Mustela lutreola (European mink): 131819974
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Entry
131819974 CDS
T09578
Symbol
PALB2
Name
(RefSeq) partner and localizer of BRCA2 isoform X1
KO
K10897
partner and localizer of BRCA2
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03440
Homologous recombination
mlk03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
131819974 (PALB2)
03460 Fanconi anemia pathway
131819974 (PALB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mlk03400
]
131819974 (PALB2)
DNA repair and recombination proteins [BR:
mlk03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA complex
131819974 (PALB2)
FA (Fanconi anemia) pathway
Downstream FA components
131819974 (PALB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALB2_WD40
Motif
Other DBs
NCBI-GeneID:
131819974
NCBI-ProteinID:
XP_059011408
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Position
17:complement(5596667..5623097)
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AA seq
1120 aa
AA seq
DB search
MEEPPGKPLSCEEKEKLKEKLAFLKREYSKTLARLQRAQKAEKVKNSVKKTVEEHDCLLQ
QEISPQPNHSEHKNKISPYDTLQINTHLDEETGEKTPITLDVEPESFNPGHGPVEELHIQ
RTGDIQEHFPYQVSGSGAEKRQSKLPGRRKKQQKRTYTAQARESFFDADSFLLSEKRLKK
QEEINRENPRTPVNERTCPLGSTSDIPSSREPMTETNIRGILSPPTAKPQRGVSALIGGN
NFSRVPTVASFTLSNSSSGQHLEHKPPKGDCELTTHNIKNINPASPVKVEAQGRSMTVST
DNSEVNKAVSGSGQLPRSPELEANNSYSVKELTYDNLPANENQNLKGQNHTEESLPSPHN
TLEGRNESLQEKEVLSQSTSLSPEVISPASAEGQTHSCTMVEGLLFPAEYYVRTTRRMSS
CQRKVALQAVIQSHLGVRKKGFKNKSTEETKNLNLCSEETDQSELRTSGIRTRQLSSRRP
EKCLLLTEVNSPTGPTEANLPRKAVTQPSGRRHGGKRKTVSPPVLDHHQRLLPTPGTAGV
HRSKEEVTLHEDPDEKAIHHGKKKIKGKDNRCPKEDSLSSRNNAYLALDSAAFTVSFQEN
ELLSLKELSSFLKTTDFQLPDEVFGPLKLEKLKSCSEKPEKVEPFVSNMYGQKHLKEGNC
SVLEDLSPKQINIEMEDLEEEIIVLPGKAQAKTSDLTSWSQKKGLSSSVLLFTPLNTGAP
EDNNRPTAEMCSPTFPILGTTPAFGSQAHYEKVCSEVGPTCSKPQLPHLKDSDWKQCDGW
ASPSKSDGSLVVPGRGQPSCDCDSGPRATPLPTGSVTLKDNQLCGNPHPESRKQTDVADL
PACNSLNPGHLQLVSKLKNPSGSCSVDVSATWWEIAGFKEPCIITACEYVVSLWKPLDTW
QWEKLYSWQFTEVPVLQIVPVPDVCNLVCVALGNLEIREIRALLCSSDGKREKQVLLSSG
NIKAVLGLTERRLVSSSGNLCDQQVEIMTFAEDGGSKEKRFLMSPEETVLTFAEVHGMQE
ALLGTTIMNNIVIWNLKTGQLLKKMHIGDSYQASVCHKAYSEMGLLFLVLSHPCAKENEP
LGSPVFQLIVINPKTSLSVGVMLYCLPQGHAGRQVCAPAH
NT seq
3363 nt
NT seq
+upstream
nt +downstream
nt
atggaagagcctcccgggaagccactcagctgtgaggagaaggaaaagttgaaggaaaaa
ttagcattcttgaaaagggaatacagcaagacactggcccgccttcagcgtgcccaaaaa
gctgagaaggttaagaattctgtaaagaaaacagtggaagaacatgattgcttgctccag
caggaaatttcaccacagccgaaccactcagaacataaaaataaaatatctccttatgac
acgttacaaatcaacacccatctggatgaagaaactggagaaaagacacctatcacactt
gacgttgaacctgagtccttcaaccctggacatggccctgtggaggaactacatatacaa
agaacaggtgatatccaggaacattttccctaccaggtcagtggctctggtgctgagaaa
aggcagagtaagctgccagggagaagaaaaaagcagcagaagagaacatatactgcacag
gcaagagaatctttctttgacgcggattcattcctactctctgagaaaagactaaagaaa
caggaggaaatcaatagagaaaatcctaggacacctgtaaatgaaagaacttgtccttta
