Mustela lutreola (European mink): 131812104
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Entry
131812104 CDS
T09578
Symbol
SHOC1
Name
(RefSeq) protein shortage in chiasmata 1 ortholog
KO
K28108
shortage in chiasmata 1
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
mlk03036
]
131812104 (SHOC1)
Chromosome and associated proteins [BR:
mlk03036
]
Eukaryotic type
Meiosis-specific proteins
Others
131812104 (SHOC1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF5587
Motif
Other DBs
NCBI-GeneID:
131812104
NCBI-ProteinID:
XP_058997203
LinkDB
All DBs
Position
12:21360586..21434210
Genome browser
AA seq
1507 aa
AA seq
DB search
MFSTFKYCAIDYLYENIVRKKFCRDALLLQVPSCLYQDGNYYAGVIDNKFRRPWMRVSAV
SVWGMTDDISVLDQWKASLFVEDFLEKKTITGVVTQIDCMFEEVVPSSNPNSQTDIEEAS
LYTRKDYTEVFTLVSGLGKCPALQTQNEDLSIDEEIIFLNNLMTYKSQLPTLHTLLSRLK
LFLVKDPILDFKGQIFTEANFFRECFSFQEDLKGLVKEDFYMDKENFCQEKLEDTPSSLP
ECEFLIPTSLKQDVDILSLSKLKESLNLVPEIINYADENEKLFKIDLTTKHGIDIEDIKC
SSTEILAIQKHCEPEYSEPVELEMPLTHLHLTNQHSSMTSLCTGLQTFPFSPICKISLLT
AEESANKNHMMWQLESCRSSLKPFLLTVPRTEEPNSQYSVMDLKKIFSIEEESLVVNLVS
TEWWEKGQLNLKEAEVLEHPNMYLCHDNLSSDDTKMEIFLPTKEPQLESWLEQKSYSSPT
VLINETSTNDHLLPPQKILSLAEVSDLCFSDDNLSVKQPTKEEKPKNDLELVDRISQNKE
NEDYLELDCTVPSVEPSSSPKIDKASFKHGKKWENDLDLLSDFITLRNKYKTCMSKTEVT
GSKENDGFQDKEHCLTLQEESPPVCTNKALEKINQERIVDNVIEIQASDSQCQAFCLLEA
AATPILKKLVCLCTLPAANWTFATVIFDQTRFLLKEQEKVISDAIQQGTNDEKEVTFKHA
ALLHLLVTIRDVLLTCSLDTALGYLSNAKDIYKNILGSYLDDICRQLEIVQFIREKKPET
NHKIQELQCQILSWMQSGQQIKVLIIIRMDSDGEKHLLIKILNKMEGLTLTVLHSNNKRK
DFLESEGVLNGKSSCVVVHNQYIGSDFPWSNFSFVVEYNFVENSCWTKHCKKLNIPHKVF
KVILPDTVLRRSTLLDSFGGFLLEIQVPYVFFASEGLLNNQEILQLLESKYNITLVERCC
SESLKLFGGTECYVVVTVDEHTAIILQDLEELNCEKASDNIIMRLMALSFQYSYCWIILY
TKKTLNAQYHLTEKTLHHLALIYAALVSFGLKSEELDVKLIIAPGVEEAALIIRQIADHN
LMTSKRDPREWLDKSWLEVSPSKEEMYLLDFPCINPLVAQLMLNKGPSLHWILLATLCQL
QELLPEVPEKVLKHFCSITSLFKISSSSITNSPQSPSPQENGNQTSTFTSQSLASGSSNS
VFQGHNENYHFSDIGEAVHGDTNSSSNCNSSLMELREMPCVLPPVTSYNQASYWKDSNCN
PNIVHHPFLINTESKNVADDSFQNQNDSESDVFCLDLTQINYENIVSPIDTQKRVAPNFI
NYQKKGTHDAKRHINKEVSAPSFSLEGSQSPLHWNFKKDVWEQQNHSFNLKYGAKQTACD
KWYSQENNLFTNQQKCLSDELEDFICERSNAGTKRTSWKELPSAPSLDLFCASDPNVNQK
EFSSLYFHQRAGKCLGQKRHSDSSSNSGDKKSLPDFMCSQLPQFKKRRLVYEKVPGRADG
QTRLRFF
NT seq
4524 nt
NT seq
+upstream
nt +downstream
nt
atgttttcaacattcaaatattgtgcaatagactatttatatgagaatatagttagaaag
