Mustela lutreola (European mink): 131812471
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Entry
131812471 CDS
T09578
Symbol
VPS13A
Name
(RefSeq) intermembrane lipid transfer protein VPS13A isoform X1
KO
K19525
vacuolar protein sorting-associated protein 13A/C
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
mlk04131
]
131812471 (VPS13A)
Membrane trafficking [BR:
mlk04131
]
Endosome - Golgi transport
Rab GTPases and associated proteins
Rab associated proteins
131812471 (VPS13A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
VPS13_N
VPS13_M
VPS13_VAB
VPS13_C
Mer2
RRM_fung
Motif
Other DBs
NCBI-GeneID:
131812471
NCBI-ProteinID:
XP_058998040
LinkDB
All DBs
Position
12:complement(82679329..82903905)
Genome browser
AA seq
3207 aa
AA seq
DB search
MVFESVVVDVLNRFLGDYVVNLDTSQLTLGIWGGAVALKNLEIKENALSQLDVPFKVKVG
HIGNLNLTIPWKNLYTQPVEAFLGDIYLLIVPSSKIKYDPLKEEKQLLEAKQHELKRIEE
AKQKVADQDKLRVEKQDTFTEKLITQIIKNLQVKISNIHIRYEDDITNRDNPLSFGISLQ
NLSMQTTDQNWVPCLHDETEKLFRKLIRLDNLFAYWNVKSQLFYLNDYDESLDSLRKGIV
YRNIVPEGYDFVFRPISANAKLQMNRRSDFDFSAPKINLEVELHDIAIEFNKPQYFSVME
LLESIDMMTQNLPYRKFKPDVPLHYHARDWWAYAIHGILEVNVCPRLRMWSWKHIREHRQ
KMKQYKELYKKKITTKKPAGEILISLEELEKTLDVFNITISRQQAEVEVKKAGYRIFREG
AKDSEENKGWFSWLWSWSEPKSKEQPDVKPGILEEMLTSEEKALLYEAIGYSETAVDPTL
PKTFEAMKFFVHLKSMSVVLREKRGTPELLDIVVEEFSTLIVQRPGAQAIKFETKIDSFH
VTGLPDNSTKPRLLSSLDDATSLFQIIFEINPLDETVAQRCIIEAEPLEMIYDARTVNSI
VDFFRPPKEVNLAQLTSATLTKLEEFRDKTATGLLYIIETQKVLDLKINLKASYVIIPQD
GIFSPTSNLLLLDLGHLKVTSKSRSELPDMKPGGASLEEIMQRAYDSFDVQLTSIQLLYS
TVGDNWREARKLNVSTQHVLVPMHFNVELSKAMVFMDIRMPKFKIFGKLPLISLRISDKK
LQGILELIESIPKPTPATETYAPAKPFQMQRSTSVGTTQISQKMLPFLELPCVDDDSEEE
FFDAPCSPLDEPPQSPSELQSYQPKKFQKLYCSKNMIQCKIRFEVPEVLIQFYHLVGDCE
LPVVEVDVLGLGTDVEFRTFDLKANAFLKEFCLKCPEYFGANKKPIYLITTLDNTMEDLL
TLEYVKAEKNLPNLKSAYNNALQLIKVNFSSLDIHLHTEALLNTINYFNNILPQLEEKPA
PVSVAETEDKGEVIKKMSLKLPKNEDIITLQILAELSCLQIFIQDQKRNIAEIKIEGLDS
EIIMRPAATEINAKLRNIIVLDSDKTAVYKKAVYITGKEVFSFKMISFVDATAGSAYTDM
NVVDIQVNLTVGCIEVVFVTKFLYSILAFIDNFQAAKQALAEATAQAAGMAATGVKELAQ
RSSRMALDVNIKAPVVVIPQSPVSENVFVADFGLITMTNTFHIITESQSNPPPVIDLITI
RLSEMRLYRTQFLDDAYQEVLDLLLPLNLEVIVERNLSWEWYQEVPCFNINAQLKPMEFI
LSQEDITTIFKTLYSNIWYKEGGGASPAGVKDQNSVNSEATNASHHLEGTTVVTAAVVEI
HSQASQVKTTLNMSFRTDYLTMVLYSPGPDQTSFVDVRDPSLKLAEFKLENIISTAKMYT
DDSTFSSFSLKNCILDDKRPHVKKATPRMIGLTVGFDKKDMMDVKYRKVRDGWTSDLVLQ
