Mustela lutreola (European mink): 131827373
Help
Entry
131827373 CDS
T09578
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain isoform X1
KO
K06237
collagen type IV alpha
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04151
PI3K-Akt signaling pathway
mlk04510
Focal adhesion
mlk04512
ECM-receptor interaction
mlk04820
Cytoskeleton in muscle cells
mlk04926
Relaxin signaling pathway
mlk04933
AGE-RAGE signaling pathway in diabetic complications
mlk04974
Protein digestion and absorption
mlk05146
Amoebiasis
mlk05165
Human papillomavirus infection
mlk05200
Pathways in cancer
mlk05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
131827373 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131827373 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131827373 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131827373 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
131827373 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
131827373 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
131827373 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
131827373 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
131827373 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
131827373 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
131827373 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
mlk04147
]
131827373 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
mlk00536
]
131827373 (COL4A3)
Exosome [BR:
mlk04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
131827373 (COL4A3)
Glycosaminoglycan binding proteins [BR:
mlk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131827373 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
131827373
NCBI-ProteinID:
XP_059023830
LinkDB
All DBs
Position
3:complement(175313434..175440693)
Genome browser
AA seq
1669 aa
AA seq
DB search
MRPGTAPRPPVLLRLLLLVLLAAAPTTGKGCVCKDKDQCFCDGIKGEKGEKGFPGPAGSP
GQKGFPGPEGLPGPQGPKGSPGLPGFTGPKGVRGITGLPGFSGPPGLPGTPGHPGPYGPA
GVPGCNGSKGERGFPGLPGTPGYPGIPGAIGLKGEKGAPAAEDIELDGRGDPGLPGVPGF
QGLPGLPGFPGPVGPPGPPGFLGFPGPMGPPGPKGHMGDNVIGQKGEQGVKGLTGPPGPP
GTVIVTLTGPDNRTDLKGEKGDKGAMGKSGPPGPSGPPGESYGSQKGAPGEPGPQGKPGK
DGAPGFPGTEGAKGNRGLPGLQGEDGIKGWKGDIGPPGFRGPTEYYDVYQEKGDEGLPGP
PGPKGARGPQGPRGSPGVPGIAGSSRPGLRGAPGPPGVKGIKGERGPPGKNAVGPPGSPG
CPGSPGPIGLPGYPGPPGDIVFRKGPPGSGGFPGLIGFPGIPGADGPKGEPGLLCIKCPY
IPGPPGLPGLPGLDGIKGIPGGQGAAGIKGSPGSPGSAGLPGSPGFPGAPGDPGLKGEKG
EASKPEGEVGAPGDPGLRGHPGRRGLDGIPGTPGIKGSPGPKGEPALSGEKGDRGPLGDP
GIPGSPGPAGPPGPANYGPRGEPGPKGTQGVPGAPGPPGEAGPKGDFGISTPVPGPPGPP
GPPGRAGPQGPPGIPGSRGKCDPGLPGPDGEPGIPGIGFLGPPGPKGEQGFPGAKGAPGC
PGEMGKPGPPGEPGLPGAKGEPGLAMPGQPGTPGFPGERGISGENGEIGFPGPPGLPGIP
GTGGVGGPQGDPGKPGPPGEKGPPGRCTEGPRGAQGLPGLNGLEGQPGRRGETGPKGDPG
IPGLDRSGFPGEPGPPGMPGHRGAMGPPGQKGYPGNPGFLGPPGEKGMMGMMGYPGDAGP
PGPPGNPGAPGQRGSFGIPGAKGEKGPPGTKGEEGDKGPRGPSQISTLLGDKGEPGLKGF
AGKPGEKGNRGIPGLPGLKGPEGPPGPPGPPGPRGDSGSVGNPGQPGPRGGPGSMGNMGV
