Mustela lutreola (European mink): 131826799
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Entry
131826799 CDS
T09578
Symbol
HTT
Name
(RefSeq) huntingtin isoform X1
KO
K04533
huntingtin
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk05016
Huntington disease
mlk05022
Pathways of neurodegeneration - multiple diseases
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09160 Human Diseases
09164 Neurodegenerative disease
05016 Huntington disease
131826799 (HTT)
05022 Pathways of neurodegeneration - multiple diseases
131826799 (HTT)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mlk03019
]
131826799 (HTT)
04131 Membrane trafficking [BR:
mlk04131
]
131826799 (HTT)
03029 Mitochondrial biogenesis [BR:
mlk03029
]
131826799 (HTT)
Messenger RNA biogenesis [BR:
mlk03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
131826799 (HTT)
Membrane trafficking [BR:
mlk04131
]
Endocytosis
Rab GTPases and associated proteins
Rab associated proteins
131826799 (HTT)
Mitochondrial biogenesis [BR:
mlk03029
]
Mitochondrial quality control factors
Regulator of mitochondrial biogenesis
Other regulator of mitochondrial biogenesis
131826799 (HTT)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Htt_C-HEAT
Htt_N-HEAT
Htt_bridge
Htt_N-HEAT_1
HEAT
HEAT_EF3_N
Motif
Other DBs
NCBI-GeneID:
131826799
NCBI-ProteinID:
XP_059022374
LinkDB
All DBs
Position
1:complement(66706786..66844892)
Genome browser
AA seq
3129 aa
AA seq
DB search
MATLEKLMKAFESLKSFQQQQQQQQPPPPPPQLPQPPPQAQPPPPQPQPPPPPPPPPPPG
PAVAEEPLHRPKKELSATKKDRVNHCLTICENIVAQSLRNSPEFQKLLGIAMELFLLCSD
DAESDVRMVADECLNRVIKALMDSSLPRLQLELYKEIKKNGAPRSLRAALWRFAELAHLV
RPQKCRPYLVNLLPCLTRISKRPEESVQETLAAAVPKIMASFGNFANDNEIKVLLKAFIA
NLKSSSPTIRRTAAGSAVSICQHSRRTQYFYSWLLNVLLGLLVPVESEHSTLLILGVLLT
LRYLVPLLQPQVKDTSLKGSFGVTRKELEVSPSTEQLIQVYELTLHYTQHQDHNAVTGAL
ELLQQLLRTPPPELLRALSAPGGGPLSTVRHQPGCRSRSGSIVEILAGGGSSCSPVLSRK
QKGKVLFGEAAALEDDSESRSEGSSPAFTASVKGEIGGELAASSGVSTPGSASSAADSVG
HDIITEQPRSQHTLQPDSVDLTSCDLASAATDGDEEDILSHSSSQISAVPSDPAMDLNDG
TQASSPVSDSSQTTTEGPDSAVTPSDSSEIVLDGADSQYSGMQIGQPPDEDEEATGVLPD
EDADAFRSSSVALQQAHLLRSMGHSRQASDSSIDKFVSKDEAAEPGDQENKPCRIKGDIG
QSTDDDSVPLVHCVRLLSASFLLTGEKNVLVPDRDVRVSVKALALSCVGAAVALHPESFF
SKLYKVPLDTMEHPEEQYVSDILNYIDHGDPQVRGATAVLCGTLISSILSRSRFQVGDWM
GTVRALTGNTFSLVDCIPLLQKTLKDESSVTCKLACTAVRHCVTSLCSSSHSELGLQLVT
DLLTLRDSSYWLVRTELLETLAEIDFRLVSFLEAKAENLHRGTHHYTGLLKLQERVLHDV
