Mustela lutreola (European mink): 131813526
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Entry
131813526 CDS
T09578
Symbol
COL4A1
Name
(RefSeq) collagen alpha-1(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04151
PI3K-Akt signaling pathway
mlk04510
Focal adhesion
mlk04512
ECM-receptor interaction
mlk04820
Cytoskeleton in muscle cells
mlk04926
Relaxin signaling pathway
mlk04933
AGE-RAGE signaling pathway in diabetic complications
mlk04974
Protein digestion and absorption
mlk05146
Amoebiasis
mlk05165
Human papillomavirus infection
mlk05200
Pathways in cancer
mlk05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
131813526 (COL4A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131813526 (COL4A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131813526 (COL4A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131813526 (COL4A1)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
131813526 (COL4A1)
09154 Digestive system
04974 Protein digestion and absorption
131813526 (COL4A1)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
131813526 (COL4A1)
09162 Cancer: specific types
05222 Small cell lung cancer
131813526 (COL4A1)
09172 Infectious disease: viral
05165 Human papillomavirus infection
131813526 (COL4A1)
09174 Infectious disease: parasitic
05146 Amoebiasis
131813526 (COL4A1)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
131813526 (COL4A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlk04147
]
131813526 (COL4A1)
00536 Glycosaminoglycan binding proteins [BR:
mlk00536
]
131813526 (COL4A1)
Exosome [BR:
mlk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
131813526 (COL4A1)
Glycosaminoglycan binding proteins [BR:
mlk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131813526 (COL4A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
131813526
NCBI-ProteinID:
XP_058999836
LinkDB
All DBs
Position
13:2540066..2670906
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AA seq
1669 aa
AA seq
DB search
MVPRLGFWLLLLAAALLLHEERSRAAAKGGCAGSGCGKCDCHGVKGQKGERGLPGLQGVI
GFPGMQGPEGPQGPPGQKGDTGEPGLPGTKGTRGPPGAAGYPGNPGLPGIPGQDGPPGPP
GIPGCNGTKGEPGPLGPPGLPGFAGNPGPPGLPGMKGDPGEIIGYVPGTLLKGERGFPGP
PGAPGSPGLPGLQGPVGPPGFTGPPGPPGPPGPPGEKGQMGLSFQGPKGDKGDQGVSGPP
GVPGQAQVKEKGDFATKGEKGQKGEPGFQGMPGFGEKGEPGKPGPRGKPGKDGEKGEKGS
PGFPGDTGYPGPPGREGFKGDKGEAGPPGPPGIAIGPGPLGEKGERGYPGAPGLRGEPGP
KGFPGLQGQPGPPGFPVPGQIGAPGFPGERGEKGERGFPGTSLPGPSGRDGLPGPPGPPG
PPGQPGHTNGIVECQPGPPGVQGPPGIPGQPGLTGEIGEKGQKGDSCLICDTAGLRGPPG
PQGPPGEIGFPGQPGAKGDRGFPGRDGLEGLPGPQGAPGLMGQPGAKGEPGEIYFDARLK
GDKGDPGFPGQPGMPGRAGSPGRDGHPGLPGPKGSPGSVGLKGERGPPGGVGFPGSRGDT
GPPGPPGFGLPGPVGDKGQAGFPGNPGSPGQPGPKGEAGKVVPLPGPPGAQGLPGAPGFP
GPQGDRGFPGTPGRPGLPGEKGTVGQPGIGFPGPPGPKGVDGLPGDVGPPGSPGRPGFNG
LPGNPGVPGQKGEPGVGLPGLKGLPGIPGIPGTPGEKGNVGGPGVPGEHGAVGPPGLQGL
RGDPGPPGLQGPRGAPGAPGVGPPGAMGPPGGQGPPGSSGPPGVKGEKGFPGFPGLDMPG
PKGDKGSQGLPGLTGQSGLPGLPGQQGTPGVPGFPGPKGEMGVMGTPGQPGSPGPAGLPG
LPGQKGDHGFPGSSGPRGDPGFKGDKGDVGLPGKPGSMDEVHMGSMKGQKGDQGEKGQTG
