Mustela lutreola (European mink): 131816293
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Entry
131816293 CDS
T09578
Symbol
POLR2A
Name
(RefSeq) DNA-directed RNA polymerase II subunit RPB1
KO
K03006
DNA-directed RNA polymerase II subunit RPB1 [EC:
2.7.7.6
]
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03020
RNA polymerase
mlk03420
Nucleotide excision repair
mlk05016
Huntington disease
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
131816293 (POLR2A)
09124 Replication and repair
03420 Nucleotide excision repair
131816293 (POLR2A)
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
131816293 (POLR2A)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlk03021
]
131816293 (POLR2A)
03400 DNA repair and recombination proteins [BR:
mlk03400
]
131816293 (POLR2A)
Enzymes [BR:
mlk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
131816293 (POLR2A)
Transcription machinery [BR:
mlk03021
]
Eukaryotic type
RNA polymerase II system
RNA polymerase II
Core subunits
131816293 (POLR2A)
DNA repair and recombination proteins [BR:
mlk03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase II complex
131816293 (POLR2A)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_1
RNA_pol_Rpb1_5
RNA_pol_Rpb1_2
RNA_pol_Rpb1_6
RNA_pol_Rpb1_7
RNA_pol_Rpb1_3
RNA_pol_Rpb1_R
RNA_pol_Rpb1_4
Motif
Other DBs
NCBI-GeneID:
131816293
NCBI-ProteinID:
XP_059004866
LinkDB
All DBs
Position
15:complement(58933591..58956226)
Genome browser
AA seq
1970 aa
AA seq
DB search
MHGGGPPSGDSACPLRTIKRVQFGVLSPDELKRMSVTEGGIKYPETTEGGRPKLGGLMDP
RQGVIERTGRCQTCAGNMTECPGHFGHIELAKPVFHVGFLVKTMKVLRCVCFFCSKLLVD
SNNPKIKDILAKSKGQPKKRLTHVYDLCKGKNICEGGEEMDNKFGVEQPEGDEDLTKEKG
HGGCGRYQPRIRRSGLELYAEWKHVNEDSQEKKILLSPERVHEIFKRISDEECFVLGMEP
RYARPEWMIVTVLPVPPLSVRPAVVMQGSARNQDDLTHKLADIVKINNQLRRNEQNGAAA
HVIAEDVKLLQFHVATMVDNELPGLPRAMQKSGRPLKSLKQRLKGKEGRVRGNLMGKRVD
FSARTVITPDPNLSIDQVGVPRSIAANMTFAEIVTPFNIDRLQELVRRGNSQYPGAKYII
RDNGDRIDLRFHPKPSDLHLQTGYKVERHMCDGDIVIFNRQPTLHKMSMMGHRVRILPWS
TFRLNLSVTTPYNADFDGDEMNLHLPQSLETRAEIQELAMVPRMIVTPQSNRPVMGIVQD
TLTAVRKFTKRDVFLERGEVMNLLMFLSTWDGKVPQPAILKPRPLWTGKQIFSLIIPGHI
NCIRTHSTHPDDEDSGPYKHISPGDTKVVVENGELIMGILCKKSLGTSAGSLVHISYLEM
GHDVTRLFYSNIQTVINNWLLIEGHTIGIGDSIADSKTYQDIQNTIKKAKQDVIEVIEKA
HNNELEPTPGNTLRQTFENQVNRILNDARDKTGSSAQKSLSEYNNFKSMVVSGAKGSKIN
ISQVIAVVGQQNVEGKRIPFGFKHRTLPHFIKDDYGPESRGFVENSYLAGLTPTEFFFHA
MGGREGLIDTAVKTAETGYIQRRLIKSMESVMVKYDATVRNSINQVVQLRYGEDGLAGES