VIYLLGDEDPRVRHVAAAALIRLVPKLFYKCDQGQADPVVAVARDQSSVYLKLLMHETQP
PSHFSVSTITRIYRGYNLLPTMTDVTVENNLSRVIAAVSRELVTSTTRALTFGCCEALCL
LSTAFPVCIWSLGWHCGVPPLSASDELRKSCTVGMATMILTLLSSAWFPLDLSAHQDALI
LAGNLLAASAPKSLRSSWTSEEEVSPATAKQEEVWPALGDRTLVPMVEQLFSHLLKVINI
CAHVLDDVAPGPAIKAALPSLTNPPSLSPIRRKGKEKEPGEPASVPLSPKKGSEASPASR
QSDAPGPVTANKSSSLGSFCHLPSYLKLHDVLKATHANYKVTLDLQNSTEKFGGFLRSAL
DVLSQILELATLQDIGKCVEEILGYLKSCFSREPVMATVCVQQLLKTLFGTNLASQFDGL
SSNPSKSQGRAQRLGSSSVRPGLYHYCFMAPYTHFTQALADASLRNMVQAEQDHDPSGWF
DVLQKVSTQLKTNLTSTTKNRADKNAIHNHIRLFEPLVIKALKQYTTTTSVQLQRQVLDL
LAQLVQLRVNYCLLDSDQVFIGFVLKQFEYIEVGQFRESEAIIPNIFFFLVLLSYERYHS
KQIIGIPKIIQLCDGIMASGRKAVTHAIPALQPIVHDLFVLRGTNKADAGKELETQKEVV
VSMLLRLVQHHQVLEMFILVLQQCHKENEDKWKRLSRQIADVILPMLAKQQMHIDSHEAL
GVLNTLFEILAPSSLRPVDMLLRSMFVTPDTMASVSTVQLWISGILAILRVLISQSTEDI
VLSRIQELSFSPYLICCPVINRLRDGDSTSTPEEHSEGRQIKSLPEETFSRFLLQLVGIL
LEDIVTKQLKVEMSEQQHTFYCQELGTLLMCLIHIFKSGMFRRITAAASRLFTVDSTDSS
FYGLERLNARVRAMVPTHPALVLLWCQILLLVSHTDYRWWAEVQQTPRRRSLSSTKSLSP
QMPGEEEDPGAACKLGMCNREIVRRGALILFCDYVCQNLHDSEHLTWLIVNHIQDLISLS
HEPPVQDFISAVHRNSAASGLFIQAIQSRCENLSTPTTLKKTLQCLEGIHLSQSGAVLTL
YVDKLLCTPFRVLARMVDTLACRRVEMLLAANLQSSAAQLPAEELSRIQEYLQSSGLAQR
HQRLYSLLDRLRLATAPGSRGPSPLGTSHPLDRDGPLALETMVPDKDWYLRLVKSQCWTR
SDSALLEGAELVNRLPPSDMSTFMMNSEFNLSLLAPCLGLGMCEVSGGQRSPLFEAARLA
TLDRVTSLVQQLPAAHHVFQPFLPVEATAYWNKLNDLFGDGMLYRSLTTLARALAQYLLV
FPKLPSHLHLPPEKERDTVKFVVMTLEALAWHLIHEQIPLSLDLQAGLDCCCLALQLPSL
WSTLSSPEMVTHACSLIHCVRFVLEAVVVQPGDQLLSPERRMNIPKASRENEIDSDTQNP
AYITAACAMVAEMVESLSSVLALGHKRNSNTPAFLTSVLRNIIISLARLPLVNSYTRVPP
LVWKLGWSPKPGGDFGTAFPEIPVEFLQEKEVFKEFIYRINALGWTSRTQFEETWATLLG
VLVTQPLVMEQEESPPEEDTERTQINVLAVQAITSLVLSAMTVPVAGNPAVSCLEQQPRN
KPLKALDTRFGRKLSIIRGIVEQEIQAMVSKRENIATHHLYQAWDPVPSLSPATTGALIS
HDKLLLQINPERELGNMSYKLGQVSIHSVWLGNSITPLREEEWEEEEEEEADVPAPASPP
TSPVNSRKHRAGVDIHSCSQFLLELYSRWILPSGSARRTPIILISEVVRSLLVVSDLFTE
RTQFEMMYSALTELRRVHPAEDEILTQYLVPATCKAAAVLGMDKAVAEPVSRLLESTLRS
SHLPSKVGALHGALYVLECDLLDETAKQLVPVISDYLLSNLKAVAHCVNIHSQQHVLVMC
ATAFYLIENYPLDVGPEFSASIIQMCGVMLSGSEESTPSIIYHCVLRGLERLLLSEQLCR
LDAESLVKLSVDRVNVHSPHRAMAALGLMLTCMYTGKEKLSPGRSSDPSPATPDSESVIV
AMERVSVLFDRVRKGFPCEARVVARILPQFLDDFFPPQDVMNKVIGEFLSNQQPYPQFMA
TVVYKVFQTLHTTGQSSMVRDWVMLSLSNFTQRTPVAMAVWSLSCFFVSASTSPWVSAVL
PHVISRMGKLEQVDINLFCLVATDFYRHQIEEELDRRAFQSVFEVVAAPGNPYHRLLTCL
RNVHKVAAC
NT seq
9390 nt
NT seq
+upstream
nt +downstream
nt
atggcgaccctggagaagctcatgaaggccttcgaatccctcaagtccttccagcagcaa
