Mustela lutreola (European mink): 131825302
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Entry
131825302 CDS
T09578
Symbol
SCAF4
Name
(RefSeq) SR-related and CTD-associated factor 4 isoform X1
KO
K13167
SR-related and CTD-associated factor 4
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
mlk03021
]
131825302 (SCAF4)
03041 Spliceosome [BR:
mlk03041
]
131825302 (SCAF4)
Transcription machinery [BR:
mlk03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131825302 (SCAF4)
Spliceosome [BR:
mlk03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
SR proteins
131825302 (SCAF4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
CID
RRM_1
RRM_occluded
Motif
Other DBs
NCBI-GeneID:
131825302
NCBI-ProteinID:
XP_059020561
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All DBs
Position
2:complement(212441921..212513412)
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AA seq
1145 aa
AA seq
DB search
MDAVNAFNQELFSLMDMKPPISRAKMILITKAAIKAIKLYKHVVQIVEKFIKKCKPEYKV
PGLYVIDSIVRQSRHQFGTDKDVFGPRFSKNITATFQYLYLCPSEDKSKIVRVLNLWQKN
GVFKIEIIQPLLDMAAGTSNAAPVAENVTNNEGSPPPPVKVSSEPPQATTNSVPTVPQLP
SSDAFAAVAQLFQTTQGQQLQQILQTFQQPPKPQSPAIDNAVMAQVQAITAQLKTAPAQP
PEQKAVFPPPEQKTAFDKKLLDRFDYDDEPEAVEESKKEDGATAAAAPPAMAVAPPAPSA
TTPAPAPAASPPQAPFGFPGDGMQQPAYTQHQTMDQFQPRMMTMQQDPVHHQVPLPPNGQ
MPGFGLLPTPPFPPMAQSVIPPTPPVQQPFQASFQAQSEPLTQKAHQEMEVEQPCIQEVK
RHMSDNRKSRSRSASRSPKRRRSRSGSRSRRSRHRRSRSRSRDRRRHSPRSRSQERRDRE
KERERRQKGLPQIKPETASVCSTTLWVGQLDKRTTQQDVASLLEEFGPIESINMIPPRGC
AYIVMVHRQDAYRALQKLSRGNYKVNQKSIKIAWALNKGIKADYKQYWDVELGVTYIPWD
KVKPEELESFCEGGMLDSDTLNPDWKGIPKKHENEVAQNGGAETSHTEPVSPIPKPLPVP
VPPIPVPAPITVPPPQVPPHQPGPPVVGALQPPTFTPPLGIPPPGFGPGVPPPPPPPPFL
RPGFNPMHLPPGFLPPGPPPPITPPVSIPPPHTPPISIPNSTIAGINEDTTKDLSIGNPI
PTVVSGARGNAESGDSVKMYGSAVPPAAPTNLPTPPVTQPVSLLGTQGVAPGPVIGLQAP
STGLLGARPGLIPLQRPPGMPPPHLQRFPLMPPRPMPPHMMHRGPPPGPGGFGMPPPHGM
KGPFPPHGPFVRPGGMPGLGGPGPGPGGPEDRDGRQQQPQPQQPPPPQPQPQQPPPAQQQ
QQQQPPPQQQPPPAQQQPQPFRNDNRQQFNSGRDQERFGRRSFGNRVENDRERYGSRNDD
RDNSNRERREWGRRSPDRDRHRDLEERNRRSSGHRDRERDSRDRESRRDKEENRGKEKPE
VTDRAGGNKTAEPPISQVGTVDTVSELGKGESESAVVKPSEELPAEATSSVEPEKDSGSA
AEAPR
NT seq
3438 nt
NT seq
+upstream
nt +downstream
nt
atggacgccgtcaacgccttcaaccaggagctcttttcacttatggatatgaaacctccc
atctctcgagccaagatgattcttatcactaaagctgctattaaagctattaagctttat
aagcatgtagttcaaatagtagaaaagttcatcaaaaagtgtaaaccagaatacaaggtt
ccaggattatatgtaattgactcaattgtgcgacagtctcgtcatcagtttggaactgat
aaagatgtttttggaccaagattctctaaaaacataaccgccacattccaatatttatat
ctttgtccatctgaagataagagtaaaatagttcgtgtgctgaacctttggcaaaaaaat
ggagtattcaaaattgaaattattcagcctcttttggacatggctgcaggaaccagtaat
gccgccccagtagcagaaaatgttactaataatgaaggttcacctccacctccagttaaa
gtttcttctgaaccgccccaagccactacaaactctgtaccaactgtaccacagctgcct
agctctgatgcttttgctgctgtggcccaactgtttcagacaactcaaggtcaacagctt
cagcagatccttcagacttttcaacagcctccaaaaccgcagtcgccggccattgacaat
gccgtgatggctcaggtccaggctatcacagctcagttaaagaccgctcctgcacagccg