VEFQNLATLKPSHKAFEKKFRFDYTNERALRRTLQEDLVKDVLSNAHIQNELEREFERMR
EDREVLRVIFPTGDSKVVLPCNLLRMIWNAQKIFHINPRLPSDLHPIKVVEGVKELSKKL
VIVNGDDPLSRQAQENATLLFNIHLRSTLCSRRMAEEFRLSGEAFDWLLGEIESKFNQAI
AHPGEMVGALAAQSLGEPATQMTLNTFHYAGVSAKNVTLGVPRLKELINISKKPKTPSLT
VFLLGQSARDAERAKDILCRLEHTTLRKVTANTAIYYDPNPQSTVVAEDQEWVNVYYEMP
DFDVARISPWLLRVELDRKHMTDRKLTMEQIAEKINAGFGDDLNCIFNDDNAEKLVLRIR
IMNSDENKMQEEEEVVDKMDDDVFLRCIESNMLTDMTLQGIEQISKVYMHLPQTDNKKKI
IITEDGEFKALQEWILETDGVSLMRVLSEKDVDPVRTTSNDIVEIFTVLGIEAVRKALER
ELYHVISFDGSYVNYRHLALLCDTMTCRGHLMAITRHGVNRQDTGPLMKCSFEETVDVLM
EAAAHGESDPMKGVSENIMLGQLAPAGTGCFDLLLDAEKCKYGMEIPTNIPGLGAAGPTG
MFFGSAPSPMGGISPAMTPWNQGATPAYGAWSPSVGSGMTPGAAGFSPSAASDASGFSPG
YSPAWSPTPGSPGSPGPSSPYIPSPGGAMSPSYSPTSPAYEPRSPGGYTPQSPSYSPTSP
SYSPTSPSYSPTSPNYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSP
TSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPSYSPTSPS
YSPTSPNYSPTSPNYTPTSPSYSPTSPSYSPTSPNYTPTSPNYSPTSPSYSPTSPSYSPT
SPSYSPSSPRYTPQSPTYTPSSPSYSPSSPSYSPTSPKYTPTSPSYSPSSPEYTPTSPKY
SPTSPKYSPTSPKYSPTSPTYSPTTPKYSPTSPTYSPTSPVYTPTSPKYSPTSPTYSPTS
PKYSPTSPTYSPTSPKGSTYSPTSPGYSPTSPTYSLTSPAISPDDSDEEN
NT seq
5913 nt
NT seq
+upstream
nt +downstream
nt
atgcacgggggcggccccccctccggggacagcgcatgcccgctgcgcaccatcaagcga
gtgcaattcggagtcctcagtccggatgaactgaaacgaatgtctgtgacagagggcggt
atcaaataccccgagaccacagagggaggccgccccaagcttggggggctgatggacccg
aggcagggggtgatcgagcggaccggccgctgccagacctgtgcgggaaacatgacggag
tgtcctggccactttggccacatcgagctggccaagcccgtattccacgtgggcttcctg
gtgaagacgatgaaagtgttgcgctgcgtctgcttcttctgctccaagctgctcgtggac
tccaacaacccaaagatcaaggacatcttggccaagtccaaggggcagcccaagaagcgg
ctgacgcacgtgtatgacctgtgcaagggcaagaacatctgcgagggtggtgaggagatg
gacaacaagttcggggtggagcagccggagggcgacgaggatctgaccaaagagaagggc
catggtggctgcgggcggtaccagccccggatccggcgctcgggcctggagctatacgcg
gagtggaagcacgtcaatgaggactcccaggagaagaagatcctgctgagtcctgagcga
gtgcatgagatcttcaagcgcatctcagatgaggagtgcttcgtgctgggcatggagccc
cgctatgcgcggcccgagtggatgatcgtcaccgtgctgcctgtgcccccgctgtccgtg
cggcccgccgtggtgatgcagggttctgcccgcaaccaggacgacctgacgcacaagctg
gcggacatcgtgaagatcaacaaccagctgcggcgcaacgagcagaacggcgcggcagcg
cacgtcatcgctgaggacgtgaagctcctgcagttccacgtggccaccatggtggacaac
gagctgcctggcctgccccgcgccatgcagaagtcggggcgccccctcaagtccttgaag
cagcggctgaagggcaaggaaggccgggtccgagggaacctcatgggcaagcgcgtggac
ttctcagcgcgcaccgtcatcacccccgaccccaacctctccatcgaccaggtgggcgtg
cctcgctccatcgctgccaacatgaccttcgcagagattgtcacgcccttcaacatcgac
agactccaggagctggtacgcagggggaacagccagtacccgggggccaagtacattatt