cagcagcagcagcagcctccgccgccgccgcctcagcttcctcagccgccgccgcaggcg
cagccgccgccgcctcagccgcagccgcccccacccccgccgcccccgccgccccccggc
ccggcggtggccgaggagccactgcaccgaccaaagaaagaactctcagccaccaagaaa
gaccgtgtgaaccattgtctgacaatatgtgaaaacatagtggcacagtcactcagaaat
tctccagaatttcagaaacttctgggcatcgctatggaacttttcctgctgtgcagtgat
gatgcagagtcggatgtccggatggtggctgatgagtgcctcaacagagtcatcaaagcc
ctgatggactccagtctgccgaggctgcagttagagctgtataaggaaatcaaaaagaac
ggtgctccccggagccttcgtgctgccctgtggaggtttgctgagctggcacacctggtc
cggcctcagaagtgcaggccttacttggtaaaccttttgccttgcctgactcgaataagc
aagagacctgaggaatctgttcaggagaccttggctgcagctgtacccaaaattatggct
tcttttggcaattttgcaaatgacaatgaaattaaggttctactaaaggctttcatagcg
aatctgaagtcaagctccccgaccattcggcgaacggcggctggctcagcagtgagcatc
tgccagcactcgaggaggacccagtacttttacagctggctattgaatgtgctcttgggc
ttgctggtccccgttgagagtgaacactccaccctcctgattcttggggtgctgctcaca
ctcaggtacctggtgcccttgctgcagcctcaggtcaaagacacgagcctgaaaggcagc
tttggggtgacgcggaaggaactggaagtctcaccctcaacagagcagctcatccaggtc
tatgaactgaccttgcactacactcagcaccaagaccacaacgcagtgacaggcgcgctg
gagctcctgcagcagctgttgcggacgcccccgcctgagctcctgcgggccctgagcgct
ccaggcggtgggccactctccactgtgcgccaccagcctggctgccggagccgcagcggc
agcatagtggagatcctggctggagggggttcttcatgcagccctgtcctttcaaggaaa
caaaaagggaaagtgctctttggagaagcagcagccttggaggatgactctgagtccaga
tcggagggcagcagccccgccttcacagcctcagtcaaaggtgagattggcggtgagctg
gctgcgtcttctggagtctccactcctggctctgccagttcagctgcggactctgtgggc
catgacatcatcaccgagcagccccggtcacagcatacgctgcagccagactcggtggat
ctgaccagctgtgacctggcgagcgcagccaccgatggggacgaggaggatatcctgagc
cacagctccagccagatcagtgccgtcccgtctgacccagccatggacctaaatgatggc
acccaggcctcctccccagtcagcgacagctcccagaccaccactgagggacctgattca
gctgtgaccccttcggacagttctgaaattgtgttagacggtgctgacagccagtattcg
gggatgcagatcggacagccaccggacgaggatgaggaagccacgggtgtccttccagat
gaagatgcagatgctttccgaagctcttcagttgctcttcagcaagcacatttactgaga
agcatgggccacagcagacaggcctctgacagcagcatcgataaatttgtctccaaagat
gaagctgctgaaccaggagatcaagaaaacaagccttgccggatcaaaggtgacataggg
cagtctaccgatgacgattctgttcctcttgtccattgtgtccgccttctgtctgcttca
tttttgctgactggggagaaaaatgtgttggttccggatagggacgtgagggtcagtgtg
aaggcgctggcgctcagctgtgtgggagctgctgtggcccttcatcccgagtccttcttc
agcaaactttataaagtgcctcttgacaccatggagcaccctgaggagcagtatgtgtca
gacatcctgaactacattgatcacggagacccccaggtcagaggagccacggctgttctc
tgtgggaccctcatctcctccatcctcagcaggtcccgcttccaagtgggggactggatg
ggcaccgtcagagccttgacaggaaatacattttctctggtggactgcattcctttgctg
