| Entry |
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| Symbol |
SHOC1
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| Name |
(RefSeq) protein shortage in chiasmata 1 ortholog
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| KO |
| K28108 | shortage in chiasmata 1 |
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| Organism |
mlk Mustela lutreola (European mink)
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| Brite |
KEGG Orthology (KO) [BR:mlk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:mlk03036]
131812104 (SHOC1)
Chromosome and associated proteins [BR:mlk03036]
Eukaryotic type
Meiosis-specific proteins
Others
131812104 (SHOC1)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
12:21360586..21434210
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| AA seq |
1507 aa
MFSTFKYCAIDYLYENIVRKKFCRDALLLQVPSCLYQDGNYYAGVIDNKFRRPWMRVSAV
SVWGMTDDISVLDQWKASLFVEDFLEKKTITGVVTQIDCMFEEVVPSSNPNSQTDIEEAS
LYTRKDYTEVFTLVSGLGKCPALQTQNEDLSIDEEIIFLNNLMTYKSQLPTLHTLLSRLK
LFLVKDPILDFKGQIFTEANFFRECFSFQEDLKGLVKEDFYMDKENFCQEKLEDTPSSLP
ECEFLIPTSLKQDVDILSLSKLKESLNLVPEIINYADENEKLFKIDLTTKHGIDIEDIKC
SSTEILAIQKHCEPEYSEPVELEMPLTHLHLTNQHSSMTSLCTGLQTFPFSPICKISLLT
AEESANKNHMMWQLESCRSSLKPFLLTVPRTEEPNSQYSVMDLKKIFSIEEESLVVNLVS
TEWWEKGQLNLKEAEVLEHPNMYLCHDNLSSDDTKMEIFLPTKEPQLESWLEQKSYSSPT
VLINETSTNDHLLPPQKILSLAEVSDLCFSDDNLSVKQPTKEEKPKNDLELVDRISQNKE
NEDYLELDCTVPSVEPSSSPKIDKASFKHGKKWENDLDLLSDFITLRNKYKTCMSKTEVT
GSKENDGFQDKEHCLTLQEESPPVCTNKALEKINQERIVDNVIEIQASDSQCQAFCLLEA
AATPILKKLVCLCTLPAANWTFATVIFDQTRFLLKEQEKVISDAIQQGTNDEKEVTFKHA
ALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKNILGSYLDDICRQLEIVQFIREKKPET
NHKIQELQCQILSWMQSGQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVLHSNNKRK
DFLESEGVLNGKSSCVVVHNQYIGSDFPWSNFSFVVEYNFVENSCWTKHCKKLNIPHKVF
KVILPDTVLRRSTLLDSFGGFLLEIQVPYVFFASEGLLNNQEILQLLESKYNITLVERCC
SESLKLFGGTECYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILY
TKKTLNAQYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEEAALIIRQIADHN
LMTSKRDPREWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQL
QELLPEVPEKVLKHFCSITSLFKISSSSITNSPQSPSPQENGNQTSTFTSQSLASGSSNS
VFQGHNENYHFSDIGEAVHGDTNSSSNCNSSLMELREMPCVLPPVTSYNQASYWKDSNCN
PNIVHHPFLINTESKNVADDSFQNQNDSESDVFCLDLTQINYENIVSPIDTQKRVAPNFI
NYQKKGTHDAKRHINKEVSAPSFSLEGSQSPLHWNFKKDVWEQQNHSFNLKYGAKQTACD
KWYSQENNLFTNQQKCLSDELEDFICERSNAGTKRTSWKELPSAPSLDLFCASDPNVNQK
EFSSLYFHQRAGKCLGQKRHSDSSSNSGDKKSLPDFMCSQLPQFKKRRLVYEKVPGRADG
QTRLRFF |
|---|
| NT seq |
4524 nt +upstreamnt +downstreamnt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcaagtcccttcatgtttatatcaagatggaaat
tattatgcaggagttattgataataagtttaggaggccatggatgagagtttcagctgtt
tcggtgtggggaatgacagatgatatttcagtcttggatcaatggaaagcaagtcttttt
gtggaggattttctagagaaaaaaacaattacaggagtggtgactcagattgactgtatg
tttgaggaagttgttccaagttcaaacccaaactcccaaactgatatagaggaagccagt
ttatatacccgtaaggattacaccgaagtctttacacttgtcagcggtttaggaaaatgt
ccagcacttcaaacacagaatgaagatttgtctattgatgaagaaataatttttttaaat
aacttgatgacctataaaagtcagctaccaactttgcatactttgttgagtaggctaaaa
ctatttttagtaaaggaccccattttagatttcaaaggacagatcttcacagaagctaat
ttcttcagggaatgtttctcttttcaagaagatttgaagggtctagtgaaagaagatttt
tacatggataaagagaacttttgtcaggaaaagctagaagatacaccatcaagtttgcct
gagtgtgaattcttaatacctacaagcctcaaacaagatgttgatattctgtcactctcc
aaactaaaggaatccttaaacttagtgccagaaataataaattatgcagatgaaaatgaa
aagcttttcaaaatagatcttactactaagcatggaattgacattgaggatataaaatgc
agctccacagagattttggccattcaaaaacattgtgaaccagagtacagtgaaccagtt
gagttagaaatgccattaactcatctacatctaacaaaccaacattcttccatgacttca
ttatgtacaggacttcagacatttccattttctcctatttgtaaaattagtttgcttact
