KEGG   Mustela lutreola (European mink): 131818624
Entry
131818624         CDS       T09578                                 
Symbol
SYMPK
Name
(RefSeq) symplekin isoform X1
  KO
K06100  symplekin
Organism
mlk  Mustela lutreola (European mink)
Pathway
mlk03015  mRNA surveillance pathway
mlk04530  Tight junction
Brite
KEGG Orthology (KO) [BR:mlk00001]
 09120 Genetic Information Processing
  09122 Translation
   03015 mRNA surveillance pathway
    131818624 (SYMPK)
 09140 Cellular Processes
  09144 Cellular community - eukaryotes
   04530 Tight junction
    131818624 (SYMPK)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlk03021]
    131818624 (SYMPK)
   03019 Messenger RNA biogenesis [BR:mlk03019]
    131818624 (SYMPK)
Transcription machinery [BR:mlk03021]
 Eukaryotic type
  RNA polymerase II system
   Other transcription-related factors
    Transcription termination factor
     131818624 (SYMPK)
Messenger RNA biogenesis [BR:mlk03019]
 Eukaryotic type
  mRNA processing factors
   3' end processing
    Cleavage stimulation factor (CSTF) complex
     131818624 (SYMPK)
    U7-dependent histone pre-mRNA processing factors
     131818624 (SYMPK)
SSDB
Motif
Pfam: Symplekin_C SYMPK_PTA1_N PDS5 Cnd1 Cohesin_HEAT
Other DBs
NCBI-GeneID: 131818624
NCBI-ProteinID: XP_059009235
LinkDB
Position
16:58032022..58069041
AA seq 1277 aa
MAGSSGDSVTRRSVASQFFTQEEGPGIDGMTTSERVVDLLNQAALITNDSKITVLKQVQE
LIINKDPTLLDNFLDEIIAFQADKSIEVRKFVIGFIEEACKRDIELLLKLIANLNMLLRD
ENVNVVKKAILTMTQLYKVALQWMVKSRVISELQEACWDMVSAMAADIILLLDSDNDGIR
THAIKFVEGLIVTLSPRMADSEVPRRQEHDISLDRIPRDHPYIQYNVLWEEGKAALEQLL
KFMVHPAISSINLTTALGSLANIARQRPMFMSEVIQAYETLHANLPPTLAKSQVSSVRKN
LKLHLLSVLKHPASLEFQAQITTLLVDLGTPQAEIARNMPSGKDARKRPRDDSDSTLKKM
KLEPNLGEDDEDKDLEPGPSGTSKASAQISGQSDTDITAEFLQPLLTPDNVANLVLISMV
YLPEAMPASFQAIYTPVESAGTEAQIKHLARLMATQMTAAGLGPGVEQTKQCKEEPKEEK
AVKPESVLIKRRLSAQGQAISVVGSLGAMSALEEEAPQAKRRPEPIIPVTQPRLAGAGGR
KKIFRLSDVLKPLTDAQVEAMKLGAVKRILRAEKAVACSGAAQVRIKILASLVTQFDSGL
KAEVLSFILEDVRARLDLAFAWLYQEYNAYLAAGASGALDKYEDCLIRLLSGLQEKPDQK
DGIFTKVVLEAPLITESALEVIRKYCEDESRTYLGMSTLRDLIFKRPSRQFQYLHVLLDL
SSHEKDKVRSQALLFIKRMYEKEQLREYVEKFALNYLQLLVHPNPPSVLFGADKDTEVAA
PWTEETVKQCLYLYLALLPQNHKLIHELAAVYTEAIADIKRTVLRVIEQPIRGMGMNSPE
LLLLVENCPKGAETLVTRCLHSLTDKVPPSPELVKRVRDLYHKRLPDVRFLIPVLNGLEK
KEVIQALPKLIKLNPIVVKEVFNRLLGTQHGEGNSALSPLNPGELLIALHNIDSVKCDMK
SIIKATNLCFAERNVYTSEVLAVVMQQLMEQSPLPMLLMRTVIQSLTMYPRLGGFVMNIL
SRLIMKQVWKYPKVWEGFIKCCQRTKPQSFQVILQLPPQQLGAVFDKCPELREPLLAHVR
SFTPHQQAHIPNSIMTILEASGKQEPEAKEVPAGPLEEDDLEPLALAPAPAPRPPQDLIG
LRLAQEKALKRQLEEEQKLKPGGVGALSSSSAAAAAAASSSTRPGPPQPEEAIDFREEGP
ECETPAIFISMDDDSGLTEAALLDSSLEGPLPKEAAGGLTSKEERSPQTLTPAGEDTMKT
PSPAAEESGEPEIKGNS
NT seq 3834 nt   +upstreamnt  +downstreamnt
atggcaggcagcagtggcgacagtgtcactaggcggagtgtggcatcacagttcttcaca
caagaggaggggccaggcatcgatggcatgaccacctcagagagagtggtggatctcctg
aaccaggcagcactaatcaccaatgattcaaagatcacagtactcaagcaggtccaagaa
ctgatcatcaacaaagatcctacactactagacaacttcctggatgagatcatcgctttc
caagcggacaagtcgatcgaagtgcgcaaatttgtcattggcttcatcgaggaggcatgc
aaacgagacattgagttactgctgaaactgattgcgaacctcaacatgctcttgagggac
gagaatgtgaatgtggtgaagaaggccatcctcaccatgacccagctctacaaggtggcc
ctgcagtggatggtaaagtcacgagtcatcagtgagctccaagaggcctgctgggacatg
gtgtctgccatggctgcggacatcattctgctgctggattctgacaatgacggcatccgc
acccacgccatcaagtttgtggagggtctcattgtcaccttgtcaccccgcatggctgac
