Mustela lutreola (European mink): 131817061
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Entry
131817061 CDS
T09578
Symbol
TNRC6C
Name
(RefSeq) trinucleotide repeat-containing gene 6C protein isoform X1
KO
K18412
trinucleotide repeat-containing gene 6 protein
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131817061 (TNRC6C)
03036 Chromosome and associated proteins [BR:
mlk03036
]
131817061 (TNRC6C)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
131817061 (TNRC6C)
Chromosome and associated proteins [BR:
mlk03036
]
Eukaryotic type
Gene silencing
piRNA pathway
131817061 (TNRC6C)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TNRC6-PABC_bdg
M_domain
Ago_hook
UBA_7
UBA
RRM_1
RRM_occluded
UBA_NBR1_C
THOC7
DUF4718
Motif
Other DBs
NCBI-GeneID:
131817061
NCBI-ProteinID:
XP_059006430
LinkDB
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Position
15:complement(3671588..3820126)
Genome browser
AA seq
1940 aa
AA seq
DB search
MEEKKKKKQEEKKKKEGAQKKAADQKTKVPEPTKTCSSQPQPAGTSTSTCTSTLSSSSNG
KRVPASSQQPAASRYLPREVPPRFRQQEQKQLLKRGQPLPTGALTGVSPTQGAGPTGVSP
PPLPGAGAQQHPSKLQPDLSHGGLADHYESPHWGQQPTYRGEAGSSWEKVIRDRTDKEAW
PSITGAETDSASECTTDTDSASNCGSENSSMATGSAQGTFTGHSKKTNGNNGPNGALVQS
PSNPSALGAGGAGGNGNGARVWAVATGSSSGPAHCSLSGGDGKVDNMIGEGRSQNCWGAS
NSNTGINLNLNPNANPAAWPVLGHEGTVATGNPSSICSPVSAIGQNTGNQNGNPTGTLGA
WGNLLPQESTEPQTSTSQNVSFSVQPQNLNTDGPNNTNPVNSSPNPVNAMQTNGLPNWGM
AVGVGAMVPPHLHGLPGASGPSVSQGSGSGAEGISSSVWGLSPGNPAPGSGNSGFGQGNG
DTVNSALSAKQNGSSSAVQKEGSGGSAWDSGPPAGPGLLAWGRGSGNSSGVSHIHSGAWG
HPSRSTSNGVNGEWGKPPNQHSNSDVSGKGSATWDSPSASSQNPAVQPGSEHMNSWAKAA
SSGTTASEGSSDGSGSRSEGSSGREGAEGRRRDKGMIDQGHLQLPRNDLDPRVLSNTGWG
QTPVKQNTAWEFEESPRSERKNDNGTEAWGCAATQPSNSGGKSDGSIVNSTNTSSVSGWA
SAPPAAGPASTGWGDGSSKAPSGPGVWGDSISSTAVSNAAAATKGGHAWSGTVNQEDKSP
TWGEPQKPKSQNWGDGQKSNPAWSAGGGDWADSSSVLGHLGDGKKNGSGWDADGNRSGSG
WNDAPRSGPGGWGNGTHTKGNPGTNWGESLKPGPQQTWAGKPQDNSVSNWGGAASVKQTG
TGWIGGPVPVTQKDGSEATGWEEPSPPSIRRKMEIDDGTSAWGDPSSYHNKTVNMWDRNN
PGLQSSATAATAAASAPASSSADVAETPPPHPAGVQLSRSPLLGPVSAGWGEMPNVHSKA
ESSWGEPSSPSALVDNGTAAWGKPPSSGSGWGDPPVEPPVTFGRASAPAAAPALCKPASK
SMQEGWGSGGDDMNLGTSQWEDEEGGVWNNAASQESASSCSSWGSAPKKGLPKGMKTSGK
QDEAWIMSRLMKQLTDMGFPREPAEEALKSNNMNLDQAMSALLEKKVDVDKRGLGVTDYN
GVVTKALGCRPPVSKDSSGDRPTFLDKLTLSFSNQDSGLVEEPTTSPFLPSPSLKLPLSN
