Mustela lutreola (European mink): 131809679
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Entry
131809679 CDS
T09578
Symbol
DDX20
Name
(RefSeq) probable ATP-dependent RNA helicase DDX20 isoform X1
KO
K13131
ATP-dependent RNA helicase DDX20 [EC:
5.6.2.7
]
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
mlk03041
]
131809679 (DDX20)
Enzymes [BR:
mlk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
131809679 (DDX20)
Spliceosome [BR:
mlk03041
]
Other splicing related proteins
Proteins involved in snRNP biogenesis
SMN complex factors
131809679 (DDX20)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
AAA_30
Motif
Other DBs
NCBI-GeneID:
131809679
NCBI-ProteinID:
XP_058992950
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All DBs
Position
10:95573028..95584679
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AA seq
852 aa
AA seq
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MSEAIPGQARTGQRAPSFLSIARSGGAATMAAAFEAPAALATEEAAMPAERVASQVVASE
PFPGPVRGLRTAHDVSGPRTRTGDVLLAEPADFESLLLSRPVLEGLRAAGFERPSPVQLK
AIPLGRCGLDLIVQAKSGTGKTCVFSTIALDSLVLENLSTQILILAPTREIAVQIHSVIT
AIGIKMEGLECHVFIGGTPLSQDKTRLKKCHIAVGSPGRIKQLIELDYLNPGSVRLFILD
EADKLLEEGSFQEQINWIYSSLPASKQMLAVSATYPEFLANALTKYMRDPTFVRLNSSDP
SLIGLKQYYKIVNSYPLAHKIFEEKAQHLQELFSRIPFNQALVFSNLHSRAQHLADILSS
KGFPAECISGNMNQNQRLDAMAKLKQFHCRVLISTDLTSRGIDAEKVNLVVNLDVPLDWE
TYMHRIGRAGRFGTLGLTVTYCCRGEEENVMMKIAQKCNINLLPLPDPIPSGLMEECLDW
DVEVKAAMHTYGLASVPTQPLKKQIQKVERTFQTQKTHGNHVASSRNTSVSSLVVKSKNN
TKQKLPVKSHSECRITEKAMSPKEVGSGIQLEEPMKSSVEISVENTTDKHQVREALPASL
PKIPCLSSFKIHLPCSLTFTELVEDYEHYIKEGLEKPVEIIRHYTGPGDQTVNPQNGFVR
NRIPEERVAILASSSQSGDSESDSDSYSSRTSSQSKGNKSYLEGSSDTQLKDSESTPVDG
HISLEQPLNGNDTPNPAEYQESPGIQTKTRHKEGANQRAKQSRRNPPRRSSYRVPAEPQD
DGWYDCHRETHPSFSDAYQDYEEYWRAYYRAWQEYYAAASQSYYWNAQRHPSWMAAYHMN
TVYLQEMMRGNQ
NT seq
2559 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaagcgataccgggacaggctcggaccggacaacgggcgccctccttcttaagt
atcgcgagatccggcggcgcggcgacgatggcggcggcgtttgaagccccagcggcctta
gcgacggaggaggctgctatgccggcggagcgtgtggcctcacaggtcgtggcctcggag
ccattccctgggccggtgcggggcctgcggacggctcacgacgtcagcggcccacggacc
cgcaccggggacgtgctgctggcggagccggccgacttcgagtcactgctgctgtcgcgg
ccggtgctggaggggctgcgcgcggctggcttcgagaggccctcgccggtgcaactcaag
gccatccctctggggcgctgcgggctcgatttaattgttcaagccaagtctggcactggg
aaaacctgtgtgttctctaccattgctttggactcgctggttcttgaaaacctgagtacc
cagattttgatcttggctcctacaagagaaattgctgtacagatacattctgttattaca
gctattggaataaaaatggaaggcttagagtgtcatgtctttattggagggactccatta
tcacaagacaaaaccagacttaaaaagtgtcatattgctgttggctctcctggcagaatt
aaacaactgatagaacttgactacttgaatccaggcagtgtacgtctatttattcttgat
gaagcagataagcttttagaagaaggcagcttccaggagcaaataaactggatttattct
tccttgcctgccagtaaacagatgttggcggtatcagctacctaccctgaatttttggct
aatgctttgacaaagtacatgagagatcccacttttgtaagactaaattccagtgatcca
agtctcataggtttgaagcaatattacaaaattgtcaattcatacccgttggcccataag
atttttgaggaaaaggctcagcatttacaggaactgttcagcagaattccatttaatcaa
gccttagtcttttctaatttgcacagcagagcacaacatttggcagatatcctttcttct
aaaggctttcctgctgagtgcatttcaggcaacatgaatcagaatcagcgtcttgatgct
atggccaaactgaagcagtttcattgcagagtcctcatttccacagatttgacttcccgt
gggattgatgctgagaaggtgaacctggttgtaaatctggatgtaccattggattgggag
acatacatgcatcggattggcagagctggccgttttggtactttggggttgacagtgacc
tactgttgtcggggagaagaagaaaacgtgatgatgaaaatcgcccagaaatgtaacatc
aaccttctgcctttaccagatcccattccttctggtctaatggaagaatgtttggattgg
gacgtggaggttaaagcagctatgcatacgtatggcttagcaagtgtacctacccagccc
ttaaaaaagcagatccaaaaagtggagagaacctttcaaactcagaaaactcatggtaac
cacgtggcttcatctagaaatacttctgtatcttcactagtagtcaaatcaaaaaataat
actaaacagaagcttcctgtgaaaagccactcagagtgtagaatcacagaaaaagcaatg
tcaccaaaagaagtgggcagtggcatacaactggaagagcctatgaagtcttctgttgag
atctctgttgaaaacactaccgataagcaccaggtcagagaagctttacctgcgtcactg
cccaaaattccttgtctgtcttcctttaaaatccatctgccatgctctttgacttttaca
gaattggtagaggattatgaacactatattaaagaggggttagagaaacctgtggaaatc
atcaggcattacacggggcctggggatcagactgtgaatcctcagaatggttttgtaaga
aatagaattcccgaggagagagtggcgatactggcaagtagtagtcagtctggagactca
gagagtgacagcgattcttacagctcgaggacttcttcccagagcaaaggaaataagtcc
tacttggaaggctcttcagatactcagctgaaagactcagaatccactcctgtggatggt
catatctctttggaacaacctctgaatggaaacgacacccctaatccagcagagtatcaa
gaatcacctggaatccagacaaagaccaggcataaagagggggctaaccagagagccaag
caaagccggagaaaccctcccaggcgatcttcctatcgtgtaccggcagaacctcaggat
gatggttggtatgactgccacagggaaacccatccgagtttttcggatgcctatcaggat
tacgaggagtactggagggcctactacagggcatggcaggaatactatgctgctgcttct
cagtcctattactggaatgctcagaggcatccaagttggatggcagcttatcacatgaat
accgtttatctccaagaaatgatgcgaggcaaccagtga
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