Mustela lutreola (European mink): 131817538
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Entry
131817538 CDS
T09578
Symbol
SHANK1
Name
(RefSeq) SH3 and multiple ankyrin repeat domains protein 1 isoform X1
KO
K15009
SH3 and multiple ankyrin repeat domains protein
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04724
Glutamatergic synapse
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09150 Organismal Systems
09156 Nervous system
04724 Glutamatergic synapse
131817538 (SHANK1)
BRITE hierarchy
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Gene cluster
GFIT
Motif
Pfam:
Ank_2
Ank
Ank_4
SAM_1
Ank_5
SH3_2
SAM_2
PDZ_6
PDZ
SH3_1
SH3_9
FERM_f0
SAM_PNT
Motif
Other DBs
NCBI-GeneID:
131817538
NCBI-ProteinID:
XP_059006996
LinkDB
All DBs
Position
16:54632748..54679519
Genome browser
AA seq
2187 aa
AA seq
DB search
MTHSPASSEDEERHSASECPEGGSESDSSPDGPSRGPRGTRGQGSGAPGSLASTRGLQGR
SMSVPDDAHFSMMVFRIGIPDLHQTKCLRFNPDATIWTAKQQVLCALSESLQDVLNYGLF
QPATSGRDANFLEEERLLREYPQSFEKGVPYLEFRYKTRVYKQTNLDEKQLAKLHTKTGL
KKFLEYVQLGTSDKVARLLDKGLDPNYHDSDSGETPLTLAAQTEGSVEVIRTLCLGGAHI
DFRARDGMTALHKAACARHCLALTALLDLGGSPNYKDRRGLTPLFHTAMVGGDPRCCELL
LYNRAQLGIADENGWQEIHQACQRGHSQHLEHLLFYGAEPGAQNASGNTALHICALYNKE
TCARILLYRGANKDVKNNNGQTPFQVAVIAGNFELGELIRNHREQDVVPFQESPKYAARR
RGPPGAGLTVPPALLRANSDTSMALPDWMVFAAPGTSSSGAPGPTSGPQGQSQPSAPSTK
LSSGTLRSASSPRGARARSPSRGRHPEEAKRQPRGRPSSSGTPREGPAGGTGGSGGPGGS
LGSRGRRRKLYSAVPGRSFMAVKSYQAQAEGEISLSKGEKIKVLSIGEGGFWEGQVKGRV
GWFPSDCLEEVANRSQEGKQESRSDKAKRLFRHYTVGSYDSFDAPRSLMDGIGPGSDYII
KEKTVLLQKKDSEGFGFVLRGAKAQTPIEEFTPTPAFPALQYLESVDEGGVAWRAGLRMG
DFLIEVNGQNVVKVGHRQVVNMIRQGGNTLMVKVVMVTRHPDMDEAVHKKAPQQAKRLPP
PAISLRSKSMTSELEEMVSPWKKKSEYEQQPAPVPSMEKKRTVYQMALNKLDEILAAAQQ
TISASESPGPGGLASLGKHRPKGFFATESSFDPHHRSQPSYERPSYLPPGPGLMLRQKSI
GAAEDDRPYLAPPAMKFSRSLSVPGSEDIPPPPTTSPPEPPYSTPPAPSSSGRLTPSPRG
GPFNPSSGGPLPSSSPASFDGPSPPDTRVGSREKSLYHSGPLPPAHHHPPHHHHHHAPPP
QPHHHHAHPPHPPEMETGGSPDDPPPRLALGPQPSLRGWRGGGPSPTPGAPSPSHHGSGG
GGISSSQAPALRYFQLPPRAASAAMYVPARSGRGRKGPLVKQTKVEGEPQKGGGLPAAAS
PTSPASPQPPPAAAAPSEKNSIPIPTIIIKAPSTSSSGRSSQGSSTEAEPPTQPEAAGGG
GGGGGGGGGGGGGSSAGGSSAPSPAPAMSPVPPSPSPVPTPTSPSGPATLDFTSQFGAAL
VGAARREGGWQNEARRRSTLFLSTDAGDEDGGDSGLGPGAPPGPRLRHSKSIDEGMFSAE
PYLRLESAGAGSGGGYGAYAAGSRAYGGSGGSSAFTSFLPPRPLVHPLTGKALDPASPLG
LALAARERALKESSEGGGPPQPPPRPPSPRYEAPPPTPHHHSPHAHHEPVLRLWGASPPD
PARRELGYRAGLGSQEKSLPASPPAARRSLLHRLPPTAPGVGPLLLQLGPEPPPPLPGVN
KAWRSGAPEEPERLPLHVRFLENCQPRASGAGGRGPPSEDGPGVPPPSPRRSVPPSPTSP
RGTEENGLPLLVLPPPAPSVDVEDGEFLFVEPLPPPLEFSNSFEKPESPLTPGPPHPLPD
