Mustela lutreola (European mink): 131820789
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Entry
131820789 CDS
T09578
Symbol
COL4A6
Name
(RefSeq) collagen alpha-6(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04151
PI3K-Akt signaling pathway
mlk04382
Cornified envelope formation
mlk04510
Focal adhesion
mlk04512
ECM-receptor interaction
mlk04518
Integrin signaling
mlk04820
Cytoskeleton in muscle cells
mlk04926
Relaxin signaling pathway
mlk04933
AGE-RAGE signaling pathway in diabetic complications
mlk04974
Protein digestion and absorption
mlk05146
Amoebiasis
mlk05165
Human papillomavirus infection
mlk05200
Pathways in cancer
mlk05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
131820789 (COL4A6)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131820789 (COL4A6)
04518 Integrin signaling
131820789 (COL4A6)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131820789 (COL4A6)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131820789 (COL4A6)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
131820789 (COL4A6)
09154 Digestive system
04974 Protein digestion and absorption
131820789 (COL4A6)
09158 Development and regeneration
04382 Cornified envelope formation
131820789 (COL4A6)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
131820789 (COL4A6)
09162 Cancer: specific types
05222 Small cell lung cancer
131820789 (COL4A6)
09172 Infectious disease: viral
05165 Human papillomavirus infection
131820789 (COL4A6)
09174 Infectious disease: parasitic
05146 Amoebiasis
131820789 (COL4A6)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
131820789 (COL4A6)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlk04147
]
131820789 (COL4A6)
00536 Glycosaminoglycan binding proteins [BR:
mlk00536
]
131820789 (COL4A6)
Exosome [BR:
mlk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
131820789 (COL4A6)
Glycosaminoglycan binding proteins [BR:
mlk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131820789 (COL4A6)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
131820789
NCBI-ProteinID:
XP_059012513
LinkDB
All DBs
Position
X:complement(92981739..93251378)
Genome browser
AA seq
1706 aa
AA seq
DB search
MHTGLWLLLVTLCLTEELVGAGEKKSYGKPCGGQDCSGGCICFPEKGSRGRPGPIGIQGP
AGPQGFAGPSGLAGLKGERGSPGPLGPYGPKGDKGPMGVPGFLGINGIPGHPGQPGPRGP
PGLDGCNGTQGAVGYPGPQGYPGLLGPPGLPGQKGSKGEPVFDQGTFKGMKGEPGLPGLD
GITGPPGTPGSPGAVGPMGPPGLQGPPGPPGFPGPDGNMGLGFQGEKGVKGDVGLPGPAG
PPPSTGELEFMGFPKGKKGSKGEPGLPGFPGASGPPGLPGFGTAGEKGEKGIPGLPGLRG
PMGLEGFQGPPGSQGKKGASGFPGLNGFPGMKGEKGAIGLPGPDVFIDTDGAVISGYPGD
PGMPGLPGLKGDEGIQGQPGPSGVPGLPALPGIPGALGPQGVPGVKGDQGNRGRTTVGTA
GPPGRDGLPGLPGLPGPPGPTFETGTLQNAEPGFPGLRGEQGPKGNPGLKGMKGDLGFCA
CDGGIPNTGPPGDPGLPGPPGLIGLPGIKGIRGDPGSGGAQGPSGTPGLFGPRGPVGPKG
EKGEPTLSSGSGLPGEQGDPGPQGLPGETGAPGKDGIPGLPGLPGLPGDDGQGFPGEKGF
PGLPGEKGHSGPTGPPGIGLPGSPGPRGLPGDQGINGLPGQQGLPGLPGDCCCRESIGKG
DLVTEGGITLPCIIPGSYGPSGLPGVPGFPGPKGARGLPGTPGQPGLHGNKGEPGSPGLV
HLPELPGFPGPRGEKGLPGFPGLPGKDGLPGKLGSPGLPGSKGAPGDIFGAEDGAPGEQG
LQGLPGDKGFPGDSGLLGPKGLLGKSGLLGPKGERGSPGMPGHVGQPGPPGPQGLFGVKG
KPGLPGAPGFPGPSGHPGKKGVRGESGPPSSAGKRGLPGLKGFPGSPGLVGFLGSSGSPG