EMYICASVEFLLTVANVFLEAYSTGTAVETSVQTWTAKEEVPVQESDKWEINIIIKNPEI
VFVADMTRSDAPALVLTTQCEICWKGDLENNTMTAAIKDLQVRACPFLPVKRKGKITTVL
QPCDLFYQATQISTDPQVIDISVKSLTLKVSPVIINTVITITSALYTSKDTIPPETTSSA
AHLWEKKDTKNLKMWFLEEPNETENKAPTTELVLKGEMIKVNVDSIFIVLEAGVGHRTVP
MLLAKSRFSGEGKNWSSLINLYCQLELEVHYYNEMFGVWEPLLEPLEIDQTEDFRPWNLG
IKMKKKAKKAIVESDTEEENYKVPEYKTVITFHSKDQLNITLSKCGLVMLNNLAKAFTEA
ATGASTVFIRDLAPFMILNSLGLTVSVSPSDSFSVLNVPLAKSYILKNEESLSMDYVGTK
DNDHFNAMTSLSSKLFFILLTPANHSTADKIPLTRVGRRLYTVRHRVSGVERSIVCQVDG
VEGSKKITIRSPVQIKNHFSIPLCVYEGNTLLGTASPGSEFNLPLTSYRSPLSLKPEDED
YQGCERIDFEEIIKNDGTFLKKKCRSKNTAKKPFIIHVVPEKDDLASLSVYSEDGWDLPY
IMHLWPPILLRNLLPYKIAYYIEGIEHKVYTLNEGHSAHICTVQLEKAKLHLKLLDYLNH
DWKSEYYIKPNQQDISFINFTCVTEIEKTDLDIAIHVTYNTGQTVVAFHSPYWMVNKTSR
MLQYKADGIHRKHPPNYKKPVLFSFQPKHFFNNNKVQLMVTDSELSDQFSIDTVGSHGAV
KCKGLKMDYQVGVTIDLSSFNITRIVTFTPFYMIENKSKYHISVAEQGNDKWLSLDLEQC
IPFWPEDASNALLIQVERNQGPPKKIHFNKQANCILLRLDNELGGIIAEVNLAEHSTVIT
FSDYHDGAAPFLLINHTKSDIVQYNQSSLSEIEDSLPPGKAVFYTWADPVGSRKLKWRCG
KSHGEVTQKDDMMTPINSGKKTIYLVSFFEGLQRIILFTEDPRVFRATYESEKAELAEQE
IVLALQDVGISLVNNYTKQEVAYIGITSSDVVWETKPKKKARWRPMSVKHTEKLEKEFKE
YTESSPAEDKVIELDTNIPVRFTPSGTNMKILQPHVIAIRRNYLPALKVEYSTSAHQSSF
RIQVYRIQIQNQIHGAIFPFVFYPIKPPKSVTMDSAPKPFTDVSIVMRSAGHSQISRIKY
FKVLIQEMDLRLDLGFVYALAELMTEAEGTEKTEVELFHKDIEAFQEEYKTASLADSSQV
SLYEYFHISPIKLHLSVSLRSGREEAKDSEQQEGLVAVRSLNLLLKSIGATLTDVQDVVF
KLAFFELNYQFHTASELQSEVIRHYSKQAIKQMYVLILGLEVLGNPFGLIREFSEGVEAF
FYEPYQGAIQGPEEFVEGMALGLKALVGGAVGGLAGAASKITNAMAKGVAAMTMDEDYQQ
KRREAMNRQPAGLREGITRGGKGLVSGFVSGITGIVTKPIKGAQKEGAAGFFKGVGKGLV
GAVARPTGGIIDMASSTFQGIKRATETSDEVESLRPPRFFNEDGVIRPYRLRDGTGNQML
QVIENGRFAKYKYFTHVMINKTDMLMITKSGVLFVTKGTFGQLTCEWQYSFDEFTKEPFI
VHGRRLRIEAKIPRTIWRGEHCSDLPPHPLDKPCMALAIEISKLFNERVKSVFHAKEFGK
IINFKTPEDARWILTKLEEAREPSPRF
NT seq
9624 nt
NT seq
+upstream
nt +downstream
nt
atggtgttcgagtcagtggtcgtagacgtgttgaaccggttcttgggggactatgtggtg
aacctggacacgtctcagctcactctgggcatctggggaggagctgtggccttgaagaat
cttgaaattaaagaaaatgctctgagtcaactggatgtaccttttaaagttaaagttggt
catataggtaatcttaatcttacaattccatggaaaaacctgtatactcaaccagttgaa
gctttcctgggagacatttatttactcatagtgccttcttctaaaataaaatatgatcct
ttaaaagaagaaaaacaactcttggaagcaaaacaacatgaacttaaacgaatagaagaa
gcaaaacaaaaagtagctgatcaagacaaacttcgggtggagaaacaagacacttttaca
gaaaaattaattactcagatcataaaaaatcttcaagtgaaaatttccaacatccatatt
cgttacgaggatgacatcacaaatcgagacaacccgctatcatttggtatttcccttcaa
