggcggccgcg
gccgcggcccagcagcagcagcagtgcggcggtggcggcggcggcgccaccaagccggcg
gtctcgggcaaacagggaaatgtgctaccgctgtggggcaacgagaagactatgaacctc
aaccccatgatcttgaccaatatcctgtcgtcgccttacttcaaagtgcagctctacgag
ctcaagacctaccacgaggtggtggacgagatctactttaaggtcacgcatgttgaacca
tgggagaaaggaagcaggaaaacagcaggccaaacggggatgtgcggaggggttcgaggt
gttggaacaggaggaattgtttctacagctttctgcttgttatacaaattatttactctg
aagctaactcgtaagcaagtgatgggtctcataacacacacagactctccatatattaga
gcccttggatttatgtatataaggtacacacagccccctacagatctctgggactggttt
gaatccttccttgatgatgaagaggacctagatgtgaaggctggtggaggctgtgtaatg
accattggagaaatgctgcggtcttttctcacaaaactggagtggttttctaccctgttt
ccaagaattccagttccagttcagaagaatattgatcaacagatcaaaacccggcctaga
aaaatcaagaaagatgggaaggaaggtgctgaggaaatagacagacatgttgaacgcagg
cgttcaaggtctccaaggagatcactgagtccacggaggtccccaagaagatcaagaagt
agaagccatcaccgggagggccatgggtcttctagttttgatcgagaattagaaagagag
aaagaacgccagcgactagagcgcgaagccaaagaaagggagaaagaaaggcgaagatcc
cgaagtattgatcgggggttggaacgcaggcggagtagcaggagtagggaaaggcataga
agtcgtagtcgcagtcgggataggaaaggggatcgaagggacagggatagggaaagagag
aaagaaaatgagagaggtagaagacgggatcgtgactatgataaggaaagaggtaatgac
cgagaaaaggagcgagagcgatcaagagaacgatccaaggaacggagaagtaggggtgag
gtagaagaaaagaaacacaaagaagataaagatgataggcggcatagagatgacaaaaaa
gataccaagaaggagaaaaaacacagtaggagtagaagcagagaaaggaagcacagaagt
aggagtagaagtagaaatgcagggaaacgaagcagaagtaggagcaaagagaaatcaagt
aaacataaaaatgaaagtaaagaaaaatcaaataaacgaagtagaagtggcagtcaagga
agaactgacagtgtggaaaaatcaagaaaacgggaacatagccccagcaaagaaaaatct
agaaagcgtagcagaagcaaagaacgttcccacaaacgagatcacagtgatagtaaggac
cagtctgacaaacatgatcgtcgaaggagccaaagtatagaaccagagagccaagagaaa
caacataaaaacaaagatgagactgtgtga
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