SALPNQALGGIASGLGMQNLNSSRQIPSGNLGMFGSSGAAQARTMQQPPQPPVQPLSSSQ
PSLRAQVPPFLSPQVQAQLLQFAAKNIGLNPALLTSPINPQHMTMLNQLYQLQLAYQRLQ
IQQQMLQAQRNVSGPMRQQEQQVARTITNLQQQIQQHQRQLAQALLVKPPPPPHLPLHPS
AGKSAMDSFPPHSQAPGLPDLQTKEPQASPSTFAPYPLAGLNPNMNVNSMDMTGGLSVKD
PSQSQSRLPQWTHPNPMDNLPGAASPLDQNPSKHGAIPGGLSIGPPAKSSIDDSYGRYDL
IPNSESPASPPVAVPHSWSRAKSDSDKISNGSSINWPPEFHPGVPWKGLQNIDPENDPDV
TPGSVPTGPTINTTIQDVNRYLLKSAGSSPPSSQSAALPSSSAWPLSASGYGRSFSSIAP
APSIAGKLSDIKSTWSSGPASHTQASLSHELWKVPRSTAAPTRPPPGLANPKPSSTWGAS
PLGWTSSYSSGSAWSTDTSGRTSSWLVLRNLTPQIDGSTLRTLCLQHGPLVTFHLNLTQG
NAVVRYSSKEEAAKAQKSLHMCVLGNTTILAEFAGEEEVNRFLAQGQALPPTSSWQSSTG
TGQTRLGASGSSHGLVRSDAGHWSAPCLAGKGSSDLLWGGVPQYSSSLWGPPSSDDGRVI
GSPTPLNTLLPGDLLSGESI
NT seq
5823 nt
NT seq
+upstream
nt +downstream
nt
atggaagaaaagaaaaagaaaaagcaggaagaaaagaaaaagaaggaaggtgctcagaaa
aaggctgctgatcaaaaaaccaaagtgccagaacctactaagacctgttcaagccagccc
caacctgccggtaccagtaccagcacttgcaccagcactctgtccagcagcagcaatggc
aaacgtgtgcctgccagcagccagcagccagctgcctcccgttacctgcctcgcgaggtg
cctccacgcttccgccagcaagaacagaagcagctgttaaagagagggcagccgctgccc
acgggggctctgaccggtgtgagcccgacccagggggctgggcccacaggggtaagccct
cctcccctccccggagccggagcacagcagcaccccagtaagctccaaccagatctcagt
cacggcgggttggcagatcactatgaaagcccccactggggacagcagcccacatacaga
ggtgaagccggcagcagctgggagaaagtgatcagagacaggactgacaaggaggcgtgg
ccttccatcacaggagcggagacggactctgcctcagaatgtactacagacactgactct
gcctccaactgtggctcagagaacagtagcatggctacggggagtgcccagggcaccttc
accggccacagcaagaagactaatggcaacaacggccccaacggcgcgcttgtccaaagc
ccttctaacccgagcgccctcggagcgggcggcgccggcggtaatggaaatggagccaga
gtgtgggccgtagccacaggctctagctccggcccggctcactgctccctcagcggtggg
gatggaaaagtggacaacatgatcggagaggggagaagtcagaattgctggggtgcttcc
aactccaacacaggcattaatcttaaccttaaccctaatgccaacccagccgcctggcct
gtacttggacatgaaggaactgtggcgacaggcaacccttccagtatttgcagtccggtc
agtgccataggtcaaaatacgggcaaccagaacgggaacccaacaggcactttaggtgct
tggggaaacttgctgccgcaagagagcacagaaccacaaacatccacttctcagaatgtg
tctttcagcgtacaacctcagaaccttaacactgatggaccaaataacactaaccccgtg
aactcttcaccaaaccctgtcaatgcaatgcagaccaacggactgccaaactggggcatg
gctgtgggcgtgggggccatggtcccgcctcacctgcacggccttccgggtgctagcgga
ccatccgtttctcaaggcagcgggagcggtgctgaaggaatcagcagttcggtgtgggga
ctgtccccaggtaaccctgccccaggaagtggcaattctgggttcggtcaggggaatgga
gacactgtgaactcagcattgagtgctaaacaaaatggatccagcagtgctgtgcagaag