NTGLPGLPGLKGEKGSAGLAGFPGMPGLPGIPGASGLKGISGSAGKVGPSGRAGSAGKKG
DRGDPGPVGIPSPRPPMLNLWFKGDKGSRGSAGSNGFPGPRGDKGEAGLPGPPGLPGAPG
FPSTIKGLIGRAGIPGSPGQRGLPGLKGSPGITGFPGIPGESGSQGLRGAPGLPGTFGLP
GSKGDQGQTFGISGSPGPKGQPGESGFKGMKGTDGIMGDVGFPGSKGEDGNVGISGDVGL
PGSSGLPGTAGMRGNPGFPGSPGHPGAPGPLGPSGLMGTKGFPGLPGLHGLNGLPGTKGT
HGNPGPSITGVPGPAGLPGPKGERGSPGTGLGAPGKPGMKGQKGGRGFPGLQGPAGLPGA
PGLSLPSVIVGQPGDPGRPGLDGERGRPGSPGPPGPPGPSSDQGDPGDPGFPGVPGPQGP
TGDQGIPGFSGLPGELGLKGMRGEPGFMGIPGKVGPPGDPGLPGMKGKLGPRGFSGPRGA
PGQKPVTEAVQVPPGPMGLPGIDGISGLMGDPGVQGPVGLQGSKGLPGIPGKDGLNGLPG
PPGALGDPGLPGLQGPPGFEGAPGKKGPFGRAGVPGQSVRVGYTLVKHSQSEQVPLCPVG
MSQLWVGYSLLFVEGQEKAHNQDLGFAGSCLPRFSTMPFIYCNMDEVCHYAGRNDKSYWL
STTAPIPMMPVGQAQIPQYISRCSVCEAPSQAIAVHSQDVTIPRCPLGWRSLWIGYSFLM
HTAAGAEGGGQSLVSPGSCLEDFRATPFIECSGARGTCHYFANKYSFWLTTVEERQQFRE
EPVSETLKAGQLHTRVSRCQVCMKSL
NT seq
5121 nt
NT seq
+upstream
nt +downstream
nt
atgcacactgggttgtggctgctcctggttacgttgtgcctgactgaggaactggtagga
gctggagagaagaagtcctatggaaagccatgtgggggccaagactgcagcggtggctgt
atatgctttcctgagaaaggatccagagggcgaccaggaccaattggaattcagggtcca
gcgggccctcaaggatttgctggccctagtggtttagcagggttgaaaggagaaaggggt
tccccaggccccctgggaccatatggaccaaaaggagataagggtcccatgggagttcct
ggctttctcggcatcaatgggattccaggccaccctggacagccagggcccaggggccca
cctggcctggatggctgtaatggcactcaaggagctgttggatatccaggccctcagggc
tatcctgggcttctcggaccacccgggcttcctgggcagaaaggctctaaaggcgaacct
gtctttgaccaaggtactttcaaaggaatgaagggggagcctgggctgcctggactggat
ggaatcactggtccaccaggcacacctggttccccaggagctgtaggacccatgggacca
ccaggattgcaaggtcctccaggccccccaggcttccctggtcctgatgggaatatgggg
ttaggtttccaaggagagaaaggagtcaagggggatgttggtctcccaggccctgcagga
ccgccaccatctactggggagctggaatttatgggatttcccaaagggaaaaaaggatcc
aagggtgaaccagggcttccaggtttcccaggagcaagtggccctccgggtctcccagga
tttggaactgctggagaaaaaggagaaaagggaatccctggcttgccaggacttaggggt
cccatgggtttggaaggattccaaggccctccaggcagtcagggcaagaagggggcttca
ggtttccctgggcttaatggattcccaggaatgaagggtgaaaagggtgccattggcttg
ccaggcccagatgttttcatcgatacagatggtgctgtgatctcaggttatcctggagac
cccggtatgccaggcctcccaggacttaaaggagatgaaggcatccagggccaacctggc
ccttctggtgtccccggcttaccggctttaccaggtatcccaggtgccctagggccccaa
ggagttccaggtgtgaagggggaccaaggaaaccgaggccgcaccacagttgggacagct
ggcccccctggcagagatggtttgccaggcctgcccggcctaccgggcccacctggtccc
acatttgagactggaaccctacaaaatgcagagccaggcttccctggtctccgaggagaa
caaggtccaaaaggaaacccaggcctcaaaggaatgaaaggggacttgggcttctgtgcc
tgtgatggtggtatccctaacactggaccacctggggatccaggcctgcctgggccccct
ggcctcataggccttccaggcattaaaggaatccgaggagatccaggctctgggggtgca
cagggcccatcagggactccaggtttatttgggcctcgcggtcctgtgggccccaaagga
gagaaaggagaaccgactctcagttcaggatcagggttgccgggggagcagggtgaccct
ggcccccaggggctccctggggagaccggagccccaggcaaggatggaatacccggcttg
ccaggtctgccaggcctcccgggtgacgatggacagggcttcccaggtgaaaagggcttc
ccaggacttcctggtgaaaagggccacagtggtccaactgggcccccaggaattgggcta
cctggatctcctggacctcgagggcttcctggagatcaaggaatcaatggattaccaggt
caacaaggcctccctggacttcccggtgactgctgctgcagggagagcattggtaaagga
gacttagtcacagagggagggatcaccttgccatgtataattcctgggtcctatggtcca
tcaggcttaccaggagttcccggattcccaggccctaaaggggcccgtggcctccctggg
accccaggccagcccggactgcatgggaataaaggagagcctggaagtccaggattggtt
