Mustela lutreola (European mink): 131822152
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Entry
131822152 CDS
T09578
Symbol
THOC2
Name
(RefSeq) THO complex subunit 2 isoform X1
KO
K12879
THO complex subunit 2
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03013
Nucleocytoplasmic transport
mlk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131822152 (THOC2)
09122 Translation
03013 Nucleocytoplasmic transport
131822152 (THOC2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131822152 (THOC2)
03041 Spliceosome [BR:
mlk03041
]
131822152 (THOC2)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
TREX complex
131822152 (THOC2)
Spliceosome [BR:
mlk03041
]
Complex C
Other components
EJC/TREX
131822152 (THOC2)
Other splicing related proteins
Spliceosome associated proteins (SAPs)
TREX complex
131822152 (THOC2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Tho2
THOC2_N
Thoc2
Motif
Other DBs
NCBI-GeneID:
131822152
NCBI-ProteinID:
XP_059014534
LinkDB
All DBs
Position
X:complement(106044276..106157544)
Genome browser
AA seq
1629 aa
AA seq
DB search
MAAATVVVPVEWIKNWEKSGRGEFLHLCRILSENKSHDSSTYRDFQQALYELSYHVIKGN
LKHEQASNVLNDISEFREDMPSILADVFCILDIETNCLEEKSKRDYFTQLVLACLYLVSD
TVLKERLDPETLESLGLIKQSQQFNQKSVKIKTKLFYKQQKFNLLREENEGYAKLIAELG
QDLSGNITSDLILENIKSLIGCFNLDPNRVLDVILEVFECRPEHDDFFISLLESYMSMCE
PQTLCHILGFKFKFYQEPNGETPSSLYRVAAVLLQFNLIDLDDLYVHLLPADNCIMDEHK
REIVEAKQIVRKLTMVVLSSEKIDEREKEKEKEEEKVEKPPDNQKLGLLEALLKIGDWQH
AQNIMDQMPPYYAASHKLIALAICKLIHITIEPLYRRVGVPKGAKGSPVNALQNKRAPKQ
AESFEDLRRDVFNMFCYLGPHLSHDPILFAKVVRIGKSFMKEFQSDGSKQEDKEKTEVIL
SCLLSITDQVLLPSLSLMDCNACMSEELWGMFKTFPYQHRYRLYGQWKNETYNSHPLLVK
VKAQTIDRAKYIMKRLTKENVKPSGRQIGKLSHSNPTILFDYVCFEILSQIQKYDNLITP
VVDSLKYLTSLNYDVLAYCIIEALANPEKERMKHDDTTISSWLQSLASFCGAVFRKYPID
LAGLLQYVANQLKAGKSFDLLILKEVVQKMAGIEITEEMTMEQLEAMTGGEQLKAEGGYF
GQIRNTKKSSQRLKDALLDHDLALPLCLLMAQQRNGVIFQEGGEKHLKLVGKLYDQCHDT
LVQFGGFLASNLSTEDYIKRVPSIDVLCNEFHTPHDAAFFLSRPMYAHHISSKYDELKKS
EKGSKQQHKVHKYITSCEMVMAPVHEAVVSLHVSKVWDDISPQFYATFWSLTMYDLAVPH
TSYEREVNKLKVQMKAIDDNQEMPPNKKKKEKERCTALQDKLLEEEKKQMEHVQRVLQRL
KLEKDNWLLAKSTKNETITKFLQLCIFPRCIFSAIDAVYCARFVELVHQQKTPNFSTLLC
YDRVFSDIIYTVASCTENEASRYGRFLCCMLETVTRWHSDRATYEKECGNYPGFLTILRA
TGFDGGNKADQLDYENFRHVVHKWHYKLTKASVHCLETGEYTHIRNILIVLTKILPWYPK
VLNLGQALERRVHKICQEEKEKRPDLYALAMGYSGQLKSRKSYMIPENEFHHKDPPPRNA
VASVQNGPGGGPSSSSIGSASKSDESSTEETDKSRERSQCGVKAVNKASSATPKGNSNNG
NSSSNSSKAVKENDKEKGKEKEKEKKEKTPATTPEARVLGKDGKEKPKEERPNKDEKARE
TKERTPKSDKEKEKFKKEEKAKDEKFKTTVPNVESKSIQEKEREKEPSRERDIAKEMKSK
ENVKGGEKTPVSGSLKSPVPRSDVAEPEREQKRRKIDTHPSPSHSSTVKLVYFQVTAILP
KVPLGSENYASSPVISIHFLQDSLIELKESSAKLYINHTPPPLSKSKEREMDKKDLDKSR