aatctcagcatgcagacaactgatcaaaactgggttccatgtttacatgatgaaactgag
aaactgttccgtaagttaatccgattggacaacctttttgcctattggaatgtgaagtct
cagttgttttaccttaatgattatgatgaatcattggacagcttgaggaagggcattgtc
tatcgaaatattgttccggaaggttatgattttgtgtttcgccccatatctgctaatgcc
aaacttcagatgaatcggcgatcggattttgacttctctgcccccaagataaacctggaa
gttgagttacatgacatagcaattgaatttaataaaccacagtatttcagtgttatggag
cttcttgaatcaattgatatgatgacgcaaaatctgccatacaggaagttcaaacctgat
gtacctcttcactatcatgccagagactggtgggcttatgctatacatggtattcttgaa
gtgaatgtctgcccccggttacggatgtggtcatggaagcatattagagaacacaggcaa
aaaatgaagcagtataaagaactgtataaaaaaaagataacaactaagaagccagctggt
gaaattctcatctctttggaggagttggaaaagaccttggatgtatttaatataactata
tcaagacaacaggcagaagtggaggtaaagaaagctggatataggattttcagggaagga
gcaaaagattcagaggaaaacaaaggatggtttagctggctgtggagttggtcagaacca
aaaagtaaagaacaaccagatgttaagcctggaattcttgaagaaatgttgacatctgaa
gaaaaagctttactctatgaagcaattggctatagtgaaacagcagttgatccaaccttg
ccaaaaacatttgaagccatgaagttctttgttcacttgaaaagtatgtctgttgttcta
agagaaaaacgagggacacctgaactgttagatattgtagtggaagaatttagcactttg
attgtgcaaagaccaggagcacaagccattaaatttgaaaccaaaattgattcatttcat
gttactggcttaccagataattcgacaaaaccccgcctcctgtcttcattggatgatgct
acatcactcttccaaattatatttgaaataaatcctttagatgaaactgttgctcagagg
tgtatcatagaagctgaacctttagaaatgatatatgatgcaagaacagtaaatagtata
gtggacttcttcagacctccaaaagaggtaaatctagcacagctcacatcagcaactttg
acaaaacttgaagaatttcgtgacaagacagcaacaggtctactatatattattgaaaca
cagaaagttcttgatctcaaaattaatttgaaggcttcatatgttattatcccacaagat
ggaatttttagccctacatcaaatcttctacttttggatcttggtcatctaaaggtgaca
agtaaaagtcgttcggaattgccggatatgaaaccaggtggggccagtcttgaagagatc
atgcagagagcttatgattcctttgatgttcagcttacaagcatacagctgctttacagc
acagttggtgataattggagagaagcacgaaaactcaatgtatctacacagcatgttttg
gtacctatgcacttcaatgtggagctctcgaaggccatggttttcatggatataaggatg
cccaaattcaagatttttggaaagttaccactgatttctttacgaatctcagataaaaaa
ctgcaaggaattctggaattgattgaaagcattccgaaacccacacctgcaactgaaaca
tatgcccctgccaaaccatttcagatgcaaaggtccacctctgtgggaacaacacagatt
tcacagaaaatgcttcctttcttggaacttccatgtgttgatgatgattcagaggaagaa
ttttttgatgcaccgtgtagtcccttggatgaacctcctcaatctccctctgaacttcaa
agttatcagccgaagaagtttcaaaagctgtattgttcaaaaaatatgattcagtgtaaa
ataagatttgaagtgccagaggttttgattcagttttatcaccttgttggagattgtgaa
ctacctgtggtagaggttgatgttttagggttgggcacagatgtggaatttagaacattt
gatttgaaagcgaatgcctttttgaaagagttctgcctaaaatgcccagaatactttggt