PGPKGHRGALGLPGLIGRPGLPGVPGLQGDKGEPGYSASTRPGPPGPKGDPGLPGDMGRK
GERGLPGTPGHSGPAGTEGAPGNPGSPGHPGKPGPDGDLGLKGIKGFPGFPGVKGPPGPP
GYPGPPGPMGMRGSQGRDGIPGPAGEKGETGLLGAPPGPRGSPGFPGAKGDRGAPGLPGL
PGRKGVVGDTGPRGPTGIMGLPGPPGFPGAIIPGQKGNRGPPGFRGNPGEPGPPGPPGSH
VRGIKGDKGLMGEPGPRGLPGTIGAEGPLGPPGAPGSPGLPGLRGDPGFHGFPGVKGEKG
NPGFLGPAGPPGQIGPKGPPGVRGDPGTVKIISLPGSPGPPGRAGGPGMQGEPGPPGPPG
ILGPCGPRGKPGKDGRPGTPGPIGEKGNKGCKGEKGPPGSDGLPGLKGKPGHIGPPATGP
MRRGFIFTRHSQTTVIPSCPEGTEPLYSGFSLLFVQGNEQAHGQDLGTLGSCLQRFTTMP
FLFCNINDVCNFASRNDYSYWLSTPAPMPMDMAPITGRALEPYISRCTVCEGPTNAIAIH
SQTTAIPSCPNGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRGT
CNYYSNSYSFWLASLNPQRMFRKPIPSTVKAGELEKIISRCRVCMKRRQ
NT seq
5010 nt
NT seq
+upstream
nt +downstream
nt
atgcgccccgggacggcgcccaggccgcccgtgttgctgcgcctgctcctgctggtactc
ctggcagcggcgccaacgacaggcaagggctgtgtctgcaaagacaaagaccagtgcttc
tgtgatgggatcaaaggggagaagggggagaaaggctttcctggacctgctggttctcct
ggccagaagggattcccaggtcccgaaggcttgcctggaccacagggacccaagggctca
ccaggactcccaggattcactggtcccaaaggtgtgaggggaataacaggattgccggga
ttttcaggtcctcctggacttccaggcaccccgggccatcctgggccctatggacctgcc
ggtgtcccaggatgcaatggttctaagggtgagcgagggtttccaggccttccagggaca
ccagggtacccggggatcccgggtgctattggtttgaaaggagaaaagggtgcccctgct
gcagaagatatagaacttgatggaagaggtgaccctgggttgccaggagttccgggattc
cagggtttgccaggccttccaggctttccgggacctgttggtccacctggccctccagga
ttcttaggctttccaggacccatgggacctccaggacctaagggtcacatgggcgataat
gtgataggacaaaaaggagagcagggtgtaaaaggattaacaggacccccgggaccacca
ggaacggttattgtgacactaactggcccggataacagaacggacctcaaaggggagaag
ggagacaagggagccatggggaaatctggacctcctggaccctcaggaccgcctggagaa
tcttatggatctcaaaagggtgctcctggagaacctggcccgcagggaaaacctggcaaa
gatggtgcccctggtttccctggcactgagggagccaaaggcaacaggggcctccctggg
ttacagggtgaagacggcattaaggggtggaaaggggacattggccctccaggatttcgt
ggtccaacagaatattatgatgtataccaggaaaagggagatgaaggacttccaggccca
ccaggccctaaaggagctcgtggcccacaaggtccccgtggctctcctggggttcctgga
attgctgggtcatcaaggcctggcctccgaggagcccctggacctccaggcgtgaaagga
attaaaggggaacgagggcccccaggaaagaatgcagtggggcctcccgggtccccgggt
tgtcctggctcgccaggccctatagggttgccgggatatccaggaccaccaggtgacatc
gtttttcgcaaaggtccacctggaagtggtggattcccaggccttatagggtttccagga
atcccaggagctgatggtcccaaaggggaacctggcctcttgtgcataaaatgtccttat
atcccagggcctccgggcctcccaggactgccagggttggacggcataaaaggaatccca
ggaggccaaggggcagctggtattaaaggaagcccagggtccccgggaagtgcgggtctt
ccaggatctccaggattcccgggtgctccgggggatccaggacttaaaggagaaaaaggt
gaagcatcgaagcctgagggagaagtgggtgccccaggggaccctgggctcagagggcat
cctggaagaaggggcttggacggaattcctggaactcctgggatcaaaggatcaccagga
cccaaaggtgaaccggccctgagtggtgagaagggggaccggggtcctctgggggatcct
ggcatccctgggtccccaggacctgcaggaccacctggaccagcaaactatggaccacgg
ggagaacctggtccaaagggcacccaaggagttcctggagcccctggaccacctggagaa
gccggtcctaagggagactttggtatttcgacaccagtcccagggccaccaggacctcca
gggccccctggccgtgctggcccccaaggtccacccggtatccctggatccagaggaaaa
tgtgacccgggtcttcctgggcctgatggtgaaccaggaattccaggaatcggcttcctt
gggccccctggacctaagggagagcaaggttttcctggagcaaaaggagcaccgggttgt