caccttcctgaattgccaggatttcctggacctcgtggggagaagggcttgcctgggttt
cctgggctccctggaaaagatggcttgcccgggaaacttggcagtccaggtttacccggt
tccaagggagcacccggtgacatctttggcgctgaggacggtgctccaggagagcaaggc
ctccagggattgccaggggacaaaggatttcctggagactctggccttctgggacccaag
ggtttgcttgggaagtcaggcctgctaggccccaaaggtgagcggggcagccccggcatg
ccgggccacgtgggacagccagggcccccagggcctcagggtctgtttggcgtcaagggc
aaacccgggctcccaggtgcaccaggctttcccggcccttcaggacatcctggaaagaaa
ggtgtaagaggcgagtcaggtcccccttcatcggctggaaagagaggcctgccagggctg
aaaggctttccaggatctccagggctggttggcttcttggggagctcaggctcgccaggg
aacactgggttgccaggcctgccaggtctgaagggtgagaaggggtctgccgggctggct
ggctttcctgggatgcctggtctccctggtattcctggcgcaagtggattaaagggaatt
tctggctccgccggaaaagtgggaccatctggacgggctggtagtgctggtaaaaaagga
gaccgaggcgacccggggccagttggaatacccagcccaagacctcccatgctgaacctc
tggttcaaaggagacaaaggctcgagaggctcagctggatccaacggatttcctgggccc
agaggtgacaaaggagaggctggcctcccgggaccaccaggcttgcctggagctcctggc
ttccctagtaccatcaagggacttattgggagagctggaatccctggctcccccggacag
cggggcttacctggcttaaaggggtcccctggaatcacaggttttccaggaataccaggg
gaaagcggttcacagggccttcgtggagctcccggactcccaggaacatttggtctccca
ggttcaaaaggagatcaaggtcagacatttggaatttccggtagcccaggacccaaggga
caacctggggagtctggttttaaaggcatgaaaggaacagatggcatcatgggtgatgtg
ggtttcccaggaagcaaaggtgaagatgggaatgttgggatttctggagatgttggcctt
cctggatcttcagggctccccgggactgcaggcatgagaggaaatccagggtttccgggt
tctccaggccatccaggggcacctgggcccctaggaccctctggcctaatgggaaccaaa
ggtttccctggacttcctggtttacatggactgaatgggcttccaggaaccaagggaacc
catggaaatccaggacctagtataaccggcgtgcctgggccagctggcctgcctggtccc
aaaggggaaagaggttctccaggaactggcctcggagccccagggaagccaggaatgaaa
ggacaaaaaggtggccgaggtttcccaggtctccagggtcctgctggtctgcctggtgcc
ccaggcctctccttgccctcagtcatagtgggacagcctggcgaccctgggcgaccaggc
ctagatggagagcgaggccgccccggctccccggggcccccagggccccctgggccatcc
tctgatcaaggtgaccctggagaccctggcttccctggagttcctggccctcaagggccc
acaggagaccaaggaattccaggtttctccggcctccctggagagctaggactgaaaggc
atgagaggtgagcctggcttcatggggattccaggcaaagttgggccacctggagaccca
ggacttcctggaatgaaggggaagttggggcccagaggcttttctggaccccgcggtgct
cctggacaaaaaccagttacagaagcagttcaggttcctcctggacccatgggtctacca
ggcatcgatggcatctctggcctcatgggagaccctggggttcaaggccctgtaggcctc
caaggctccaaaggtttacctggcatccctggcaaagatggcctcaacggactccccggc
ccgcctggggctctcggtgaccctggtcttcctggactgcaaggccctccaggatttgaa
ggcgctccagggaagaagggtcccttcgggagggctggagtgcctgggcagagcgtgaga
gtggggtacaccttggtgaagcacagccagtcggaacaggtgcccctgtgccctgtcggg
atgagccagctgtgggtaggttacagcttgctgttcgtggagggacaggagaaagcccac
aaccaggacctgggctttgctggctcctgcctgccccgcttcagcaccatgcccttcatc
tactgcaacatggacgaagtgtgccactacgccgggcgtaatgacaaatcctactggctc
tccaccaccgcccccattcccatgatgcctgtgggccaggcccagatcccccagtacatc
agccgctgctctgtgtgcgaggcaccttcacaggccatcgctgtgcacagccaggatgtc
accatcccgcggtgccccctgggctggcgcagcctctggatcgggtactccttcctcatg
cataccgcggcaggcgccgagggtggcggccagtccctggtctccccgggctcctgcctg
gaggatttccgagccactcctttcatcgagtgcagcggggcccggggcacatgccactac
tttgccaacaagtacagtttctggctgacgacggtggaagagaggcagcagtttagggag
gaaccggtgtccgaaacactgaaggccgggcagctccacacccgcgtcagccgctgccag
gtgtgtatgaaaagcctgtag
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integrated database retrieval system