gaaggaagcggaggaagcgcctgggactcgggccctcctgccggccctgggctcctcgcc
tggggacggggcagtggcaacagcagcggcgtcagtcatatccattcgggagcttggggc
caccccagccggagcacctctaatggtgtgaatggggaatggggcaagcccccaaaccag
cattccaacagcgacgtcagtgggaaagggtcagcgacgtgggacagtccgagcgctagc
agccagaatcctgccgtgcagcccggcagtgagcacatgaactcttgggccaaagcggcg
tcttctggaacgacagccagtgaaggaagcagcgacggctctggcagtcgcagtgaagga
agctcggggcgggaaggagcggaaggccggaggcgggataaagggatgatagaccaaggg
cacctccaattgccaaggaacgatcttgacccaagagttctgtctaatactggttgggga
cagactccagtaaagcaaaacactgcctgggaatttgaagagtcccctaggtctgagaga
aaaaatgacaatgggacagaggcctggggctgtgccgctactcagccttcaaactcaggg
gggaagagtgacgggtccatcgtgaacagtacaaatacctcttcagtgtccgggtgggcc
agcgcgccgccggctgctgggccagcaagcacaggctggggagacggcagcagcaaagcg
cccagtggcccaggggtttggggggactcgataagctctactgctgtcagtaatgctgct
gccgccaccaagggtggccatgcttggagtgggaccgtaaatcaggaggacaagtcgcct
acctggggggagcctcagaaacccaaatctcagaactggggagatggacaaaaatctaat
ccggcctggagtgcaggagggggagactgggccgattcatcttctgtcctcggacacttg
ggggacgggaagaagaatggctctggctgggatgctgacggtaaccggtccggctctggc
tggaacgatgcgcccaggtccgggcccggtggctggggtaacggcacacacacaaagggg
aacccagggacaaactggggcgagtctttaaaacccggcccccagcagacctgggcgggc
aaaccccaagacaacagtgtgagtaactggggaggagccgcttccgtgaaacagaccgga
accggctggatcggggggccggtccccgtcacacagaaggacggcagcgaggccacgggc
tgggaggaaccttctccgccgtccattcggcgcaaaatggaaatcgatgacgggacctca
gcttggggcgacccgagcagctaccacaacaagactgtgaacatgtgggataggaacaac
ccaggcctgcagagcagtgccacagccgccaccgccgcagcctccgcccccgcgagcagc
agtgcggacgtggccgagacgccgccgccgcacccggccggcgtccagctcagtcggtcg
ccgctgctcggcccagtctcagcgggctggggagagatgcctaacgtccactcaaaggcc
gagagctcctggggagagccgtcctccccctccgccctggttgacaacggcactgcagcg
tggggcaagccgcccagcagtggcagcggatggggggacccccctgtggagccgccagtg
acattcgggagagccagcgcccccgccgccgccccagccctgtgcaaaccagcttcaaaa
tctatgcaagaaggctggggcagtggtggggacgacatgaaccttggcaccagtcagtgg
gaagacgaagaagggggcgtgtggaataatgctgcttcccaagaaagcgcctcctcctgc
agttcctgggggagcgcccccaaaaaaggactcccaaagggcatgaaaacgtctggcaag
caggatgaggcctggatcatgagccggctgatgaaacaactcacagacatgggcttcccg
agagagccggctgaagaggccttgaagagcaacaacatgaatctcgaccaggccatgagc
gccctgctggaaaagaaggtggacgtggacaagcgtggactgggagtgaccgactacaat
ggagtggtcaccaaagcccttggctgccgcccaccagtctccaaagactcttccggggac