ccaggagaaatggggaagcccgggccacccggagaaccaggtctcccaggagccaaggga
gaaccaggactagccatgcctggacaaccaggaacaccaggttttccaggagaaagaggc
atttctggggaaaatggagaaattggattccctggacctccaggtctccctggaattcca
ggaactggaggggttggtggaccccaaggggatccagggaagcccggaccacctggagaa
aaaggacccccaggaaggtgcacagaaggtcccaggggagcccaaggacttccaggatta
aatggattggaagggcaaccgggcagaagaggtgaaacagggccaaagggagacccaggt
attccaggcttggataggtcaggctttcctggagaacctggaccaccaggaatgccaggt
catcgaggtgcaatgggaccacctggtcaaaaaggatatccaggaaatccaggattttta
ggaccaccaggtgaaaaaggaatgatggggatgatgggctatccaggagatgctggccct
cctgggccccctgggaacccaggcgccccaggacagaggggtagctttggaattccagga
gcaaagggtgagaaaggacccccaggaaccaagggggaagaaggagataaaggacctcgg
ggaccttctcagatatccactttgctgggggacaaaggagaaccaggcctcaaagggttt
gccggaaagcctggtgaaaaaggaaacagaggcattccagggttaccaggtttaaaagga
ccggaaggaccacctggaccaccaggtccaccaggccccagaggggattcaggcagcgtt
gggaatcctggacaaccaggaccgcgtggtgggccaggaagcatggggaacatgggggtg
ccaggtcctaaaggacacaggggagctttgggactaccaggtttaatcggaagaccgggt
ctcccgggtgttcccggtctccaaggagataagggagagccaggttattcggcaagtaca
aggccaggaccaccgggaccaaagggagatccaggattgccaggtgacatgggaaggaaa
ggagaaagagggctacctggcacccctggacattcggggcctgctggaactgagggagcc
cctggaaatcccgggagtcctggccacccaggaaagccaggccctgatggtgatttgggg
ttaaaaggcatcaaaggcttccctggttttccaggagtcaaaggccctccaggacctcca
ggatacccaggacctcctggaccaatgggtatgagaggcagccagggacgtgatggaatt
cctggtccagctggagaaaagggagaaacaggtttgctgggggcacctccaggcccaaga
gggagccccggttttccaggagccaaaggagacaggggcgccccgggcttacccggcctc
ccgggcaggaaaggggtagtgggagacaccggcccgcggggacccactggcataatggga
ctcccagggccaccaggttttcctggcgcaatcatccctggccagaaaggaaatcgaggc
ccacctggcttcagaggaaacccaggtgagcccggtcctccgggacctccagggagccac
gtaagaggcatcaaaggagacaagggactcatgggcgagcctggccccaggggtctgcct
ggaactataggagctgaagggccactgggtccaccgggagcaccaggaagcccaggtctt
ccagggctcagaggtgatcctggattccatggatttccaggtgtgaaaggggagaagggc
aatccgggatttctgggaccagctggacctccagggcaaattgggcccaaaggaccaccc
ggtgtacgtggagaccctggcacagttaagatcatctcccttccaggaagcccaggacca
cctggccgtgctggaggaccagggatgcaaggagaacccgggccaccggggccaccggga
atcctaggaccctgtgggccgagaggtaagccaggcaaggatggaagaccaggaactcct
gggccaattggagaaaaaggcaacaaaggttgtaaaggagagaaaggaccacctggatct
gatggactgccaggcttgaaggggaaacctggacacattggacctcctgcaactgggcca
atgaggagaggcttcatcttcaccaggcacagtcagacgacagtgattccctcctgtcca
gaagggacagagccgctctatagtggattttctcttctttttgtacaaggaaatgaacaa
gcccatggacaagacctgggaactctcggcagctgtctgcagcgatttaccacaatgcca
ttcttgttctgtaacatcaatgatgtatgtaattttgcatctcgaaatgattattcatac
tggctgtcaacaccagctccgatgccaatggacatggctccaattactggcagggccctg
gagccttatattagcagatgcactgtctgtgaaggtcctacaaatgccatagccattcac
agccaaaccaccgccattccctcctgtcccaatggctggatttctctctggaaaggattt
tcgtttatcatgttcacaagtgcaggttctgagggtgctgggcaagctctggcctcccct
ggctcctgcctggaagaattccgagccagtccattcatagagtgccatggaagaggaacg
tgcaactactattcaaattcctacagtttctggttggcttcattaaacccccaaagaatg
ttcagaaaacctattccgtcaactgtgaaagctggggagttagaaaagataataagtcgc
tgtcgggtgtgcatgaagagaagacaatga
DBGET
integrated database retrieval system