cagaaaactttgaaggatgaatcttctgtgacttgcaagttggcttgtacagctgtgagg
cactgtgtcacgagtctttgcagcagcagccacagcgaactggggctgcaactggtcacc
gacttgctgactctgagggacagctcctactggctggtgaggacagagcttctcgagact
cttgcagagattgactttaggttggtgagctttttggaggcaaaagcagaaaacctgcat
agagggacccatcattacacagggcttttaaaactgcaagaacgagtgctccatgatgtg
gtcatctatctgctcggggacgaggaccccagggtgcggcatgttgcggcagcggccttg
ataaggcttgtcccgaaactgttctataaatgcgaccaaggacaagccgaccccgtcgtg
gctgtggcgagagatcaaagcagtgtttacctgaagctcctcatgcacgagactcagcct
ccatctcacttctctgtcagcaccatcaccagaatatacagaggctataacttactgcca
accatgacagacgtcacagtggaaaacaacctctccagagtcattgcggccgtttcccgt
gaactggtcacatcgaccacgcgtgcactcacctttgggtgctgtgaagctctgtgtctc
ctttcaacagcctttcccgtctgcatttggagtttaggttggcattgtggggtgccccca
ctgagcgcctccgacgagttgagaaagagctgtactgttggcatggccacgatgatcctc
accttgctctcgtcagcgtggttcccactggatctctcagcccatcaggatgctttgatt
ttagctggaaacttgcttgcagccagtgcccccaaatctctgagaagttcatggacctct
gaagaagaggtcagcccagcaactgccaagcaggaagaggtctggccagctctgggtgac
cggaccctggtgcccatggtggaacagcttttctcgcacctgctgaaggtgattaatatc
tgtgctcacgtcttggacgacgtggctcccggaccagcaataaaggcagccttgccatct
ctgacaaaccctccatctttgagtcccatccgacggaagggaaaggagaaagaacccgga
gagccagcctctgtgcccttgagccccaagaaaggcagtgaagccagtccagcctctcga
caatctgatgccccagggcctgttacagcaaataagtcctcatcgttggggagtttctgt
caccttccttcgtacctcaaattgcacgacgtcctgaaagctactcacgccaactacaag
gttaccttggatcttcagaacagcactgaaaagtttggaggctttctgcgctctgccttg
gatgttctctctcagatcctggagctggcaacgctgcaggacattgggaagtgcgttgaa
gagatcctggggtatctgaaatcctgcttcagtcgggaaccagtgatggcaactgtttgc
gttcagcagctgttgaagactctctttgggaccaacttggcctcccagtttgatggcttg
tcatccaaccccagcaagtctcagggccgagcacaacgtctgggctcctccagtgtgagg
ccgggcttgtaccactactgcttcatggctccatacacgcacttcacccaggccttagct
gatgccagcctgaggaacatggtgcaggcggagcaggaccacgacccctcagggtggttt
gatgtccttcagaaggtgtctacccagttgaagaccaacctcacaagcaccacaaagaac
cgcgcggataagaatgctattcataatcacatccgcttgtttgagcctctggttattaag
gctctaaaacagtacacgaccaccacgtccgtgcagctgcagaggcaggtgctggacctg
ctggcgcagctggtgcagttacgggtcaattactgtctgctggactctgatcaggtgttt
attggattcgtgctgaagcagtttgaatacattgaagtgggccagttcagggaatcagag
gcaattattccaaacatctttttcttcctggtattactgtcttatgaacgctatcattca
aaacagatcattggaattcctaaaatcattcagctgtgtgatggcatcatggccagtggg
aggaaggctgtgacacatgccattccagctctgcagccaatagtgcatgacctctttgta
ctgagagggaccaacaaagccgacgctggaaaagagcttgaaacccaaaaagaggtggtg
gtatccatgctgctgagactcgtccagcaccatcaggtgctggaaatgttcatcctggtt
