Mustela lutreola (European mink): 131815166
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Entry
131815166 CDS
T09578
Symbol
SMG7
Name
(RefSeq) nonsense-mediated mRNA decay factor SMG7 isoform X1
KO
K14409
protein SMG7
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03015
mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09122 Translation
03015 mRNA surveillance pathway
131815166 (SMG7)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131815166 (SMG7)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Surveillance factors
Other surveillance factors
131815166 (SMG7)
mRNA cycle factors
Common to processing body (P body) and stress granule
131815166 (SMG7)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EST1_DNA_bind
EST1
TPR_2
Motif
Other DBs
NCBI-GeneID:
131815166
NCBI-ProteinID:
XP_059002820
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All DBs
Position
14:19516379..19609823
Genome browser
AA seq
1194 aa
AA seq
DB search
MRTGNLKSEEHLKSSNIRQAEVLKADMTDSKLGPAEVWTSRQALQDLYQKMLVTDLEYAL
DKKVEQDLWNHAFKNQITTLQGQAKNRANPNRSEVQANLSLFLEAASGFYTQLLQELCTV
FNVDLPCRVKSSQLGIISNKQTHTSAIVKPQSSSCSYICQHCLVHLGDIARYRNQTSQAE
SYYRHAAQLVPSNGQPYNQLAILASSKGDHLTTIFYYCRSIAVKFPFPAASTNLQKALSK
ALESRDEVKTKWGVSDFIKAFIKFHGHVYLSKSLEKLSPLREKLEEQFKRLLFQKAFNSQ
QLVHVTVINLFQLHHLRDFSNETEQHSYSQDEQLCWTQLLALFMSFLGILCKCPLQNKSQ
EESYNAYPLPAVKVSMDWLRLRPRVFQEAVVDERQYIWPWLISLLNSFHPHEEDLSSTNA
TPLPEEFELQGFLALRPSFRNLDFSKGHQGITGDKEGQQRQIRQQRLISIGKWIADNQPR
LIQCENEVGKLLFITEIPELILEDPSEAKENLILQEPSMVESLAADGNPGLKSVLSTGRN
LSNNCDPGEKPMVTFKENIKPREVNRDQGRSFPPKEVRRDYSKGITLTKNDGKKDNSKRK
TETKKCTLEKLQETGKQSVAVQVKSQTELRKTPVSEARKTPVTQTPSQASNSQFIPIHHP
GAFPPLPSRPGFPPPTYVIPPPVAFSMGSGYTFPAGVSVPGTFLQPTAHSPAGNQVQAGK
QSHIPYSQQRPSGPGPMNQGPQQPQPPSQQPLTSLPAQPTAQSTNQLQVQALAQQQSPTK
AVPALGKSPPHHSGFQQYQQADASKQLWNPPQVQGPLGKIMPVKQSYYLQSQDPIKLFEP
SLQPPVMQQQPLEKKMKPFPMEPYNHNPSEVKVPEFYWDSSYSMADNRAVMAQQANMDRR
GKRSPGVFRPEQDPVPRMPFEDPKGSPLLPPDLLKSLAALEEEEELIFSNPPDLYPALLG
PLASLPGRSLFKSLLEKPSELMSHSSSFLSLTGFSLNQERYPNNSVFNEVYGKNLTTSSK
TELNPSLAPQETSLYSLFEGTPWSPSLPASSDHSTPASQSPHSSNPSSLPSSPPTHNHNS
VPFSNFGPIGTPDNRDRRTADRWKTDKPAMGGFGIDYLSATSSSESSWHQASTPSGTWAG
HGPSMEDSSAVLMESLKSIWSSSMMHPGPSALEQLLMQQKQKQQRGQGTMNPPH
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
atgaggaccggaaacttgaaatcagaggagcatctgaaatcaagtaatattaggcaggca
gaagtcctgaaggctgacatgacagattctaagctgggtccagctgaggtctggacatcc
agacaggctctgcaggacctgtaccagaaaatgctagttactgatttggaatacgcgtta
gacaagaaagtagaacaggatctctggaatcatgcctttaagaatcagatcacaacacta
caaggccaggcaaagaatcgagcaaacccgaatcggagtgaagttcaggcaaacctttct
ctgttcctagaggcagctagtggcttctatactcagttattacaagaactatgtacagtg
tttaatgtagatttaccatgccgtgtgaagtcttcccaattgggaattatcagcaataaa
cagacgcataccagcgccatagtgaagccacagtctagctcctgttcctatatctgccag
cactgcctcgtccaccttggagacattgctcgatacagaaaccagaccagccaggcagag
tcctactacaggcatgcagctcagcttgtcccctctaatggtcagccttataatcagttg
gctatcttagcttcttccaaaggagaccatctgaccacaattttctactactgcagaagc
atcgctgtgaagttccctttcccagctgcctccactaatctacaaaaagcactttctaaa