cgccccacctttctcgacaagctgaccctttctttctccaatcaggacagcggcctagtg
gaagagcccacgacttcaccgtttttgccttcaccaagcctgaagctccccctttcaaac
agtgcactccctaatcaggccctgggtgggattgcctcagggctgggcatgcaaaacttg
aattcttctagacagatcccgagtggcaatctgggcatgttcggcagtagcggagcagca
caagccaggaccatgcaacagccgccgcagccccccgtgcagcctctgagctcctcccag
cccagcctccgtgctcaagtgcctccgtttctatcccctcaggttcaagcacagcttttg
cagtttgcagcaaaaaacattggtctcaaccctgcactattgacctcgccaatcaatcct
cagcatatgacgatgttgaaccagctctatcagctgcagctggcgtaccaacgtttacaa
atccagcagcagatgctacaggctcagcgtaatgtttccggacccatgagacaacaggag
cagcaagtcgcgcgcacaatcacgaacctgcagcagcagatccagcagcaccagcgccag
ctggcccaggccctgctcgtgaagccgccgccgccgccgcacctgcctctgcatccctct
gcaggcaaatcggccatggacagcttccccccgcactcccaggcccccggcctgcctgac
ctgcagaccaaagagccgcaggcttcacccagcaccttcgctccttaccctctcgctgga
ctgaacccaaacatgaatgtcaacagcatggacatgactggtggcttgtcggtaaaggac
ccgtctcagtcccagtcacgcctccctcagtggacacaccccaacccgatggacaactta
cccggtgctgcttctcccctcgatcagaaccccagcaagcatggtgctatccctggaggt
ctaagcatcgggcctccagcgaagtcctccattgacgactcctatggccggtatgactta
atcccgaatagtgagtcaccagccagtcctcctgtagctgtcccccatagctggtcgcgt
gccaaatctgacagtgacaaaatctccaacggctccagcatcaactggcccccagaattc
catcctggagttccatggaaaggacttcagaatatagaccccgagaacgaccccgatgtc
actcctggaagtgtccccaccgggcccactatcaataccaccatccaggacgtcaaccgc
tacctcctcaagagtgcggggtcctccccaccgtcatctcagagtgccgcgctgccttcc
tcgagtgcctggccgctcagtgcctccggctacggtcgctctttcagcagcatcgcgccc
gcgcccagcattgcaggtaaactgtcagacatcaaatcgacgtggtcctccggccctgcc
tcccacacacaagcctctctgtctcacgagctgtggaaggtgcccagaagcactgctgcc
cccacaaggccacctccagggttagccaatcccaagccttcctccacctggggagccagt
cccctcggctggaccagctcttactcctcgggttctgcctggagcaccgacacctcagga
cggacaagcagctggctcgttctccgcaacctcacgccccagatcgacggctccaccctg
cggacgctgtgtttgcagcacgggcctctcgtcaccttccacctgaacctgactcaaggc
aacgccgtggtccgctacagctccaaggaggaagccgccaaggcccagaagtccctgcac
atgtgtgttctgggaaacactaccatcttggccgagtttgccggcgaagaagaggtgaac
cgtttcttagcccaaggccaagcgctgccacccacctccagctggcagtccagcacgggg
accggccagacgcggctgggcgcctcgggcagctcccacggcctggtgcgcagtgacgct
ggccactggagtgccccgtgtctggccggcaaaggaagcagtgacctgctgtggggcggg
gtcccccaatactccagcagcctgtggggcccgcccagcagtgacgacggccgggtcatc
ggaagccccaccccgctgaacactctgcttcctggcgaccttctcagtggggaatccatc
tag
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