PPTPTTPLPPVPPPAVAAAPPTLDSTASSLTSYDSEVATLTQGAPVAPGDPPPPGPPAPA
APAAPAPQPGPDPPPGTDSGIEEVDSRSSSDHPLETISSASTLSSLSAEGGGPAGGGGGG
GGASVASGPELLDTYVAYLDGQAFGGSGTPGPPYPPQLMTPSKLRGRALGTSGGLRPGPS
GGLRDPVTPTSPTVSVTGAGTDGLLALSGCTGPSTAGMAGGPVAIEPEGPPVPLPSASSL
PRKLLPWEEGPGPPPPPLPGPLAQPQASALATVKASIISELSSKLQQFGGSSAAGGALPW
ARGGSGGSGDSHHGGSSYVPERTSSLQRQRLSEDSQSSLLSKPVSSLFQNWPKPPLPPLP
TGSGVPPSAAAASGATSPSASSSTSTRHLQGVEFEMRPPLLRRAPSPSLLPASEHKVSPA
PRPSSLPILPSGPLYPGLFDIRSSPTGGAGGSADPFAPVFVPPHPGMSGGLGGALSGASR
SLSPTRLLSLPPDKPFGAKPLGFWTKFDVADWLEWLGLAEHRAQFLDHEIDGSHLPALTK
EDYVDLGVTRVGHRMNIDRALKFFLER
NT seq
6564 nt
NT seq
+upstream
nt +downstream
nt
atgacccacagccccgcgtcaagcgaggacgaggaacgccacagtgccagcgagtgtccc
gaggggggctcagagtccgacagctccccagacgggcccagcagaggcccccgggggacc
cggggccagggcagcggagcacctggtagtctggcctccacccgaggcctccagggccgc
tccatgtctgtcccagacgacgcccacttcagcatgatggtcttcaggattggcatcccg
gacctgcaccagacaaaatgtctgcgcttcaaccctgatgccaccatctggacagccaag
cagcaggtgctttgcgccctgagcgagagcctgcaggacgtgcttaactacggtctgttc
cagccggccacctcaggccgcgatgccaacttcctggaggaggagcggctgctccgggag
taccctcagtcttttgagaagggggtgccctacctggagttccgttataagacccgggtt
tacaagcagaccaacctggatgagaagcagctggccaaattgcacacgaagacggggttg
aagaagttcctggagtacgtgcagctcgggacgtctgacaaggtggcgcggctgctggac
aaggggctggaccccaattatcatgactcagattcaggagagacccccctgactctggct
gcccagacggaaggctccgtggaagtgattcgaaccctgtgcctgggaggggcccacatc
gacttccgagcccgggatggcatgacagcactgcacaaagctgcatgtgcccgtcattgc
ctcgctctcacggcactcctggaccttgggggctcccccaactacaaggaccgccgaggc
ctgacccctctgttccatacggctatggtggggggcgacccccgctgctgtgagctgctc
ctttacaacagggcccagctgggcatagctgatgagaacggctggcaggagattcaccag
gcctgccagcggggtcattctcagcacctggaacacctgctcttctacggggctgagcct
ggagcccagaacgcctcggggaacacggcattgcacatctgcgccctctacaataaggag
acctgtgctcggattctcctctatcgaggagccaacaaggatgtgaagaataacaacgga
cagacccccttccaggtggcagtgatcgctgggaattttgaactgggggagttgatccga
aaccatcgagaacaggatgtggtgcccttccaggagtcccccaagtatgcagcccggcga
cggggacccccaggcgcagggctgacggtgcccccagcgctgcttcgggccaacagtgat
accagcatggccctgcccgactggatggtgtttgccgccccggggacctcatcctctggg
gcccctggccctacttcagggccccagggccagtcacagccctcagcccccagcaccaag
ctcagcagtgggaccctccgaagtgccagcagcccccggggtgcacgggctcgctcccca
tcccgcgggaggcaccctgaagaggccaagaggcagccccgtggacggcccagctccagc
gggacgcccagggaagggccggcagggggcacggggggctcggggggccctgggggctcc
ctgggcagccgtgggaggcgtaggaagctctactcagccgtacctggacgctccttcatg
gccgtgaagtcctaccaggcccaagcggagggggagatctccctgagcaagggggagaag
atcaaagtgcttagcatcggggaaggaggcttctgggaaggccaggtcaaaggtcgtgtt