aagttttgcagagatgctttattgcttcaagtcccttcatgtttatatcaagatggaaat
tattatgcaggagttattgataataagtttaggaggccatggatgagagtttcagctgtt
tcggtgtggggaatgacagatgatatttcagtcttggatcaatggaaagcaagtcttttt
gtggaggattttctagagaaaaaaacaattacaggagtggtgactcagattgactgtatg
tttgaggaagttgttccaagttcaaacccaaactcccaaactgatatagaggaagccagt
ttatatacccgtaaggattacaccgaagtctttacacttgtcagcggtttaggaaaatgt
ccagcacttcaaacacagaatgaagatttgtctattgatgaagaaataatttttttaaat
aacttgatgacctataaaagtcagctaccaactttgcatactttgttgagtaggctaaaa
ctatttttagtaaaggaccccattttagatttcaaaggacagatcttcacagaagctaat
ttcttcagggaatgtttctcttttcaagaagatttgaagggtctagtgaaagaagatttt
tacatggataaagagaacttttgtcaggaaaagctagaagatacaccatcaagtttgcct
gagtgtgaattcttaatacctacaagcctcaaacaagatgttgatattctgtcactctcc
aaactaaaggaatccttaaacttagtgccagaaataataaattatgcagatgaaaatgaa
aagcttttcaaaatagatcttactactaagcatggaattgacattgaggatataaaatgc
agctccacagagattttggccattcaaaaacattgtgaaccagagtacagtgaaccagtt
gagttagaaatgccattaactcatctacatctaacaaaccaacattcttccatgacttca
ttatgtacaggacttcagacatttccattttctcctatttgtaaaattagtttgcttact
gctgaagaatcagctaacaaaaaccacatgatgtggcagttagaaagctgcagaagctca
ctgaaaccatttctgcttacagtgccaagaactgaagagcccaacagtcaatattcagtt
atggatttgaaaaagatattttctattgaggaagaaagcctggtagttaatcttgtgagc
acagagtggtgggaaaagggacaactgaatctgaaagaggcagaagttttggaacatcca
aatatgtatttgtgtcatgataacctatcatctgatgatactaaaatggagatatttttg
ccaacaaaagagcctcagttagaatcatggctagagcaaaaaagttattcttcacctact
gtacttattaatgagacatctacaaatgatcatttattacctccacaaaagattttatct
ctggcagaagtatcagatctgtgtttttctgatgacaatttatctgttaaacaaccaaca
aaagaagaaaaaccaaagaatgatctagaactagttgatagaataagccaaaataaagaa
aatgaagattacttagaacttgactgcacagtaccatctgttgaaccatcttcctctcca
aaaattgataaagcatcttttaagcatggtaaaaaatgggagaacgatttggaccttttg
agtgactttattacactgcgaaataaatataagacttgtatgtcaaagactgaagtcaca
ggcagtaaagaaaatgatggatttcaagataaagaacattgtttgactcttcaggaagaa
agtcctcctgtttgtactaataaagctctagagaaaataaatcaggaaaggatagtggat
aatgtcattgaaattcaagcatcagatagccagtgccaagcattctgtctcctagaagca
gcagctactcctattttaaaaaaacttgtatgcctctgtactctccctgccgctaattgg
acatttgccactgtcatttttgaccaaacaagattcctcctaaaggaacaagaaaaagta
ataagtgatgctattcagcaaggtacaaatgatgaaaaagaagtgacgttcaagcatgct
gctctcttacatcttctggtaacaattagagatgtccttttaacatgtagcttggacaca
gcattgggatatttgtcaaatgcaaaagatatctacaaaaatattttaggctcctattta
gatgacatttgcagacagctggagattgtacagtttattagggaaaaaaagcctgaaacc
