Mustela lutreola (European mink): 131828685
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Entry
131828685 CDS
T09578
Symbol
SYNPO2
Name
(RefSeq) synaptopodin-2 isoform X1
KO
K24066
synaptopodin-2
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04820
Cytoskeleton in muscle cells
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09140 Cellular Processes
09142 Cell motility
04820 Cytoskeleton in muscle cells
131828685 (SYNPO2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04990 Domain-containing proteins not elsewhere classified [BR:
mlk04990
]
131828685 (SYNPO2)
Domain-containing proteins not elsewhere classified [BR:
mlk04990
]
PDZ domain-containing proteins
Other PDZ domain-containing proteins
131828685 (SYNPO2)
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Gene cluster
GFIT
Motif
Pfam:
PDZ
Calsarcin
PDZ_6
PDZ_2
Motif
Other DBs
NCBI-GeneID:
131828685
NCBI-ProteinID:
XP_059025541
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Position
1:complement(91073391..91250615)
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AA seq
1263 aa
AA seq
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MGTGDFICISMTGGAPWGFRLQGGKEQKQPLQVAKIRSQSKASGSGLCEGDEVISINGNP
CADLTYPQVIKLMESIRDSLQMLIKRPSSGVNESSISETENKTPEHLTHEGPVESTILQI
QPATKNQNRELYVASVRSGAPLAGDQGSGPGFSGSIQEETGLSYHVAPHMPDSQTGHLAE
EIILREKPEVGQPGPVVELQLSLSQERHKVTNVPVVALLGAEKSKSPDPDPHVQHCGIVH
INSVPTREKGEPSLRSSKIIQLSSGKELKVTRGCEAGDVGLPQVEVILDCLDRQKTEGCR
LQAGKGCVDSPVEGGQSEAPPSLVSFAVSSEGTEQGEDPRSERDHSRPHKHRARHARLRR
SESLSEKQVKEAKSKCKSIALLLTDAPNPNSKGVLMFKKRRRRAKKYTLVSYGTGELERE
ADEEEEGDREDTCEVAFLGTSESEVDEELSSDVDDSAQVVNFDWDSGLVDIEKKLNRGDK
MEMLPDTSGKGALMFAKRRERMDQIAAQKEEERVGGMPGREPEAAQTDGLRTVASYQRKE
EESVRTQSSVSRSYIEVSHGHGHVPQQNGFSGACETADAPRMIPMNRTAKPFPGSANQLA
TPFSPTRNVASPMADFPAPPPYSAVTPPPEAFSRAMSSPPAGPAQPPPWPQPAPWAQPAF
QDASERIASRDERIAVPAKRTGILQEAKRRSTTKPMFTFKEPKVSPNPELLSLLQNSEGK
KGTGAGGDSGPEEDYLSLGAEACNFMQSSSAKHKTPPPVAPKPAVKSSPSQPVTPVSPVW
SPGAAPTQPPAFPASSPSQGTVVSSIKIAQPSYAPARPASALTLAGPFRGPQAAVASPNY
TPKPAAPTPPVNAAHAAAAGPSNELPGMSGKGAQLFAKRQSRMEKYVVDSDTVQAHAARA
QSPTPSLPAGWKYSSNVRAPPPVAYNPIHSPSYPLAALKSQPSAPQASKTSKKKGKKPLN
ALDVMKHQPYQLNASLFTFQPPDAKDGLPQKSSAKVSPVPGMKQALPPRPLNPGSPTTAQ
ASSVYSAPAYSSQPAFFAEAASPISASPVPVGIPASPKQESASASYFVAPRPKFSAKKSG
VPVQIGHSLSLPGRPAPPTISTTSPWVFQPAYNYSSKPSDELEKANKRLTPWEAATKSPL
GLVDDAFKPRNIQESIVANVVSAARRKVLPGCSEDWNERLSYVPQAQKANVSSFARQEYN
VASLPNNNMSTNSQYGSQLPYAYYRQPSRNDSEIMSMETRSDYCLSTADYNYNPHPRGWR
RQT
NT seq
3792 nt
NT seq
+upstream
nt +downstream
nt
atgggcacgggggattttatctgcatttctatgaccggaggggctccctgggggttcaga
ctgcaaggtggcaaggagcagaagcagcccttacaagtggctaagatccgaagccaaagc
aaagcctctgggtctgggctctgtgagggagatgaagtcatctccatcaatggcaacccc
tgtgcggacctcacctacccccaagtcatcaagctcatggagagcataagggactctctc
caaatgcttatcaaaagaccatccagtggagtaaatgagagttccatctctgaaacggaa
aacaaaacccctgagcatctcacccatgaggggcccgtggaaagtaccatcctgcaaatt
caaccagccacaaagaaccagaacagagagctgtacgttgcctcggtcaggagtggggct
cctctagctggggaccaagggagtggtcctggtttttctgggagcatacaagaagaaaca
ggcctgagctaccatgtcgctccccatatgcctgactcccaaacaggacacttagcagag
gagatcatcttaagggagaagccagaagtcgggcagccaggccctgtggttgaactacaa
ctgtccctttcacaagagagacacaaggtcacgaatgtccccgtggtggctctcctggga
gctgaaaaatccaagtctcctgacccagatcctcatgtacaacactgcggaattgtccac