PTGEKGSRGDPGTPGVPGKDGQAGQPGQPGPKGDPGIGGTPGAPGLPGPKGSVGGMGLPG
TPGEKGVPGIPGPQGVPGLPGEKGAKGEKGQAGLPGIGIPGRPGDKGDQGVTGFPGSPGE
KGEKGSAGIPGVPGSPGPKGSPGSVGYPGSPGLPGEKGDRGLPGSDGIPGSKGEAGLPGK
PGPTGPAGQKGEPGSDGIPGSAGEKGEPGLPGRGFPGFPGAKGEKGSKGDVGFPGQAGSP
GVPGAKGEQGFMGPPGPQGQPGLPGAPGHAVEGPKGDRGPQGQPGLPGLPGPVGPPGLPG
LDGLKGDKGNPGWPGAPGTPGPKGEPGFQGLPGIGGSPGITGSKGDMGPPGVPGFQGQKG
LPGLQGIKGDQGDQGFPGSKGLPGPPGPPGPYDIIKGEPGLPGPEGPAGVKGLPGPPGPK
GQQGVTGSVGLPGPPGVPGFDGAPGQKGETGPYGPPGPRGFPGPPGPDGLPGSMGPPGTP
SVDHGFLVTRHSQTTDDPQCPPGTKILYHGYSLLYVQGNERAHGQDLGTAGSCLRKFSTM
PFLFCNINDVCNFASRNDYSYWLSTPEPMPMSMAPVAGDNIRPFISRCAVCEAPAMVMAV
HSQTIQIPPCPSGWSSLWIGYSFVMHTSAGAEGSGQALASPGSCLEEFRSAPFIECHGRG
TCNYYANAYSFWLATIERSEMFKKPTPSTLKAGELRTHVSRCQVCMRRT
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atggtgccccggctcggcttctggctgctgctgctggccgccgccctcctgctccacgag
gagcgcagccgggccgctgcgaagggtggttgtgccggctctggctgtgggaagtgtgac
tgtcatggagtgaagggacagaagggcgaaaggggcctcccagggttgcaaggtgtcatc
gggtttcctgggatgcaaggacccgaggggccgcaggggccaccaggacaaaagggtgac
actggagaacccgggctgcccggaacgaaagggacaagaggacccccaggagcagcgggt
taccccggaaacccaggactgccgggtattcctggccaagacggtccccccggtcctcca
ggtatccctggatgcaacggaacaaagggtgagccagggcctctggggcccccgggtttg
cctggattcgctggaaatcccgggccgccagggttgccaggaatgaagggggatccgggt
gaaatcatcgggtatgtgcctgggaccctgttgaaaggtgaaagaggatttcctggaccc
ccaggagcaccaggctcgccaggactgccaggcctccagggtcctgtgggccctccagga
tttaccggaccaccaggtcctccaggccctcctggccctccaggtgaaaaggggcaaatg
ggcttaagttttcaagggccaaaaggtgataagggtgaccagggggtcagtgggcctccg
ggagtaccaggacaagctcaagttaaagaaaaaggagactttgccaccaaaggagaaaag
ggtcaaaaaggtgaacctggatttcagggaatgccagggtttggagagaaaggggagccc
ggaaagccagggccccgaggaaaacctggaaaagatggcgaaaaaggagaaaaagggagt
ccaggctttccaggcgacacggggtacccgggacccccaggccgcgaaggtttcaaggga
gacaaaggtgaagcaggtcctccaggcccacccggaattgcaatcggcccaggacccttg
ggagagaaaggagagcgggggtaccccggcgccccagggttgagaggagagccaggcccc
aaaggtttcccgggattgcaaggccagccaggccctccaggctttccagtaccagggcag
atcggagctcctggattcccaggggaaagaggcgagaaaggtgaacggggctttccgggc
acgtctttgccaggaccaagcggacgggatgggctcccgggcccccctgggcctcccggg
ccccctggacagccaggccacacaaatggaatcgtggaatgccagcctgggccgccaggg
gtccagggcccccccggaattccagggcagccagggctgacgggcgagattggagaaaaa
ggtcagaaaggagacagctgcctcatctgtgacacagcaggacttcgtgggccccctggg
ccgcagggtccccctggagaaataggtttcccgggacagccaggggccaagggcgacaga
ggctttcctggcagagatggtctggaaggattgcctggcccgcaaggcgcaccagggctg
atgggccagccgggagccaagggagagcctggcgagatttacttcgacgcgcggctcaaa
ggagacaaaggagaccccggctttccaggacagcccgggatgccaggcagagcagggtct
cctgggagagatggccatccagggctgcccggccccaaaggctccccggggtcggtagga
ttgaaaggagagcgtggcccccccgggggagttggattccccggcagtcgcggtgacacc
ggccctccagggcctccagggtttggccttcctggccccgttggcgacaaaggacaagcg
ggttttccagggaaccctggctccccaggccagccaggtcccaagggcgaagcaggaaaa
gttgtgcccctaccgggtccccctggagcacaaggacttccgggagccccaggcttccct
gggccacaaggtgaccgaggttttcctggaaccccaggaaggccgggcctcccgggagag
aagggcactgtcggccagcccggaatcggatttccagggccccctggccccaaaggtgtt
gacggcttgcctggggacgtggggcctcctggcagtccaggccgcccggggttcaatggc