ggctggtttccctcggactgcctagaagaggtggcgaaccgctcccaggaaggaaaacaa
gaaagccgcagtgacaaggcaaagagactcttccggcattatactgtgggctcctacgac
agctttgatgccccaagaagcttgatggatgggattggcccagggagcgattacatcatt
aaggagaagacagtcttgctgcagaagaaggacagtgaggggtttgggttcgtgctccgg
ggggccaaggcgcagacccccatcgaggagttcacccccaccccggccttcccggcgctg
cagtatctggagtctgtggatgaggggggtgtggcatggcgagctggactgcggatggga
gacttcctcatcgaggtgaacgggcagaatgtggtgaaggttggccaccggcaggtggtg
aacatgatccgacaagggggcaacacgctgatggtcaaggtggtgatggtcaccaggcac
ccggacatggatgaggctgtccataagaaagcaccccagcaggcgaagcggctcccgcct
ccagccatttctctgcgttcaaagtctatgacctcagagctggaggagatggtctccccc
tggaagaagaagagtgagtacgagcagcagccggcgccggtgcccagcatggagaaaaag
cggacagtgtatcagatggcactcaacaaactggatgaaattttggcggcagctcagcag
accatcagtgcaagcgagagtcctggacctggtggccttgcatcgctgggcaaacaccgg
cccaaaggcttctttgccactgagtcaagcttcgatccgcaccaccgctcgcagccgagt
tatgaacgtccttcttacctgcctccaggacctgggcttatgctccggcaaaaatctatt
ggggctgcagaagatgatagaccgtacctagcacccccagccatgaagttcagccgcagc
ctgtctgtgcctggctcggaggacatccccccaccgcccaccacgtccccacccgagccc
ccctacagcacacctccagccccctcctcctccggccgcctcactccatcccccagggga
gggcccttcaaccccagttcgggtggccccctcccgtcctcttcccccgcatcctttgat
ggaccctcccctcccgacacgcgtgtagggagccgtgagaaaagcctgtaccacagcgga
cccctgcctcccgcccaccaccacccgccccaccatcaccaccatcacgccccgcccccc
cagcctcaccaccaccacgcccacccccctcatcccccggagatggagacgggcggctcc
cccgacgaccccccaccccgactggctctggggccccagcccagcctgcgcggctggaga
ggcggcgggcccagccccaccccgggggccccgtccccgtcgcaccacggcagcgggggc
ggaggcatcagctcctcccaggccccagccctgcgctacttccagctgcccccccgggcg
gccagcgcggccatgtacgtgccagcccgctcgggccgcgggcgcaaggggcccctggtc
aagcagaccaaagtcgaaggtgagcctcagaagggaggcggcctccctgccgccgcctcg
cccacgtctccggcgtccccgcagcccccgcccgccgcggccgccccctcggaaaagaac
tccatcccaatccctaccatcatcatcaaggccccgtccaccagtagcagcggccgcagc
agccagggcagcagcaccgaggccgagcccccaacccagcccgaggctgcggggggcggc
ggcggcggcggcggcggcggcggcggcggcggcggcggtagcagcgcgggaggctcctct
gcgccgagccccgccccggccatgtcgccggtgccgccgtccccctcgcccgtgcccacc
cccacctcgcccagcggcccggccaccctggatttcaccagccagttcggggcggccctg
gtcggggcggcccggagggaagggggctggcagaacgaagcccgccggcggtccacgctc
ttcctctccaccgacgcgggggacgaggatggcggcgacagcgggctgggcccaggggcg
cccccgggtccccgactgcgccactcgaagtccatcgatgaaggcatgttctccgccgag
ccctatctgcggctggagtctgcgggcgcggggagtggcggtggctacggggcttacgcg
gccggcagccgcgcctacgggggcagtgggggcagcagcgccttcaccagcttcctgccg
ccccggcccctggtccacccgctgaccggcaaggccctggaccccgcctcccctctcgga
ctggccctggccgcccgagagcgggcgctgaaggagtcctcggagggtggtgggcccccc