gcaaacaagaaaccaatttatttgattacaacactggataatactatggaagatctgcta
accttggaatatgtgaaggctgaaaagaatctacccaacttgaaaagtgcttacaacaat
gctctgcaactgattaaggtgaatttttcctctttggatattcatttgcataccgaagca
cttctgaatacaataaattattttaataatatacttccacaattggaagaaaaaccagcc
ccagtgtctgttgcagagactgaagacaaaggagaggtcattaaaaaaatgtctttaaaa
ctacccaagaacgaggatattattaccttgcagattttagcagaattatcttgtttacag
atctttattcaagatcagaaacgtaacattgctgaaattaagattgaagggcttgattct
gagattattatgaggcctgctgcgactgaaattaatgcaaagctaaggaatataattgtt
ttggattctgataagacagctgtgtacaaaaaggctgtttacatcactggaaaagaagtg
tttagcttcaaaatgatttcttttgtggatgcaactgctggttctgcatacacagatatg
aatgtggttgacattcaagttaatttaactgttggttgcattgaagtagtttttgtcaca
aaatttctttattctatattggcttttatagataattttcaagcggctaaacaagccttg
gctgaggctactgctcaggctgcaggaatggctgctactggtgtgaaagaactggcacag
aggagttctagaatggcgctggatgttaacatcaaagccccagtggtggtcatcccacag
tctccagtttctgaaaatgtttttgttgctgattttggactaataacaatgacaaacaca
ttccatataataacagagagccagagtaaccccccacctgttattgatctgataacaata
aggctgagtgaaatgcggctgtacaggactcaatttcttgacgatgcataccaggaagta
ctagatctgctattaccattaaatcttgaggtgattgttgagcgaaatttatcttgggag
tggtaccaggaagttccttgttttaatataaatgctcagctaaagcccatggagttcatt
cttagtcaagaagatataacaactatttttaaaacattatacagcaatatatggtacaaa
gaaggtggtggtgcctcacctgcaggagtaaaagatcagaatagtgttaatagtgaggct
actaatgcttcccaccatttagaaggaacaactgtagtgactgctgctgtggtagaaatc
cattcacaggcctctcaagttaagacaacactgaatatgagcttcagaactgactatctc
accatggttctgtacagtccgggtcctgaccagacttcctttgtagatgttcgtgatcct
tctctgaaacttgctgaatttaagttggagaatatcataagcactgcaaaaatgtataca
gatgactcaacattttcttccttttcattaaaaaactgtattttagatgataaaaggcct
catgtcaagaaggcaactcctagaatgataggactgacagttgggtttgacaaaaaggac
atgatggatgtaaagtacagaaaagtcagagatggttggacaagtgatttagtccttcaa
gagatgtatatttgtgcaagtgtggaatttctgctgacagttgcaaatgtctttcttgag
gcctacagcacaggcactgctgtagaaaccagtgttcaaacatggactgctaaggaagaa
gtacctgtacaagaatcagacaaatgggaaattaatattattattaaaaatcccgaaatt
gtgtttgtggctgatatgacaagaagtgatgctcctgccttagtccttacaacacaatgt
gaaatttgttggaaaggtgaccttgagaacaatacaatgactgctgccattaaagatctt
caagtgagagcatgcccattccttccagtcaagagaaaaggcaaaatcactacggttttg
cagccctgtgacttgttctatcaagctactcagataagtacagatccacaagtgattgat
atatcagtaaagtccctcacactaaaggtttctccagttatcataaatactgtgattacc
ataacatcagcactttatacatccaaggataccatcccaccagaaactacttcttctgca
gctcatttatgggaaaagaaggatacgaagaatttaaaaatgtggtttcttgaagaacca