cctgaacaaaaagctgttttccccccacctgagcaaaaaactgcatttgacaagaagcta
ctcgatagatttgattatgatgatgagccagaggctgtggaggaatccaagaaggaagat
ggtgccaccgctgccgccgctccacctgccatggctgttgcgcctcccgcaccctccgct
accacgccggcccccgcacctgccgcttcccctccacaggcaccctttgggtttcctgga
gatggcatgcagcagccagcatacacacagcatcagactatggatcagtttcagcctcga
atgatgacgatgcagcaggacccagtgcatcatcaggttccacttcctcctaatggacag
atgccaggatttggccttcttcctacacctccatttcctcccatggctcagtctgtgatt
cctccaactccacctgtgcaacagcctttccaagcttcttttcaggcacagagtgaacca
ctaacacagaaggcacatcaggaaatggaagtcgaacagccttgtattcaagaggttaag
cggcacatgtctgataacagaaagtcaagatctaggtcagcatccaggtcaccaaaaaga
aggcgatctcgatctggctctagatctcgaaggtcccgccatcgacgttctcgatctcgg
tccagagatagacgccgacattctcctagatctcggtcccaagaaaggcgagacagagaa
aaagaaagagaacgccgacaaaaaggccttccccaaatcaaaccagaaactgcgagtgtt
tgtagtactacactctgggtgggacagctggacaaaaggactactcaacaagatgttgcc
agtctcttagaagagttcggtccaattgaatcaattaatatgattcctcccagaggttgt
gcctatattgttatggttcataggcaagatgcctatcgtgccctgcagaaactgagccga
ggaaactataaagtaaaccagaaatccataaagattgcgtgggctttaaacaaaggaata
aaggcagattataagcagtattgggatgtagaactgggtgttacttatattccgtgggac
aaagtcaagcctgaagaactggagagtttttgtgaaggaggaatgttggacagtgataca
cttaatccagattggaaaggaatccccaagaagcatgaaaatgaagttgctcaaaatgga
ggggcagaaacttcacatacagaaccagtatcacccatacctaaacctttaccagtgcct
gtccctcctattcctgtccccgcacctataacagtgccacctccacaggtcccaccacat
cagccgggtcctcctgtagttggtgctctccagccacccactttcacgcctcccttgggc
attccccctccgggttttggtcctggtgttcctcctccaccacctcctccaccatttttg
cgcccaggatttaatccgatgcatttaccaccaggttttcttcctcctggacccccacct
cctataactccaccagtgtccattcctcctcctcacactcctccaataagcatcccaaac
tctactatcgctggtataaatgaagacactacaaaagacttatctattggaaatcccatt
ccaacagtggtgtctggggctagaggaaatgccgagtctggtgacagtgtgaaaatgtat
ggctctgccgtgccacctgctgcacccacgaatctgcccacccctcctgtaacccagcct
gtttcacttcttggtactcaaggagttgcacctggtcctgtaattgggctccaggcacca
tccactggtcttctcggtgcccgacctggcctgatcccacttcagcgccctccaggaatg
cctccacctcacttacagaggttccctttgatgccacctcgtcccatgccgccgcatatg
atgcaccgaggtccccctccaggaccggggggctttggaatgccgccacctcatggaatg
aaaggcccctttccaccacatggcccctttgttcggcctggcggaatgccagggctcggg
ggcccagggccaggcccagggggtcctgaagacagagatggaaggcagcagcaaccccag
ccgcagcagcccccaccgccgcagccgcagccccagcagcctccacccgcgcagcagcag
cagcagcagcagccgccgccgcagcagcagccaccgcctgcacagcaacaaccacagccg
tttagaaatgataacaggcagcagttcaattcaggtagagaccaagagaggtttggaaga
agatcttttggaaatagggtggaaaatgaccgggaacggtatgggagccgtaatgatgat
agagataatagtaaccgtgaaaggagagagtggggaagaaggagccctgaccgggacagg
cacagagacttggaagagagaaatagacgctctagtgggcatcgagacagagagagagat
tctagagatagagagtctcgtagagataaggaagaaaaccgaggaaaggagaagcccgag
gtgacagacagggcaggtggtaacaaaaccgctgaacctcccattagccaagtgggaacc
gtagacactgtttcagaacttggtaagggggagtctgagtctgccgttgtaaaaccttct
gaagagctacctgctgaggctacctcatccgttgaacccgaaaaggattctggctcagca
gcagaggctcctcgttag
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