ttgcagcagtgccacaaggagaacgaagacaaatggaagcgactgtcccggcagatcgcc
gacgtcatcctcccgatgttagccaagcagcagatgcacattgattctcatgaagccctt
ggagtgctaaatactttatttgagattctggccccttcctccctccgtcctgtggacatg
ctattacggagtatgtttgtcactccagatacaatggcatctgtaagcactgttcaactg
tggatctcaggaatcctagccattttgagggttctgatttcccagtcaactgaagatatt
gttctctctcgtattcaggagctctccttctccccatatttaatctgctgtccagtaatt
aataggttaagagatggggacagtacttcaacaccggaagaacacagtgaaggaaggcaa
atcaagagtttgccggaggaaacattttcaaggtttctactacaactagttggcattctt
ttggaggatattgttacaaagcagctcaaagtggaaatgagtgaacagcagcatactttc
tattgtcaagagctaggcacactgctaatgtgtctgattcacatcttcaagtctggaatg
ttccgaagaatcacagccgctgcctccagactcttcacggtagatagcaccgacagcagt
ttctacggcctggagaggctgaacgcgcgggtgcgcgccatggtgcccacgcacccggcc
ctggtgctgctctggtgccagatcctgctgctggtcagccacaccgactaccgctggtgg
gcagaggtgcagcagacccccaggagacgcagtctgtccagtacgaagtcactcagcccc
cagatgcctggagaggaggaggaccctggtgcggcctgcaagcttgggatgtgcaataga
gagatagtgcgaaggggagctctcattctcttctgcgattatgtctgtcagaacctgcac
gattcagagcacctaacgtggctcatcgtgaatcatatccaggacctcatcagtctgtcc
cacgagcctcccgtgcaggatttcattagtgctgttcaccggaactctgctgccagtggc
ctcttcatccaagcaattcagtcccgctgtgaaaatctttccaccccgaccaccctgaag
aagacacttcagtgcttggaagggatccacctcagccagtcaggtgctgtgctgacgttg
tacgtggacaagctgttgtgcactccattccgtgtgctggctcgcatggttgacacgctg
gcttgtcgccgggtggaaatgcttctggctgcaaatttacagagcagtgcggctcagctg
cccgcagaggagctgagcaggatccaggagtaccttcagagcagcgggctggcgcagaga
caccagaggctctactccctgctggacaggcttcgtctcgccaccgcacctggctcacgc
ggcccttctcctctgggcacgtcccatccgctggacagggatgggcccctggcactggag
accatggttccagacaaagactggtacctgcgtctagtcaaatcccagtgctggactagg
tcagattctgcactgctggaaggggcagaactggtgaatcggcttcctcccagtgacatg
agcacattcatgatgaactcggaattcaacttaagcctgctggccccatgcctgggcctg
ggcatgtgcgaagtctctgggggccagaggagccccctttttgaagcagctcgcctagca
actctggaccgtgtgaccagcctggttcagcagcttcctgctgcccatcatgtcttccag
ccattcctgcctgtggaggccactgcctactggaacaagttgaatgatctatttggggat
ggcatgttatatcggtccttgaccactctggcccgggccctggcccagtacctgctggtg
ttccccaaactgcccagccatttgcacctcccccctgagaaggagagggacactgtgaag
tttgtggtcatgaccctcgaggccctggcgtggcatctgatccatgagcagatcccgctg
agtctggaccttcaggcgggcctggactgctgctgcctggccctgcagctccccagcctc
tggagcacactctcctccccggagatggtgacccatgcctgctctctcattcactgtgtc
cgtttcgttctggaagccgttgtggtgcagcctggggaccagcttcttagtccagagaga
aggatgaacatcccgaaggcttccagagagaacgaaatagattcagacacacaaaacccg
gcgtacatcactgcagcctgtgcgatggtggcagagatggtggagtctttgtcatcggtg