gcactggaaagccgggatgaggtgaaaaccaaatggggtgtttctgacttcatcaaggcc
tttattaaattccacggtcatgtgtacctgagtaagagcttggaaaagttgagccctctt
cgagagaaattggaagaacagtttaagaggctgctattccagaaagctttcaactctcag
cagttagttcacgtcactgtcattaacctgtttcaacttcatcaccttcgtgactttagc
aatgaaacggagcagcatagttatagccaagatgagcagctgtgttggacacagttgctg
gccctctttatgtcttttcttggcatcctgtgcaagtgtcctctccagaacaagtctcag
gaggaatcctacaatgcctatccccttcctgcagtcaaggtctccatggactggctgaga
ctcagacccagggtctttcaggaagcagtggtggatgaaagacagtacatttggccctgg
ctaatttctctcctaaatagtttccatccccatgaagaggatctttcaagtactaatgct
acaccacttccagaggagtttgagttacaaggattcttggctttgagaccttctttcagg
aacttggatttttctaaaggccaccagggtatcacaggagacaaggaaggtcagcaacga
caaatacggcagcagcgcttgatctctataggcaaatggattgccgataatcagccaagg
ctgattcagtgtgaaaatgaggtagggaaattgttgtttatcacagaaatcccagagtta
atactggaagaccccagtgaagccaaagagaacctcattctgcaagaaccatccatggta
gagtccctggctgcggacgggaacccaggactgaaatcagtgctgtccacgggccgtaat
ctaagcaacaactgtgacccaggagagaagccaatggtcaccttcaaagagaacattaag
ccgcgagaagtgaacagagaccaaggaagaagttttcctcccaaagaggtgagaagggac
tatagcaaaggaattactttaactaagaatgatggaaagaaggacaacagcaagaggaaa
acagaaaccaagaaatgcaccttagaaaagttacaggaaacaggaaagcagagtgtggca
gtgcaggtaaaatcccagacagaactaagaaagactccagtgtctgaagccaggaaaaca
cctgtaactcaaaccccaagtcaagcaagtaactcccagttcatccccattcatcaccct
ggagccttccctcctcttcccagccggccagggttcccgccccccacatatgttattccc
cctcctgtggcattttctatgggctcaggttacaccttcccagctggtgtttctgtccca
ggaacctttcttcagcctacagctcactctccagcaggaaaccaggtgcaagctgggaaa
cagtcccacattccttacagccagcaacggccctctggaccagggccaatgaaccaggga
cctcaacaaccacagccaccttcccagcaaccccttacatctctaccagctcagccaaca
gcacagtctacaaaccagttgcaggttcaagctctagctcagcaacaatcccccacaaaa
gctgtgccggctttggggaaaagccctcctcaccactctggattccagcagtatcaacag
gcagatgcctccaaacagctgtggaatccccctcaggttcaaggcccattagggaaaatc
atgcctgtgaaacagtcctactaccttcagtcccaagaccccataaaactgtttgagccg
tcattgcaacctcctgtaatgcagcagcagcctctagagaaaaaaatgaagccttttccc
atggagccatataaccataatccctcagaagtcaaggtcccagaattctactgggattct
tcttacagcatggctgataacagagctgtaatggcccagcaagcaaatatggaccgcagg
ggcaaacggtcaccaggagtcttccgtcccgagcaggatcctgtgcccaggatgccgttt
gaggaccccaagggctcccctctgcttcctccggacctgttaaagagtctggctgccttg
gaggaagaggaagagctgattttttctaaccctcctgatctttacccagctttgctgggg
cctctcgcctctcttcctggacggagcctctttaaatccttgttggagaagccctcggag
ctcatgtcccattcctcttctttcttgtccctcaccggattttctctcaatcaggaaaga
tacccaaataacagcgtgttcaatgaggtatatgggaaaaacctgacaaccagctccaaa
acagaacttaatccttcgctggccccccaggagacatcactgtactccctcttcgaaggg
accccctggtctccatcacttcctgccagttcagatcattcaacaccagccagccaatct
cctcattcctctaacccaagcagcctgccaagctcccctccaacacacaaccataattct
gttccattctccaactttggacccattggaactccagataacagagatagaagaactgca
gatcggtggaaaactgataagccagccatgggtgggtttggcattgactatctctcagcg
acatcatcctctgagagcagttggcatcaggccagcactccaagtggcacctgggcaggc
catggcccctccatggaggattcctctgctgtcctcatggaaagcctaaagtctatctgg
tccagttccatgatgcatcctggaccttccgctctggagcagctgttaatgcagcagaag
cagaaacagcagcggggacaaggcaccatgaaccctccacactga
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integrated database retrieval system