tcggaggtgccccgacgccaggagcatgacatcagcttagaccgcatccctcgtgaccac
ccatatatccagtacaatgtgctgtgggaagaaggcaaggcagccttggagcagctgctc
aagttcatggtgcaccccgccatctcctccatcaacctgaccacagcgctgggctccctt
gccaacatcgcccgccagaggcccatgttcatgtcagaggtgatccaggcctatgaaacc
ctgcatgccaacctgcccccgacgctggctaaatctcaggtgagcagtgtgcgcaagaac
ctcaagctgcacctgctgagtgtcctgaagcacccagcctccctggagtttcaggcccag
atcaccaccctgctagtggacctgggcacgccccaggccgagatcgcccgcaacatgccc
agcggcaaggacgcccgcaagcggccccgagacgactctgattccacgctcaagaagatg
aagctggagcccaacctgggggaagatgatgaggacaaggacttggagccaggcccgtca
ggaacctctaaggcctcagcccaaatctcaggccagtcagacacagacatcacagctgag
ttcctgcagcccttgctgacacctgacaatgtggccaatctggtcctcatcagcatggtg
tatctgcctgaggccatgcccgcctctttccaagccatctataccccagtggagtcagca
ggcactgaagcccagatcaagcacctggctcggctcatggccacacagatgacggctgca
ggactagggccaggtgtggagcagaccaaacagtgcaaggaggagcccaaggaggagaag
gcagtgaagccagagagcgtcctgatcaagcggcgtctgtcggcccagggccaggccatc
tcggtggtgggctccttgggcgccatgtctgctctagaggaggaggcgccccaggccaag
aggaggccggagcccatcatccctgtcacacagccccggctggctggcgctggtggccgc
aagaaaatcttccgcctgagcgatgtgctgaagcccctgacagatgcccaggtggaggct
atgaagctgggcgctgtgaagaggatcttacgggcggagaaggctgtggcctgcagcggg
gcggcccaggtgcgcataaagatcctagccagtctcgtgacgcagtttgattcgggcctg
aaggctgaggtcctgtccttcattctggaggatgtgcgggcccgcctggacttggccttc
gcctggctctatcaggagtacaacgcctacctggcagccggtgcctcgggcgccctggac
aagtatgaggactgcctcatccgcctgctctccggcctgcaggagaagccagaccaaaag
gatgggatcttcactaaagttgtgctggaggcgccactgatcacggagagcgctctggag
gtgattcgcaagtactgcgaggacgagagtcgtacatacctgggcatgtccactcttcga
gacctgatcttcaaacggccgtcccgccagttccagtacctgcatgttctgctagacctc
agctcccacgagaaggacaaggtgcgctcccaggccctgctgttcatcaagcgcatgtat
gagaaggaacagctgcgagagtatgtggagaaatttgccctcaactacctgcagctcctg
gtccaccccaacccgccgtccgtgttatttggagccgacaaggatacagaggtggcggcg
ccttggaccgaggagaccgtaaagcagtgtctgtacctctacctggctctcctgcctcag
aaccacaagctcatccacgaactggcggccgtgtacacggaggccatcgccgacatcaag
cggacagtgctgagggtcatcgagcagccgatccgaggaatgggcatgaactcaccagag
ctgctcctgctggtagaaaactgtcccaagggggcagagacactggtcacacgatgtctg
cacagcctcacggacaaagtcccgccctccccagagctggtgaagcgggttcgggatctc
taccacaagcggttgccagatgtccgcttcctcatccctgtgctcaacggactagagaag
aaagaagtgatccaggccctgccaaagctcatcaaactcaaccccattgtggtgaaagag
gtcttcaaccgcctgctgggcacccagcatggtgaagggaactcggccttgtccccactg
aaccctggagagctgctgatcgcactgcacaacatcgactcggtgaagtgtgacatgaag
tccattatcaaagccaccaacctgtgctttgcggaacggaacgtgtacacatcggaggtg
ctggccgtggtgatgcagcagctgatggagcagagccccctgcccatgctgctcatgagg
accgtcatccagtctctgaccatgtacccccgcctggggggcttcgtcatgaacatcctg
tcccgcctcatcatgaagcaggtgtggaagtatcccaaggtgtgggagggcttcatcaag
tgctgtcaacgcaccaagccccagagtttccaggtcatcctgcagttgccaccccagcag
ctgggtgccgtctttgacaagtgcccagagctccgggaacccctgctggcccacgtccga
tccttcaccccccaccagcaagcacacatccccaactccatcatgaccatcctggaggcc
agtggcaagcaggagccagaggccaaggaagtgcctgcagggcccctggaagaggacgac
ctggagcccttggccctggccccggcccctgccccccggccccctcaggacctcattggc
ctgcggctggcccaggagaaagccttaaagcgtcagctggaggaggaacagaagctgaag
ccgggaggagtgggagccctctcgtcgtcgtcggcggcggcggcggcggcggcctcttcc
tccacccggccaggccctccccagcccgaagaagccatagatttccgggaggaggggcct
gagtgtgagaccccggccatcttcatcagcatggatgacgactcggggttgaccgaggcc
gcactcctggactctagtcttgaggggcccctacctaaggaggcagcgggcgggttgacc
tcaaaggaggagcgcagtccccagaccctcacccctgccggagaagacaccatgaagacc
cccagccctgccgccgaggaatccggggaacccgagatcaaggggaacagctga

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