ttagccttggggcacaaaaggaacagcaacacccctgcgtttctcacatcagtgctcagg
aacatcatcatcagcctggctcgcttacccctcgtcaacagctacacacgcgtgcccccc
ttggtttggaagctcggatggtcgcccaagccaggaggggactttggcacagccttccct
gagatcccggtagagttcctccaggagaaggaagtctttaaagagttcatctaccgcatc
aatgcactaggctggaccagccgcactcagttcgaggagacgtgggccaccctccttggt
gtcctggtgactcagcccctggtgatggagcaggaggagagcccaccagaagaagacaca
gagaggacccagatcaatgtcctggctgtgcaggccatcacatcgctggtgctgagtgca
atgactgtgcctgtggccggcaaccctgctgtgagctgcttggagcagcagccccggaac
aagcccctgaaagccctcgacaccaggtttgggaggaagctgagtattatccgaggaatt
gtagagcaggaaatccaagcaatggtttcaaagagagagaacatcgccacccatcactta
taccaggcgtgggaccccgtcccttctctgtctccagctacgacaggtgccctcatcagc
cacgacaagctcctgctacagatcaaccccgagcgggaactggggaacatgagctacaag
cttggacaggtgtccattcactccgtgtggctggggaacagtatcacgcccctgagagag
gaggagtgggaggaagaggaagaggaggaagccgatgtccctgccccggcgtcaccaccc
acgtcacccgtcaactccaggaagcaccgggcgggggttgatatccactcctgctcccag
tttctgctcgagttgtatagtcgctggatcctgccgtcaggttcagcccgaaggacgccc
atcatcctgatcagtgaagtggttcgatctctcctggtggtgtcggacttgttcacggag
cgcacccagtttgagatgatgtactcggcgctcacagagctgcggagggtgcaccctgcc
gaagacgagattctcacccaatacctggtgcctgccacctgcaaggcggctgctgtcctc
gggatggacaaggctgtggcagagccagtcagccggctgctagagagcacgctgaggagc
agccacctgcccagcaaggttggggccctgcacggtgctctctatgtgctggagtgcgac
cttctggacgagacagcaaagcagctcgtaccagtcatcagcgactatctcctctccaac
ctcaaggcggtggcccactgcgtgaacattcacagccagcagcatgtgctggtcatgtgc
gccaccgccttctacctgatcgagaactatcctctggacgtgggcccagagttctcagcc
tcaatcatacagatgtgtggggtgatgctgtccggaagtgaggaatccaccccatccatc
atctaccactgcgttctgcggggcctggaacgcctcctgctctcagaacaactctgccgg
ctggatgcggagtccctggtcaagctgagtgtggacagagtgaatgtgcacagcccacac
cgggccatggccgccctgggcctgatgcttacctgcatgtacacaggaaaggagaaactc
agtccgggcagaagctcagaccccagccctgcgaccccagacagcgagtcagtgattgtg
gcaatggagcgcgtgtctgttctttttgacagggtcaggaaagggttcccctgtgaagcc
agagtggtggcacggatccttcctcagtttttggatgacttcttcccaccccaggatgtc
atgaacaaagtcattggagaatttctgtccaaccagcagccatacccacagttcatggcc
actgttgtgtacaaggttttccagactctacacaccactgggcagtcatccatggtccgg
gactgggtcatgctgtccctctccaacttcacacagaggaccccagtggccatggctgtg
tggagcctctcctgcttcttcgtcagtgcttccactagcccatgggtctcggctgtcctt
ccccacgtcatcagcaggatgggcaagctggagcaagtggacattaacctcttctgcctg
gtggccacggacttttacagacaccagatagaagaggagctggaccgccgggcctttcag
tctgtgttcgaggtggtcgcagcaccaggaaacccgtatcatcgactgctgacttgtttg
cggaacgtccacaaggtcgctgcgtgctga
DBGET
integrated database retrieval system