cagccccctccaaggcccccatcgccccgctatgaggccccgccgcccaccccacaccac
cactcgccccacgcccaccatgagccggtgctgcgtctctggggagcctcaccgccggac
cccgcccgtcgggagctggggtaccgtgcagggctgggcagccaggagaagtcccttccg
gccagccctccagctgcccgacgctccttgctgcaccgcttgccccccacagctcccggg
gtcgggcccctcctcctgcagctggggccagagcccccgcccccgctccccggggtgaac
aaggcgtggaggtcgggagcccctgaggagcccgagcggctgcccctgcacgtgcggttc
cttgagaactgccagcccagagccagtggggcggggggaaggggacccccctcggaagac
gggccgggggttccaccgcccagcccgcgccgctccgtaccgccctcgccgacctccccg
cggggcactgaagagaacgggcttcccctgctagtcttgccgccccctgctccctcggtg
gatgtggaagatggcgaattcctctttgtggaaccgctgcctccgcctctggagttctcc
aacagcttcgagaaaccagagtcgcccctcacacccgggcccccccatccgctgccggac
ccacccaccccaaccaccccattgcccccagtgccaccacctgctgtcgccgctgcacct
cccaccctggactccacggcatccagcctgacttcctatgacagtgaggtggccacactg
acccagggggcccccgtggctcctggggacccccctccgccaggcccaccggccccggct
gcccctgctgccccggcgccacagcctggcccggacccaccgcccggcacagattcggga
atcgaggaggtagacagtcggagcagcagcgaccacccgctggagaccatcagcagcgcg
tccacactgagcagcctttctgcggaaggtggtggccctgcaggaggcggtggtggaggc
ggtggggccagtgtggccagtgggccagagcttctggacacatacgtggcctacctggac
ggccaggccttcggggggagtgggactcctggcccaccctatcccccacagctcatgact
ccttctaagctccggggccgggctctggggaccagtggaggcctgaggcctggccccagt
gggggactccgggaccctgtcactcccaccagccccactgtctctgtgacgggagctgga
acagacgggctgcttgccctgagtggttgcacgggaccctcgacggcgggtatggctggg
ggtccggtggcgatagagccggaaggcccaccagtgcccttgccatcagcctcctctttg
cctcggaagctgctaccctgggaggagggcccgggcccaccgccaccacccctgcccggg
cccctggcccagcctcaggcctcagccttggccacagtaaaagccagcatcatcagtgaa
ctcagctccaagcttcaacaatttgggggctcctcggcagctggtggcgctctgccctgg
gcccggggaggcagcgggggaagcggggacagtcaccacgggggatccagctacgtccct
gagaggacctcttccctgcagcggcagagactctctgaagactcccagtcctcgctcctc
tccaaacccgtcagcagcctgtttcagaactggcccaaaccacctctgccgccactcccc
acaggaagcggggtccccccttcagctgctgcagcgtcgggggccacctcaccctcagcc
tcctcctccacgtccacccgccacctccagggcgtggagttcgagatgcggcctcctctg
ctccgccgggcccccagcccctcactgctgcccgcctcggagcacaaggtcagccctgcg
cccaggccctcgtccctgcccatcctgccttccggacccctgtatccgggcctctttgac
atccgcagctccccaaccggaggggcaggaggttcagctgatccttttgcccctgtcttt
gtgccaccacaccctgggatgtctggggggcttggcggggccttgtcaggggcctcccgc
tccctctcaccaacccgcctgctttcgctgcccccggacaagcccttcggcgctaagcct
ctggggttctggaccaagttcgatgtggctgattggctcgagtggctggggttggctgag
caccgggcacagttcctggaccacgagatcgatggctcccatctgcctgccttgaccaag
gaggattacgtcgatctgggtgtgaccagggtgggccaccgcatgaacatcgaccgggct
ctcaaatttttcctggagaggtga
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