KEGG   Mustela lutreola (European mink): 131822152
Entry
131822152         CDS       T09578                                 
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
  KO
K12879  THO complex subunit 2
Organism
mlk  Mustela lutreola (European mink)
Pathway
mlk03013  Nucleocytoplasmic transport
mlk03040  Spliceosome
Brite
KEGG Orthology (KO) [BR:mlk00001]
 09120 Genetic Information Processing
  09121 Transcription
   03040 Spliceosome
    131822152 (THOC2)
  09122 Translation
   03013 Nucleocytoplasmic transport
    131822152 (THOC2)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:mlk03019]
    131822152 (THOC2)
   03041 Spliceosome [BR:mlk03041]
    131822152 (THOC2)
Messenger RNA biogenesis [BR:mlk03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Transport factors
    TREX complex
     131822152 (THOC2)
Spliceosome [BR:mlk03041]
 Complex C
  Other components
   EJC/TREX
    131822152 (THOC2)
 Other splicing related proteins
  Spliceosome associated proteins (SAPs)
   TREX complex
    131822152 (THOC2)
SSDB
Motif
Pfam: Tho2 THOC2_N Thoc2
Other DBs
NCBI-GeneID: 131822152
NCBI-ProteinID: XP_059014534
LinkDB
Position
X:complement(106044276..106157544)
AA seq 1629 aa
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSNNG
NSSSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSIQEKEREKEPSRERDIAKEMKSK
ENVKGGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKLVYFQVTAILP
KVPLGSENYASSPVISIHFLQDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSR
ERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRRKEENGTMGVSKHKSESPCESPYPN
EKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKK
HHKSSDKHR
NT seq 4890 nt   +upstreamnt  +downstreamnt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttgtgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaggctctttatgagttatcttaccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagcgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttatcaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagagtcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcttctttatacagagttgctgcagtacttctacagtttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcaaattgttagaaaacttacgatggtagtattgtcttct
gaaaaaattgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagccg
cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggttcacctgttaatgctttgcaaaataagagggcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtctttaatatgttctgttaccttggtcct
cacctttcacatgatcccattttatttgcaaaagtggtgcgcataggcaaatcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtacttcttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactgtggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccaatggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gttaagccttccggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatcttgtcacaaatacagaagtatgataatttaataacacct
gtagtagattcattgaaatacctcacttcattgaattatgatgttttggcctattgtatc
attgaagctttagctaatccggaaaaggagagaatgaaacatgatgacacaaccatctca
agttggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatattgaaagaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacg
atggagcaactagaagccatgactggtggagagcaattaaaagctgagggtggttatttt
ggccagataagaaacactaaaaaatcctcccagagattaaaggatgcactattggaccat
gatcttgctcttcctctctgtttgcttatggctcagcagaggaatggagtaattttccaa
gaaggtggagagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgatacc
ttggtacagttcggtgggtttttagcatctaatctaagcacagaagattatataaagcga
gtgccttcgattgatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccatatttcgtctaaatatgatgaacttaaaaagtca
gaaaagggaagtaaacaacaacataaagttcataagtacattacatcatgtgaaatggtg
atggcgcctgtccatgaagcagtggtctccttacatgtttccaaagtctgggatgacatc
agccctcagttctatgccacattctggtcattgacaatgtacgaccttgcagttccacac
accagctatgaacgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaagagaaagagcgttgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctacagagactg
aaactggaaaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgatataatttatacagttgcaagctgtaccgaaaatgaagct
agtcgatatgggagatttctttgctgcatgttagagactgtgaccaggtggcatagtgac
agagccacgtatgaaaaggaatgtggaaattatccaggattcctaactatattgcgggcc
actggatttgatggtggaaataaagctgaccagttagactatgaaaattttcgacatgtt
gtacataaatggcattacaaactaaccaaggcatccgtacattgccttgaaacaggcgaa
tatactcacatcaggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatttgggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacaaaatgggcctggtggtgggccttcttcatcgtcgataggaagtgca
tctaagtcggatgaaagcagtactgaggagactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccgaaaggaaattcaaacaatgga
aacagtagctctaacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggt
aaagatggtaaagaaaaaccgaaggaagagcggccaaacaaagatgaaaaagcaagagag
acgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaaaaccactgtccccaatgtagaatcaaaatcgattcaagaa
aaggaaagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaag
gaaaatgttaaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccc
cgatcagatgttgcagagcctgaaagggaacaaaaacgccgcaaaattgatacccaccct
tctccatcacattcctcaacagtaaagctggtttatttccaggttacagccatacttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttcta
caggacagtctcatcgaactcaaggagtcttcagcaaagctctacattaatcatactcct
ccaccactgtccaagagtaaggagagagaaatggacaagaaagacttggacaagtcgagg
gaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaacggaaaagggat
cattcaaacaatgaccgggaagtgccgccggacttagccaagaggcgaaaagaggaaaat
ggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaaataagtcaaagtcttcaggcaaagaaaaaggtggcgattct
tttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggagtccaggcatgat
aaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaagagaagaaa
catcataagtcctcggacaagcacagataa

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