aaccacaagatacaagaactacaatgtcagatactaagttggatgcaaagtgggcaacag
attaaggtgctgattataataagaatggactcagatggtgaaaaacatttactcattaaa
atccttaacaaaatggaaggtttaacattgactgtcttacattcaaacaacaaaaggaaa
gatttcctggaatctgaaggtgttttaaatggtaaaagttcctgtgtagttgtgcataat
caatatattggatcagatttcccctggagtaacttctcatttgtggtggaatataatttt
gtagaaaactcctgttggactaaacactgcaagaaattgaatattcctcacaaggtcttc
aaagtgattcttccagacacagttttacggagaagcaccttgctggatagttttggtgga
tttcttctggaaatacaggttccatatgtgttttttgcatctgaaggacttcttaataat
caagaaatacttcagttgctagaatccaagtataatatcacactagtggagagatgctgc
agtgagtcattgaaactctttggaggtacagagtgttatgtagtggtgacagttgatgaa
cacactgccataattttgcaggacctagaagaattgaactgtgagaaggcatcagacaat
atcattatgagactgatggcattatcattccagtacagctattgttggataatcttgtat
accaaaaaaacattaaacgcacagtaccatcttacagaaaaaacacttcatcatctagca
ctgatttatgcagctttggtatcatttgggctaaaatcagaagaactggatgtaaagctt
ataattgccccaggagtggaagaggctgcactgataattcggcaaattgctgatcacaat
ttaatgacctcaaagagagatcctcgtgaatggttggataaatcctggcttgaagtttca
ccatctaaggaagaaatgtacttacttgattttccatgtattaacccattggtggctcag
ctcatgttaaataaaggaccttcactgcactggatattattagcaactctgtgtcaactt
caggagcttttacctgaagttccagaaaaagtattaaagcatttttgtagcatcacttcc
ttattcaagattagttcttcttccataacaaactcacctcaaagtccatcacctcaggaa
aatggaaatcagactagtaccttcacctcccagagtttagcttctggctcttcaaactct
gtctttcaaggacataatgaaaattaccacttttcagatataggagaagcagtgcatgga
gacacaaacagctcttcaaactgtaactcttcccttatggaactaagagaaatgccatgc
gttttaccacctgtgacttcttacaatcaggccagctactggaaagactccaattgtaac
cctaacatagtgcatcatcctttcctgattaatacagaatcaaagaatgtagctgatgac
tcctttcaaaaccaaaatgattcagagtcagatgtcttttgtttggatctaacacaaata
aactatgaaaacatagtatcaccaattgacactcagaagagagttgcccctaattttata
aattaccagaaaaagggaacacatgatgcaaaaagacatataaataaagaagtgtctgcc
cctagcttttcactagaaggctcccaatctcctcttcactggaactttaagaaagatgta
tgggaacaacagaatcactcattcaacttaaaatatggtgcaaagcagactgcatgtgac
aaatggtactctcaggaaaataatttattcactaatcagcaaaaatgtttatctgatgag
ttagaagacttcatatgtgaaaggtcaaatgctgggactaaaaggacatcctggaaagaa
ttaccatctgcccccagtttggatttattttgtgcttctgatcctaatgtaaatcaaaaa
gaattcagcagtctttatttccaccaaagagctgggaaatgtttaggacagaagaggcac
tcggactcctcatctaactcaggagacaagaaatcattaccagatttcatgtgctcacaa
ctaccacaattcaaaaaacggcgtctggtgtatgaaaaagtccctggtagagctgatgga
caaactcgtctgaggtttttttga
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integrated database retrieval system
