Mustela lutreola (European mink): 131823439
Help
Entry
131823439 CDS
T09578
Symbol
XAB2
Name
(RefSeq) pre-mRNA-splicing factor SYF1
KO
K12867
pre-mRNA-splicing factor SYF1
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
131823439 (XAB2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131823439 (XAB2)
03041 Spliceosome [BR:
mlk03041
]
131823439 (XAB2)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
Other transport factors
131823439 (XAB2)
Spliceosome [BR:
mlk03041
]
Complex B
Other components
Prp19-related factors
131823439 (XAB2)
Complex C
131823439 (XAB2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_C
HAT_Syf1_M
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
TPR_14
TPR_12
TPR_2
TPR_8
Suf
TPR_19
TPR_15
ARM_TT21
ARM_TT21_C
TPR_NPHP3
TPR_1
Motif
Other DBs
NCBI-GeneID:
131823439
NCBI-ProteinID:
XP_059015788
LinkDB
All DBs
Position
2:5750954..5763675
Genome browser
AA seq
855 aa
AA seq
DB search
MVVMARLSRSERPDLVFEEEDLPYEEEIMRNQFSVKCWLRYIEFKQGAPKPRLNQLYERA
LKLLPCSYKLWYRYLKARRAQVKHRCVTDPAYEDVNNCHERAFVFMHKMPRLWLDYCQFL
MDQGRITHTRRTFDRALRALPITQHSRIWPLYLRFLRSHPLPETAVRGYRRFLKLSPESA
EEYIEYLKSSDRLDEAAQRLATVVNDERFVSKAGKSNYQLWHELCDLISQNPDKVQSLNV
DAIIRGGLTRFTDQLGKLWCSLADYYIRSGHFEKARDVYEEAIRTVMTVRDFTQVFDSYA
QFEESMIAAKMETASERGREEDDDVDLELRLARFEQLISRRPLLLNSVLLRQNPHHVHEW
HKRVALHQGRPREIINTYTEAVQTVDPFKATGKPHTLWVAFAKFYEDNGQLDDARIILEK
ATKVSFKQVDDLASVWCECGELELRHENYDQALRLLRKATALPARRAEYFDGSEPVQNRV
YKSLKVWSMLADLEESLGTFQSTKAVYDRILDLRIATPQIVINYAMFLEEHKYFEESFKA
YERGISLFKWPNVSDIWSTYLTKFIARYGGRKLERARDLFEQALDGCPPKYAKTLYLLYA
QLEEEWGLARHAMAVYERATRAVEPAQQYDMFNIYIKRAAEIYGVTHTRGIYQKAIEVLS
DEHAREMCLRFADMECRLGEIDRARAIYSFCSQICDPRTTGAFWQTWKDFEVRHGNEDTI
REMLRIRRSVQATYNTQVNFMASQMLKVSGSATGTVSDLAPGQSGMDDMKLLEQRAEQLA
AEAERDQPPRAQSKILFVRSDASREELAELAQQANPEEIELGEDEDEDEMDLEPNEVRLE
QQSVPAAVFGSLKED
NT seq
2568 nt
NT seq
+upstream
nt +downstream
nt
atggtggtgatggcgcgtctttcccggtccgagcggccggacctcgttttcgaagaagag
gacctcccctatgaggaggagatcatgcggaaccagttctcggtcaagtgctggctccgc
tacatcgagttcaaacaaggtgccccgaagccgcggctcaaccagctgtatgagcgggcg
ctgaagctgctgccgtgcagctacaaactctggtaccgatacctgaaggcccgccgggca
caggtgaagcaccgctgtgtcactgaccctgcctacgaagacgtcaacaactgccacgag
cgggccttcgtgttcatgcacaagatgccccgtctgtggctggactactgccagttcctc
atggaccagggccgcatcacgcacacgcgccgcacgtttgaccgtgccctccgcgccctg
cccatcacccagcactcccggatctggcccctgtacctgcgcttcctgcgttcccacccg
ctgcccgagacggccgtgcggggctatcggcgcttcctcaagctcagccccgagagcgcg
gaggagtacatcgagtacctcaagtccagcgaccggctggacgaagccgcgcagcgcctg
gccactgtggtcaacgatgagcgcttcgtgtccaaggccggcaagtccaactaccagctg
tggcacgagctctgtgacctcatctcccagaacccggacaaggtacagtcgctcaacgtg
gacgccatcatccgtgggggcctcacccgcttcacggaccagctgggcaagctctggtgc
tccctggctgactactacatccgcagcggccactttgaaaaggcccgagatgtgtatgag
gaggccatccggaccgtgatgaccgtgcgcgacttcacgcaggtgtttgacagctacgca
cagttcgaagagagcatgatcgcagccaagatggagacagcctcagaacgggggcgagag
gaggacgatgacgtggacctggagctgcggctggcccgcttcgagcagctcatcagccgc
cggcccctgttgctcaacagcgtcttgctgcgccaaaacccgcaccacgtgcacgagtgg
cacaagcgcgtggccctgcatcagggccgcccccgggagatcatcaacacgtacacggag
gctgtgcagacggtggaccctttcaaggcaacgggcaagccccacacgctgtgggtcgca
tttgccaagttttacgaggacaacgggcagctggatgatgcccgcatcatcctggagaag
gccaccaaggtgagcttcaagcaggtggacgacctggccagcgtgtggtgcgagtgtggc
gagctggagctccggcacgagaactacgaccaggccttgcggctgctgcgaaaggccacc
gcgctgcccgcccgccgtgctgagtacttcgacggctcggagcccgtgcagaaccgtgtg
tacaagtcgctgaaggtgtggtcgatgctcgctgacctagaggagagcctgggtaccttc
cagtccaccaaggccgtgtatgaccgcatcctggacctgcgcatcgccacgccccagatc
gtcatcaactacgccatgttcctggaggagcacaagtacttcgaggagagcttcaaggcg
tacgagcgtggcatctcgctgttcaagtggcccaacgtgtcggacatctggagcacctac
ctgaccaagttcatcgcccgctatgggggccgcaagctggagcgcgcgcgggacctcttc
gaacaggcgctggacggctgccctcccaaatacgccaagacgctctacctgctgtacgcg
cagctggaggaggagtggggcctggcccggcacgccatggccgtgtacgagcgcgccacc
agggccgtggagcccgcccagcagtacgacatgttcaacatctacatcaagcgggcagcc
gagatctatggcgtcacccacacccgcggcatctaccagaaggccatcgaggtgctgtcg
gacgagcacgcccgggagatgtgcctgcgcttcgcggacatggagtgccggcttggcgag
atcgaccgggcgcgcgccatctacagcttctgctcccagatctgtgacccccggaccacc
ggggctttctggcagacgtggaaggacttcgaggtccggcacggcaacgaggacaccatc
cgggagatgctgcggattcgccgcagcgtgcaggccacgtacaacactcaggtcaacttc
atggcctcgcagatgctcaaggtgtcgggcagcgccacaggcaccgtgtctgacctggcc
cccgggcagagcggcatggacgacatgaagctgctggagcagcgggcagagcagctggcg
gctgaggccgagcgggaccagcccccacgggcccagagcaagatcctgttcgtgaggagc
gacgcctcccgggaggagctggccgagctggcccagcaggccaaccccgaggagattgag
ctgggcgaggacgaggacgaggacgagatggacctggagcccaacgaggtgcggctggag
cagcagagtgtgccggccgccgtgttcgggagcctgaaggaggactga
DBGET
integrated database retrieval system