aatgaaactgaaaacaaagctcccacaactgaattggtactcaaaggagagatgataaaa
gtgaatgttgattctatttttatagttcttgaagctggagttggtcatagaaccgtgcct
atgctgttggcaaagtcacgtttttcaggggaagggaaaaactggagttccttgataaat
ctctactgtcagcttgaactagaagtgcattattataatgaaatgtttggtgtatgggag
cctttgcttgaacccttagaaattgatcagactgaggattttagaccatggaatcttgga
atcaagatgaaaaagaaagcaaaaaaggccattgttgaatcagatactgaagaagaaaat
tacaaagtgccagaatataaaactgttataactttccattcaaaagaccagctaaacatt
acattatccaaatgtggccttgtaatgttaaataatttagccaaggcttttacagaagct
gccactggagcttcaaccgtcttcatacgggatctagcgccatttatgattttaaattct
cttggacttactgtctctgtttcaccaagtgattcatttagtgtacttaacgttccattg
gcaaaatcatacatattgaaaaatgaggagagtttaagtatggactatgtgggaactaaa
gacaatgatcatttcaatgcaatgaccagcctaagcagtaaactcttcttcattctcctc
acacctgctaaccactctaccgctgataaaatccctttaacaagagtgggacgacgactg
tacactgtaagacacagagtgtctggagttgaaagatctattgtttgtcaagttgatgga
gtagaaggaagtaagaagataacaattcgctccccggtgcagattaaaaatcatttttca
atcccactttgtgtttatgaagggaatactttattgggaacggcttctcctggaagtgaa
ttcaacctaccattaacatcttaccgatcacccctttctctgaagccagaagatgaggac
tatcaagggtgtgaaagaattgactttgaagaaattataaaaaatgatggcacttttcta
aagaagaaatgtagatctaaaaacactgctaagaaaccgtttatcattcatgttgtccca
gaaaaagatgatttggcttctctgtcagtgtattcagaagatggctgggacttaccatac
ataatgcatttgtggccacctatcctgctccgaaatcttcttccttataaaattgcttat
tatatagaggggattgaacataaagtttatactctaaatgaaggacattcagcccatatt
tgtactgtgcagttggaaaaagccaaactacatttaaaattacttgactatcttaatcat
gattggaaaagtgaatattatataaaacctaaccaacaagatattagtttcatcaatttt
acctgtgttacggaaatagaaaagactgatttagatattgctatccatgtgacttacaat
accggccagacagttgtggcatttcatagtccttactggatggtcaataaaaccagtcgg
atgttacagtataaggcagatggaattcaccgaaagcatccacctaattataagaagcca
gttctgttttcttttcaaccaaagcacttttttaataataataaggttcagcttatggta
actgatagtgaattgtcagatcagttttcaattgatactgttggtagtcatggagctgtt
aaatgtaaaggcctgaaaatggactatcaagttggtgtcactatagacctcagcagtttt
aacattaccagaattgtgacatttactcctttttatatgattgaaaacaaaagcaaatat
catatatcagtggctgaacagggaaatgataaatggctctctcttgatttggagcagtgt
atccctttttggccagaggatgcttctaatgcacttcttattcaagttgaaagaaatcaa
ggccctcccaaaaagatacattttaacaagcaagcaaattgtattttattgcgtctggat
aatgagcttggaggtattatagcagaagttaacttagctgagcattctacggttattaca
ttttcagattatcatgatggagcagctcccttcctattaataaatcacactaagagtgac
attgttcagtacaatcaaagttccctcagtgaaatagaagattccctccctcccggaaaa
gcagtattttatacttgggctgatccagtgggctctagaaagctgaagtggagatgtgga