ERSREREKKDEKDRKERKRDHSNNDREVPPDLAKRRKEENGTMGVSKHKSESPCESPYPN
EKDKEKNKSKSSGKEKGGDSFKSEKMDKISSGGKKESRHDKEKIEKKEKRDSSGGKEEKK
HHKSSDKHR
NT seq
4890 nt
NT seq
+upstream
nt +downstream
nt
atggcggccgcaactgtggtggttcccgtagagtggataaagaactgggagaaatcaggg
agaggcgaatttttgcatttgtgccggatcctcagtgaaaataaaagccatgatagttca
acttacagagatttccagcaggctctttatgagttatcttaccatgtcattaaaggaaat
ctaaagcatgaacaggcatctaatgttcttaatgacattagcgaatttcgtgaggatatg
ccctccattcttgctgatgtattctgcatattagatattgagacaaattgtttagaagaa
aaaagcaagagagactattttacacaattggtattagcatgtttgtatttagtttcagac
acagttctaaaggaacgcctggatccagaaacattggaatcattagggcttatcaaacaa
tcacagcagttcaatcaaaagtcagttaaaatcaagacaaaactcttttataagcagcaa
aaattcaatttgttaagagaagagaatgaaggttatgccaagctgattgctgaattgggg
caagatttatctggaaatattactagtgatttaatcttagaaaatataaaatctttaata
ggatgctttaatctggatcccaatagagttttggatgtcattttagaagtgtttgaatgc
aggccagaacatgatgacttctttatatctttattagagtcttacatgagtatgtgtgaa
ccgcaaacactgtgtcatattcttgggttcaaattcaagttttaccaggaaccaaatgga
gagactccttcttctttatacagagttgctgcagtacttctacagtttaatcttattgat
ttagatgatctttatgtacatcttcttccagctgataattgcattatggatgaacacaaa
cgagaaattgtagaagctaagcaaattgttagaaaacttacgatggtagtattgtcttct
gaaaaaattgatgagcgagagaaagaaaaggaaaaagaagaggagaaagtagagaagccg
cctgacaaccaaaaacttggtttgttggaagccttgttaaagatcggtgattggcagcat
gcacagaacattatggatcagatgcctccatactatgcagcttcacataagctaatagcc
cttgctatttgcaagctcattcacataactattgagcctctctaccgaagagttggcgtt
cctaaaggtgctaaaggttcacctgttaatgctttgcaaaataagagggcaccaaaacaa
gcagagagctttgaagatttgaggagagatgtctttaatatgttctgttaccttggtcct
cacctttcacatgatcccattttatttgcaaaagtggtgcgcataggcaaatcatttatg
aaagagtttcagtctgatggaagcaaacaagaagataaagagaaaacggaagttatcctt
agctgtttacttagcattactgaccaggtacttcttccatctctttctttgatggactgc
aatgcttgtatgtctgaggaactgtggggaatgtttaaaacatttccatatcagcataga
tatcgtctgtatggccaatggaagaatgaaacttataacagtcacccacttttagtaaaa
gttaaagcccaaacaatagacagagccaaatatatcatgaagcgtctaaccaaggaaaat
gttaagccttccggaagacaaattgggaagttgagccacagcaatccaaccattttgttt
gattatgtatgttttgagatcttgtcacaaatacagaagtatgataatttaataacacct
gtagtagattcattgaaatacctcacttcattgaattatgatgttttggcctattgtatc
attgaagctttagctaatccggaaaaggagagaatgaaacatgatgacacaaccatctca
agttggcttcagagtctggctagtttctgtggtgcagtttttcgtaaatatccaattgat
cttgctggtcttcttcagtatgtggctaatcagctaaaggcaggcaaaagttttgacctg
cttatattgaaagaagtggtacaaaaaatggcaggaatagaaattacagaggaaatgacg
atggagcaactagaagccatgactggtggagagcaattaaaagctgagggtggttatttt
ggccagataagaaacactaaaaaatcctcccagagattaaaggatgcactattggaccat
gatcttgctcttcctctctgtttgcttatggctcagcagaggaatggagtaattttccaa
gaaggtggagagaaacatttgaaacttgtgggaaaactctatgatcagtgtcatgatacc
ttggtacagttcggtgggtttttagcatctaatctaagcacagaagattatataaagcga