gctgaagaatcagctaacaaaaaccacatgatgtggcagttagaaagctgcagaagctca
ctgaaaccatttctgcttacagtgccaagaactgaagagcccaacagtcaatattcagtt
atggatttgaaaaagatattttctattgaggaagaaagcctggtagttaatcttgtgagc
acagagtggtgggaaaagggacaactgaatctgaaagaggcagaagttttggaacatcca
aatatgtatttgtgtcatgataacctatcatctgatgatactaaaatggagatatttttg
ccaacaaaagagcctcagttagaatcatggctagagcaaaaaagttattcttcacctact
gtacttattaatgagacatctacaaatgatcatttattacctccacaaaagattttatct
ctggcagaagtatcagatctgtgtttttctgatgacaatttatctgttaaacaaccaaca
aaagaagaaaaaccaaagaatgatctagaactagttgatagaataagccaaaataaagaa
aatgaagattacttagaacttgactgcacagtaccatctgttgaaccatcttcctctcca
aaaattgataaagcatcttttaagcatggtaaaaaatgggagaacgatttggaccttttg
agtgactttattacactgcgaaataaatataagacttgtatgtcaaagactgaagtcaca
ggcagtaaagaaaatgatggatttcaagataaagaacattgtttgactcttcaggaagaa
agtcctcctgtttgtactaataaagctctagagaaaataaatcaggaaaggatagtggat
aatgtcattgaaattcaagcatcagatagccagtgccaagcattctgtctcctagaagca
gcagctactcctattttaaaaaaacttgtatgcctctgtactctccctgccgctaattgg
acatttgccactgtcatttttgaccaaacaagattcctcctaaaggaacaagaaaaagta
ataagtgatgctattcagcaaggtacaaatgatgaaaaagaagtgacgttcaagcatgct
gctctcttacatcttctggtaacaattagagatgtccttttaacatgtagcttggacaca
gcattgggatatttgtcaaatgcaaaagatatctacaaaaatattttaggctcctattta
gatgacatttgcagacagctggagattgtacagtttattagggaaaaaaagcctgaaacc
aaccacaagatacaagaactacaatgtcagatactaagttggatgcaaagtgggcaacag
attaaggtgctgattataataagaatggactcagatggtgaaaaacatttactcattaaa
atccttaacaaaatggaaggtttaacattgactgtcttacattcaaacaacaaaaggaaa
gatttcctggaatctgaaggtgttttaaatggtaaaagttcctgtgtagttgtgcataat
caatatattggatcagatttcccctggagtaacttctcatttgtggtggaatataatttt
gtagaaaactcctgttggactaaacactgcaagaaattgaatattcctcacaaggtcttc
aaagtgattcttccagacacagttttacggagaagcaccttgctggatagttttggtgga
tttcttctggaaatacaggttccatatgtgttttttgcatctgaaggacttcttaataat
caagaaatacttcagttgctagaatccaagtataatatcacactagtggagagatgctgc
agtgagtcattgaaactctttggaggtacagagtgttatgtagtggtgacagttgatgaa
cacactgccataattttgcaggacctagaagaattgaactgtgagaaggcatcagacaat
atcattatgagactgatggcattatcattccagtacagctattgttggataatcttgtat
accaaaaaaacattaaacgcacagtaccatcttacagaaaaaacacttcatcatctagca
ctgatttatgcagctttggtatcatttgggctaaaatcagaagaactggatgtaaagctt
ataattgccccaggagtggaagaggctgcactgataattcggcaaattgctgatcacaat
ttaatgacctcaaagagagatcctcgtgaatggttggataaatcctggcttgaagtttca
ccatctaaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcag
ctcatgttaaataaaggaccttcactgcactggatattattagcaactctgtgtcaactt
caggagcttttacctgaagttccagaaaaagtattaaagcatttttgtagcatcacttcc
ttattcaagattagttcttcttccataacaaactcacctcaaagtccatcacctcaggaa
aatggaaatcagactagtaccttcacctcccagagtttagcttctggctcttcaaactct
gtctttcaaggacataatgaaaattaccacttttcagatataggagaagcagtgcatgga
gacacaaacagctcttcaaactgtaactcttcccttatggaactaagagaaatgccatgc
gttttaccacctgtgacttcttacaatcaggccagctactggaaagactccaattgtaac
cctaacatagtgcatcatcctttcctgattaatacagaatcaaagaatgtagctgatgac
tcctttcaaaaccaaaatgattcagagtcagatgtcttttgtttggatctaacacaaata
aactatgaaaacatagtatcaccaattgacactcagaagagagttgcccctaattttata
aattaccagaaaaagggaacacatgatgcaaaaagacatataaataaagaagtgtctgcc
cctagcttttcactagaaggctcccaatctcctcttcactggaactttaagaaagatgta
tgggaacaacagaatcactcattcaacttaaaatatggtgcaaagcagactgcatgtgac
aaatggtactctcaggaaaataatttattcactaatcagcaaaaatgtttatctgatgag
ttagaagacttcatatgtgaaaggtcaaatgctgggactaaaaggacatcctggaaagaa
ttaccatctgcccccagtttggatttattttgtgcttctgatcctaatgtaaatcaaaaa
gaattcagcagtctttatttccaccaaagagctgggaaatgtttaggacagaagaggcac
tcggactcctcatctaactcaggagacaagaaatcattaccagatttcatgtgctcacaa
ctaccacaattcaaaaaacggcgtctggtgtatgaaaaagtccctggtagagctgatgga
caaactcgtctgaggtttttttga |
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