ggttctacgtctgacattcctagttctcgagaaccaatgacagagactaacattaggggt
atattaagtccaccaactgccaaaccacaaagaggtgtcagtgctctaataggaggaaat
aatttctccagggttcctacggttgcttcatttactctgtcaaatagcagtagtggtcag
caccttgaacataagcctcctaaaggtgactgtgaactcactactcacaatataaaaaac
attaaccctgcttcacctgtaaaggtagaggcacaaggcagaagcatgacggtctctaca
gataactcagaggtaaacaaagctgtaagtggaagtggccagctgcccagaagtcctgag
ttagaggcaaataattcatactctgtaaaagaactcacttatgataacttaccagcaaat
gaaaaccaaaatttaaaaggacagaatcacacagaggagtctttaccatctccccataac
actcttgaaggtagaaatgaaagtcttcaggaaaaggaggttttaagtcaatctacgagt
cttagcccagaagtaatctcccctgcttctgcagaaggtcaaacacattcttgtacaatg
gttgaaggccttctgtttcccgcagagtattatgttagaacgacacgacgcatgtcaagc
tgccagaggaaagtagcgctgcaggctgtcattcagagtcatttgggtgtcagaaagaaa
ggttttaaaaataaaagtacggaggaaacaaaaaatttaaacctttgcagtgaagaaact
gaccagagtgaacttaggacatctggcatacgtacaagacaactaagttcaagaagacct
gagaagtgtctcttgttaacagaggtcaactctcccactgggcctactgaagctaacctt
cccaggaaggcagttacccagccatctggtagaagacacggaggaaaaagaaagacagtc
tccccacctgtattagatcatcatcaacgacttttgccaactcctggcacagcaggtgtt
catagatccaaggaagaagtcaccttacatgaagatccggatgaaaaagcaattcatcat
ggtaagaagaaaattaaagggaaggacaatcgttgtccaaaagaggactccctttcttcc
agaaataatgcttatctagctttggattctgctgcgttcacggtttcgtttcaggagaat
gaactgctaagtttaaaggaactgtcatcttttctcaaaaccacagactttcagttaccc
gatgaagtctttggacctcttaaacttgaaaaactgaagtcctgttcagaaaaaccagaa
aaagttgagccttttgtatcaaacatgtatggacagaaacaccttaaggagggaaactgt
agtgttttagaagacctgagtcctaaacaaatcaatattgaaatggaggacttggaagag
gaaattattgttctcccgggaaaagcacaagctaaaacatcagacctaacaagctggtct
cagaagaagggcctttcttcatctgtattactttttacacctttaaatactggtgccccc
gaggataataacaggcccacagcagagatgtgctcacccactttccccatcttaggcact
actccagcttttggctcccaagcacactatgaaaaagtgtgttcagaggttgggccaact
tgctctaaaccccaacttcctcacttaaaagacagtgattggaaacaatgcgacggttgg
gccagcccatcaaaatcagatggcagcctggttgtgccaggtagaggacagccttcctgt
gactgtgattctggtccccgggcaacccctcttcccaccgggtcagtcactctcaaagac
aatcaactgtgtggaaatccacacccagagtcaaggaaacagactgatgtagcagacctt
cctgcttgtaatagcttaaacccaggccaccttcagttggtttcaaagttaaagaatcct
tccggttcctgctcggtggatgtgagtgccacatggtgggaaatagcaggtttcaaggag
ccgtgtatcataactgcctgtgaatacgtggtttctctttggaaaccacttgatacttgg
cagtgggaaaaactttattcctggcaattcacagaggttccagtattacagatagttcca
gtgcctgatgtttgtaatctcgtgtgtgtggctttgggaaatttggaaatcagagaaatc
agggcattactttgttcctctgatggtaaacgtgaaaagcaagtattactgagttctgga
aatataaaagctgtgcttggcctgacagagaggaggctagtcagtagcagtgggaacctt
tgtgaccagcaagtagaaatcatgacatttgcagaagatggaggaagcaaagaaaaaaga
tttttgatgtcccctgaagagactgtactaacttttgctgaggtccacgggatgcaggaa
gctctgcttggtaccacaataatgaacaacattgttatttggaatttaaaaactggtcag
ctcctgaaaaagatgcacattggtgattcctaccaagcttcagtctgtcacaaagcctat
tctgaaatggggctcctgttccttgttctgagccacccttgtgccaaggagaatgagccg
ctgggaagccccgtgtttcagctgatcgtgattaaccctaagacaagcctgagtgtgggt
gtgatgctctactgtcttcctcaagggcacgctggaaggcaagtgtgtgctcctgctcac
tga
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