gtgccttcgattgatgtgctctgtaatgaatttcatacaccccatgatgcagcatttttc
ctgtctaggccaatgtatgcacaccatatttcgtctaaatatgatgaacttaaaaagtca
gaaaagggaagtaaacaacaacataaagttcataagtacattacatcatgtgaaatggtg
atggcgcctgtccatgaagcagtggtctccttacatgtttccaaagtctgggatgacatc
agccctcagttctatgccacattctggtcattgacaatgtacgaccttgcagttccacac
accagctatgaacgggaagtcaataaacttaaagtccagatgaaagcaattgatgacaat
caggaaatgcctccaaataaaaagaaaaaagagaaagagcgttgtactgcccttcaggac
aagcttcttgaagaagaaaagaaacagatggaacatgtacagcgagttctacagagactg
aaactggaaaaggacaactggcttttagcaaaatctaccaaaaatgagaccatcacaaaa
tttctacagctgtgtatatttcctcgatgtattttttcagcaattgatgctgtttactgt
gctcgttttgttgaattggtacatcaacagaaaactccaaatttttccacacttctttgc
tatgatcgagttttctctgatataatttatacagttgcaagctgtaccgaaaatgaagct
agtcgatatgggagatttctttgctgcatgttagagactgtgaccaggtggcatagtgac
agagccacgtatgaaaaggaatgtggaaattatccaggattcctaactatattgcgggcc
actggatttgatggtggaaataaagctgaccagttagactatgaaaattttcgacatgtt
gtacataaatggcattacaaactaaccaaggcatccgtacattgccttgaaacaggcgaa
tatactcacatcaggaatatcttgattgtgctaacaaaaatacttccttggtacccaaaa
gttttgaatttgggtcaggctttggaaagaagagtgcataaaatctgccaagaagaaaaa
gagaagaggccagatctatatgcattggctatgggctactctgggcagttgaaaagtaga
aagtcatacatgatacctgaaaatgagtttcatcacaaagacccccctccgaggaatgca
gttgccagtgtacaaaatgggcctggtggtgggccttcttcatcgtcgataggaagtgca
tctaagtcggatgaaagcagtactgaggagactgataaatcaagggagagatctcagtgt
ggtgtgaaagctgttaataaagcttctagtgccacaccgaaaggaaattcaaacaatgga
aacagtagctctaacagcagcaaagctgttaaagaaaatgacaaagaaaaagggaaagag
aaagaaaaagagaaaaaagaaaagactccagctactactccagaggccagggtacttggt
aaagatggtaaagaaaaaccgaaggaagagcggccaaacaaagatgaaaaagcaagagag
acgaaggaaagaacacctaagtctgacaaagagaaagaaaaattcaagaaggaagaaaaa
gctaaagatgagaaattcaaaaccactgtccccaatgtagaatcaaaatcgattcaagaa
aaggaaagagagaaggagccatccagagaaagagatatagcaaaggaaatgaaatcaaag
gaaaatgttaaaggaggagaaaaaacaccagtttctgggtccttgaagtcacctgttccc
cgatcagatgttgcagagcctgaaagggaacaaaaacgccgcaaaattgatacccaccct
tctccatcacattcctcaacagtaaagctggtttatttccaggttacagccatacttccc
aaagttcctctgggttctgagaactatgccagctcacctgtcatctccattcattttcta
caggacagtctcatcgaactcaaggagtcttcagcaaagctctacattaatcatactcct
ccaccactgtccaagagtaaggagagagaaatggacaagaaagacttggacaagtcgagg
gaaagatccagagaaagagagaaaaaagatgaaaaggacaggaaagaacggaaaagggat
cattcaaacaatgaccgggaagtgccgccggacttagccaagaggcgaaaagaggaaaat
ggaacaatgggggtttcaaaacacaaaagtgaaagtccatgtgagtctccttatccaaat
gagaaagacaaggaaaaaaataagtcaaagtcttcaggcaaagaaaaaggtggcgattct
tttaaatctgaaaagatggataaaatctcctccggtggcaaaaaggagtccaggcatgat
aaagaaaagatagaaaagaaagagaaacgggacagttcaggaggaaaggaagagaagaaa
catcataagtcctcggacaagcacagataa
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integrated database retrieval system