aaaagccatggtgaagtaacacaaaaggatgatatgatgacacctataaattcggggaaa
aagacgatttatttagtttcattctttgaaggcttacaacgcattattttattcactgaa
gatccaagggtattcagagcaacatatgaaagtgagaaagcagagttagcagagcaagaa
attgtgttggccttacaagatgttggaatttctctcgtcaacaattacacaaagcaggaa
gtagcctatattggcattacaagttctgatgtggtttgggagacaaagcccaagaagaag
gcaagatggaggccaatgagtgtaaagcatactgagaagttagagaaagaatttaaagaa
tatactgaatcttcacctgcagaagataaggttatcgaattggacactaacattccggtt
cgctttacacctagtggtactaacatgaaaattctgcagccacatgtaatagctataaga
agaaattatcttccagcattaaaagtagaatatagcacatctgcacatcagtcatcattt
agaattcaagtttacagaatacagatccaaaaccagatacatggtgctatatttccattt
gtgttttatccaattaaacctcccaagtcggtcaccatggattcagctccaaagcccttt
acagatgtcagtattgtcatgagatctgcagggcattcccagatatcacgtattaagtat
ttcaaggtgttgatccaagaaatggacctcaggttagatcttggatttgtctatgcgtta
gcagaacttatgacagaagccgaagggactgaaaaaactgaggttgaactttttcataaa
gatatagaagctttccaagaagaatataaaacagcttcattagcagattcatcacaagtc
agtctctatgaatacttccatatatctcctatcaagttgcatttaagtgtttcactgagg
tcgggaagagaagaagctaaagattcagaacaacaggaaggactcgtggccgttcgctct
ttaaatcttctgctgaagagtattggtgccacccttacagatgtacaagatgtagttttt
aagcttgcattttttgagctgaactatcagttccatacagcatctgaactacagtctgaa
gtaataagacactattcaaaacaggccattaagcaaatgtatgtactcattcttggactt
gaagttttgggaaatccctttggcttgattagagaattttctgaaggtgtggaagcattt
ttttatgaaccgtaccagggagccatccagggtcccgaagagtttgtggaggggatggca
ctaggactgaaggcattagttggtggagctgttggtggattagctggtgctgcctccaaa
atcaccaatgctatggctaaaggggtggcagctatgaccatggatgaagactaccagcag
aagaggagagaagccatgaataggcagccagccggtcttagagaaggcatcactcgtgga
ggaaaaggcttagtttctggttttgtaagtggcataacaggaattgttacaaaacctatc
aaaggagctcaaaaagaaggagcagctggtttctttaaaggtgttgggaagggtttagtt
ggagcagtggcaaggccaactggaggcatcatagacatggccagcagtacatttcaggga
ataaaaagagctacagagacttctgatgaagtggagagcctacggcccccacgattcttt
aatgaggatggagtcatcagaccttacaggttgagggatgggactggaaaccagatgtta
caggtcattgaaaatggaagatttgcaaaatataagtattttacccatgtcatgatcaat
aaaacagatatgctaatgataactaaaagtggtgtattgtttgtaacaaaaggaacattt
ggacagcttacctgtgagtggcagtatagttttgatgagtttaccaaagagccattcatt
gttcatgggagaagattacgcattgaagcaaagataccaagaactatctggaggggagaa
cactgctctgacttacctcctcatcctttggataaaccctgtatggctttggcaattgaa
atctcaaagctttttaatgagcgggtgaagtctgtgtttcatgccaaggagtttggaaaa
ataattaacttcaagaccccagaggatgctaggtggatcctcacaaaactagaagaggca
agagaaccttccccgagattctga
DBGET
integrated database retrieval system