cgggacaatggcgaccgtatcgacctgcgtttccacccgaagcccagtgaccttcacttg
cagaccggctacaaggtggagcggcacatgtgcgatggagacatcgtcatcttcaaccgc
cagccgactttgcacaaaatgtccatgatggggcatcgggtccgcatcctcccctggtct
actttccgcttaaatctgagtgtgacgactccttacaacgctgactttgacggggacgag
atgaacttgcacctgccccagtccctggagacgcgggcggagatccaggagctggccatg
gtgccacgcatgatcgtcaccccccagagcaatcggccggtcatgggcatcgtgcaggac
acgctcacggccgtgcgcaaattcaccaagagagacgtctttctggaacggggggaggtg
atgaacctgctgatgtttctgtccacgtgggacgggaaggtgccgcagccagccatactg
aagccacggcccttgtggacgggcaaacagatcttctccctcatcatccctggccacatc
aactgtatccgcacccacagtacccatccagacgacgaggacagcggtccttacaagcac
atctctcccggggacaccaaggtggtggtggagaacggggagctgatcatgggcatcctg
tgtaagaagtctctgggcacgtcggccggctctctggtgcacatctcttacctggagatg
ggccatgacgtcactcgccttttctactccaacattcagaccgtcatcaacaactggctg
ctgatcgagggtcacaccattggcattggggactccattgccgactccaagacctaccag
gacatccaaaacactattaagaaggccaagcaagatgtgatagaggtcatcgagaaagct
cataacaacgagctggagcccaccccggggaacaccctgcggcagaccttcgagaaccag
gtgaaccgcattctcaatgacgcccgagacaagaccggctcctctgcccagaagtccctg
tctgagtacaacaacttcaagtctatggtcgtgtctggggccaaaggttccaagatcaat
atctcccaggtcattgccgtcgtcggacagcagaacgtggaagggaaacggatcccgttt
gggttcaagcacaggaccttgcctcacttcatcaaggacgactacgggcccgagagccgc
ggcttcgtggagaactcttacctggcaggccttacgcccaccgagttcttcttccatgcc
atggggggtcgcgaggggctcatcgacacggccgtcaagactgctgagactgggtacatc
cagcggcggctcatcaagtccatggagtcggtgatggtgaagtatgacgccaccgtgcgc
aactccatcaaccaggtggtgcagctgcgctacggtgaggacggcctggctggcgagagc
gtcgagttccagaacctggccaccctgaagccgtcgcacaaggctttcgagaagaaattc
cgctttgattacacgaatgagagggcgctgcggcgcaccctgcaggaggacctggtgaag
gacgtgctgagcaacgcccacatccagaacgagctggagcgggagttcgagcgcatgcgg
gaggaccgggaggtgctcagggtcatcttccccaccggcgacagcaaggtggtgctgccc
tgtaacctgctgcgcatgatctggaacgctcagaaaatcttccacataaacccccgtctg
ccatccgacctgcaccccatcaaggtcgtagagggagtcaaggagttgagcaagaagctg
gtgatcgtgaacggggacgaccccctgagccggcaagcacaggagaacgccacgctcctc
ttcaacatccacctgcgctccacgctctgctcccgccgcatggccgaggagttccggctc
agtggggaggccttcgactggctgctcggggagattgagtccaagttcaaccaagccatt
gcccatcctggggagatggtgggtgccctggccgcacagtcccttggagaacctgccacc
cagatgaccttgaacacctttcactacgctggtgtgtctgccaagaacgtgaccctgggt
gtgccccgtctcaaggagctcatcaacatctccaagaagccgaagacgccttcgctcact
gtcttcctgctgggccagtctgctcgagacgctgagagggccaaggacattctgtgccgt
ctggagcatacgacactgaggaaggtgaccgccaacacagccatctactacgaccccaac
ccccagagcacggtggtggcagaggatcaggaatgggtgaatgtctactacgagatgcct