ttacccggcaatccgggggtgcccggccaaaagggggagccgggagttggtctaccagga
ctcaaaggcttgccaggcattcccggcatccccggcacacccggggagaaggggaacgtc
gggggaccgggcgtcccgggagagcacggtgctgtcggccccccaggccttcagggactc
cgaggtgacccagggccgcctggattacaaggtcccagaggagctccaggagcccctgga
gtcggcccgcccggcgcgatgggaccccctggaggacagggaccaccagggtcctcaggc
cctcccggagtgaaaggagagaagggcttccccggatttccaggcctggacatgccaggc
cccaaaggagataaagggtcccaagggctcccaggcctgacgggacagtcggggctccct
ggcctccccggacagcagggcacacctggcgttcctgggtttccaggtcccaagggggag
atgggcgtcatggggaccccagggcagcccggctccccaggaccagcgggcctgccagga
ttgccaggacagaaaggggaccacggcttcccgggctcctcggggccccggggtgaccct
ggcttcaagggggacaaaggagacgtgggtctccccggcaagccgggctccatggatgag
gtgcacatgggcagcatgaagggccagaagggagaccaaggagagaaagggcagactgga
ccaaccggcgagaaggggtcccgcggcgaccccggaaccccaggagtgcctggaaaggat
ggccaggccgggcagcccgggcagccagggcctaaaggggacccaggcataggcggaacc
ccgggtgctccaggtctccctggacccaaaggatcggttggcggaatgggcctgccggga
acgcccggagaaaagggggtgcctggaatccccggcccgcagggcgtccctggcttaccc
ggggagaagggagcaaaaggagagaaaggccaggcgggcctgcctggcattggaattccg
ggccgtcctggggacaagggagatcaaggggtcacaggctttccggggagtcctggagag
aagggagagaaaggaagcgctggcatcccgggggtccccggctccccaggccccaaagga
tcgccggggagtgtcggctacccaggaagccctgggttgcccggagaaaagggggaccga
ggtctcccaggatcggacggcattcccggcagcaagggagaagcaggtcttcctgggaag
cctggccccacgggccccgctggccagaaaggggagcccggcagtgacggaatcccgggg
tcggcgggagagaagggtgaaccaggtctgcccggacgaggattcccagggtttccagga
gccaaaggagagaaaggttcaaagggcgacgtgggtttcccgggacaagccggcagccca
ggcgtccccggggccaaaggagagcaaggattcatgggtcccccggggccgcaaggacag
ccgggcttacctggagctccaggccacgctgtggagggacccaagggagaccggggccca
cagggtcagcccggcctgccagggcttcctggacctgtggggcctccagggctccctggg
cttgacggactcaaaggtgacaaaggaaacccaggctggccgggggcccccggaacccca
gggcccaagggagagccaggattccagggcctgcctgggattggtggctcgccagggatc
acgggctcgaagggtgacatggggcctccgggagtgccgggatttcaaggtcagaaaggc
ctccctggcctgcagggaataaagggcgatcaaggtgaccaaggcttccctggaagtaaa
ggccttcccggtcccccagggcccccgggaccctacgacatcatcaaaggggagccaggg
cttcctggccccgagggtcctgcaggtgtaaaggggctcccagggcctccaggccccaaa
ggacagcaaggcgtgacggggtccgtgggcttacccggaccgcctggtgttcctggtttt
gacggcgcccctggccagaaaggagagacaggaccctacggcccccctggtccacgaggg
ttcccgggcccgccaggccccgacggcttgccaggatccatgggccccccgggcaccccg
tctgtggaccacggcttccttgtgaccaggcacagtcagacaacagatgacccacagtgt
cctcctgggaccaaaattctgtaccacgggtactccttgctctacgtgcaaggcaacgaa
cgggcccacggccaggacctaggcacggccgggagctgcctgcgcaagttcagcacgatg
cccttcctcttctgcaacatcaacgacgtgtgcaactttgcgtcccggaacgactactcc
tactggctgtccacgcccgagcccatgcccatgtccatggcgcccgtcgccggggacaac
atccggccgttcatcagcaggtgtgcggtgtgtgaggcgccagccatggtgatggccgtg
cacagccagaccatccagatcccaccgtgccccagcggctggtcctccctctggattggc
tactccttcgtcatgcacaccagcgccggcgctgaaggttcgggccaggccctggcatcc
cccggctcttgtctggaggagttcaggagtgcgccgttcatcgagtgccacggccgcggg
acatgcaactactacgccaacgcttacagcttctggcttgccacgatcgagagaagtgag
atgttcaagaagcccacgccgtccaccttgaaggccggggagctgcgcacacacgtcagc
cgctgccaagtctgcatgaggagaacgtaa
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