ataaattcagtccccacgagggagaaaggggagccttctctgaggtccagcaagataatc
cagctctccagtggcaaagagttaaaagtgacccggggatgtgaagcaggagacgtgggg
ctgccccaagtggaagtgatactcgactgcttggacaggcagaagacggaagggtgcagg
cttcaggcaggaaaggggtgtgtggattctccagtggaaggagggcagtcagaagcacct
ccttctctggtatcctttgcagtctcatcagaaggcacagagcagggagaagatccacgc
tcggaaagggatcacagcagacctcacaagcaccgagcgcgccacgcacggctcaggagg
agtgaaagcctatcagaaaagcaggtgaaagaagcgaaatctaaatgcaaaagcattgcg
ctccttcttacagacgcccccaaccccaactccaagggggtgttgatgtttaagaagcgc
cgtaggcgggccaagaagtacaccctagtcagctacggcactggcgaacttgagcgcgag
gccgacgaggaggaagaaggggacagagaagatacttgcgaagtagcatttctgggcacg
agcgaatcggaggtggatgaagagttatcgtctgacgttgacgacagcgcacaagtggtg
aactttgactgggattcgggactcgtggacatcgaaaagaagctgaacagaggggacaag
atggagatgttgccggacacctcaggcaagggcgccctcatgtttgccaagaggagggag
cgaatggatcagatcgcggcccaaaaagaggaggagagggtggggggaatgcccggcaga
gaacccgaagctgcgcagacggacggcctgagaaccgtggcttcctaccaaaggaaggag
gaagaatcggtccgaacgcagagctccgtgagcagaagctacatcgaggtgagccacggt
catggccacgtgccccaacagaacggcttcagtggggcgtgtgaaaccgcagacgcaccg
aggatgattcctatgaacagaacagccaaacccttcccggggtctgcgaaccagctggcg
acccccttctccccaacccggaacgtggcaagtcccatggcggacttcccggcgcctccg
ccctattccgcggtcacgcctccgcctgaagccttctccagagccatgtcaagtccccca
gcgggccccgcgcagcctcctccgtggccccagcccgccccgtgggcccagccggccttc
caagacgcctcggagcgcatagcttcccgggatgaaaggatcgcggtgccggccaagaga
acggggatactgcaggaggccaaaaggagaagcacgacgaagcccatgttcaccttcaaa
gagcccaaagtaagcccaaatcccgaactcttgtcccttcttcaaaattcggagggcaaa
aagggcacgggagctggaggcgattccggacccgaagaagactacctcagtttaggggcc
gaggcctgtaatttcatgcagagctcctctgcgaaacacaagactccgcctccggtggct
ccgaagccggcagtcaagtcctcgccctcccaaccggtaactccagtctctccggtctgg
tccccaggagcggctccaacccaacctcctgccttccccgcgtccagcccgtcgcagggc
accgttgtctcctccatcaaaatagcccagccttcctacgctccggctcggcccgcgagt
gctctgaccctggccggtcccttcagaggaccacaagcagcggtagccagtcccaactac
acacccaagccagcggctcccacaccaccagtaaacgctgctcacgctgctgcagcggga
ccatctaatgagcttccaggaatgagtgggaaaggagcccagctctttgctaagaggcag
tcgaggatggagaagtacgtggtggattcagacacggtgcaggcccatgccgctcgcgcc
cagtctcccacaccgtctctaccggccggctggaagtactcctccaacgtccgagcccct
cctcctgtggcctacaatcctatccactccccctcctaccctctggccgctctcaagtct
cagccatcagccccacaggcgtccaagacaagcaagaaaaagggcaaaaaacccctcaat
gctttggacgtcatgaagcaccaaccgtatcagctaaacgcatccttgtttactttccaa
cctccagatgcgaaggatggcctcccccaaaagtcatccgccaaggtcagcccggtgccg
ggcatgaagcaagctctccctccccggcccttgaaccctggctcgcccactactgcgcag
gcgtcttctgtgtactcggcgccggcctacagctctcagcccgccttctttgcagaggca
gcctcacccatcagcgcgtccccagtgcccgtgggcattcccgcctccccgaagcaagaa
tcagcctctgcgtcttactttgtggcgccgaggccgaagttctcagccaagaaaagtggt
gtcccagttcagattggacactccctttctcttcctggaagaccagccccacccactatc
tccacaacatctccttgggtattccagcctgcttataactactctagcaaaccaagtgat
gagctagagaaggcaaacaagagactaactccttgggaagcagcaacgaagtctcctctg
ggtctagtggatgatgcgtttaaacccagaaacatccaggaatccattgtggcaaatgtg
gtctcagcagctaggaggaaggtgcttccagggtgctcagaggattggaatgagagactg
tcctatgttcctcaggcccagaaggccaatgtgagctcatttgcaaggcaagagtataat
gttgcatctttacctaataataatatgtctaccaactcccagtatggttcacagttgcca
tacgcatattataggcagccttccagaaatgattctgaaataatgtccatggaaactagg
tccgattactgtctttcaacagctgattacaactacaacccacacccaagaggatggaga
cgccaaacatga
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