gactttgacgtggcccgcatctccccctggcttttgcgggtggagctggaccggaagcac
atgaccgaccggaagctgaccatggagcagattgccgagaagatcaatgcgggtttcggc
gacgacttgaactgcatctttaatgacgacaacgcggagaagctggtgttgcgcatccgg
atcatgaatagcgacgagaacaagatgcaagaggaggaggaagtggtagacaagatggat
gacgacgttttcctgcgctgcatcgagtccaacatgctgactgacatgaccctgcagggc
atcgagcaaatcagcaaggtgtacatgcacctgccgcagacagacaataagaagaagatc
atcatcacagaggacggggagttcaaggccctgcaggagtggatcctggagacggacggc
gtgagcctgatgcgggtgctgagcgagaaggacgtggaccccgtgcgcaccacgtccaac
gacatcgtggagatcttcacggtgctgggcattgaagccgtgcggaaggctctggagcgg
gagctgtaccacgtcatctcctttgacggttcctacgtcaattaccgccacttggctctg
ctgtgtgacaccatgacctgtcgaggccacctgatggccatcacccgacatggggtcaac
cgccaggataccgggcctctcatgaaatgctcctttgaggaaacggtggatgtgctgatg
gaggccgccgcacatggagaaagcgaccccatgaagggggtgtcggagaacatcatgctg
ggccagctcgccccagctggcaccggatgcttcgacctcctgctcgatgccgagaagtgc
aagtacggcatggagatccccaccaacatccccggcttgggggccgccggacccactggc
atgttcttcggctcagcgcccagccccatgggagggatttctccagccatgacgccctgg
aaccagggtgcaactccggcctatggagcctggtcccccagtgtcgggagtggaatgacc
ccgggggcagccggcttctcccccagcgccgcctccgacgccagcggcttcagccctggc
tactcgcctgcctggtctcccacgccgggctccccaggctcgcccggcccctccagcccg
tacatcccctcgccaggtggtgctatgtctcccagctactccccgacatcacccgcctat
gagcctcgctcccctggaggctatacacctcagagtccctcttactcccctacctcacct
tcctactcccccacctctccatcctactctccaaccagtcccaactacagccccacgtca
cctagctactctccgacctcgcccagctactccccgacttcgcccagctactccccgact
tctcctagctactccccaacctctcccagctattctccaacttccccaagctactctccc
acttctccaagctactctccgacctctcctagctactccccaacctctcccagctactcc
cccacctctcccagctattcccccacctctcctagctactcgccaacgtccccaagctac
tctcccacgtccccaagctactctcccacatccccaagctactcgccaacatccccaagc
tactcaccaaccagccctaactattctccaaccagtcccaattacaccccgacgtctcct
agctacagtccgacgtcaccaagctactccccgactagtcccaattacacgcccacgagc
cctaactacagcccaacctctccaagttactctccaacttcacccagctactccccaacc
tcgccaagctattccccgtcaagcccacgatacacaccacagtctccgacctataccccg
agctcccccagctacagccccagctcccccagctacagcccaacctcgccgaagtacacc
cccaccagcccctcgtacagccccagctccccagagtacaccccgacctctcccaagtac
tcacctaccagcccgaagtattcgcccacctcccccaagtactcacccactagccctacc
tactcgcccaccaccccaaagtactccccaacatctcctacttactcgccgacctctccg
gtctataccccgacctcccccaagtactcgcccaccagccctacctactcgcccacctcc
cccaagtactcacccaccagccccacctactcacctacctcccccaaaggctctacctac
tcacccacttccccaggctactcgcccaccagccccacctacagcctcaccagtccggcc
atcagcccggacgacagcgatgaggaaaactga
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integrated database retrieval system
