Mustela lutreola (European mink): 131829390
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Entry
131829390 CDS
T09578
Symbol
COL1A2
Name
(RefSeq) collagen alpha-2(I) chain
KO
K06236
collagen type I alpha
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04151
PI3K-Akt signaling pathway
mlk04510
Focal adhesion
mlk04512
ECM-receptor interaction
mlk04611
Platelet activation
mlk04820
Cytoskeleton in muscle cells
mlk04926
Relaxin signaling pathway
mlk04933
AGE-RAGE signaling pathway in diabetic complications
mlk04974
Protein digestion and absorption
mlk05146
Amoebiasis
mlk05165
Human papillomavirus infection
mlk05205
Proteoglycans in cancer
mlk05415
Diabetic cardiomyopathy
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
131829390 (COL1A2)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131829390 (COL1A2)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131829390 (COL1A2)
09142 Cell motility
04820 Cytoskeleton in muscle cells
131829390 (COL1A2)
09150 Organismal Systems
09151 Immune system
04611 Platelet activation
131829390 (COL1A2)
09152 Endocrine system
04926 Relaxin signaling pathway
131829390 (COL1A2)
09154 Digestive system
04974 Protein digestion and absorption
131829390 (COL1A2)
09160 Human Diseases
09161 Cancer: overview
05205 Proteoglycans in cancer
131829390 (COL1A2)
09172 Infectious disease: viral
05165 Human papillomavirus infection
131829390 (COL1A2)
09174 Infectious disease: parasitic
05146 Amoebiasis
131829390 (COL1A2)
09166 Cardiovascular disease
05415 Diabetic cardiomyopathy
131829390 (COL1A2)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
131829390 (COL1A2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mlk00536
]
131829390 (COL1A2)
Glycosaminoglycan binding proteins [BR:
mlk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131829390 (COL1A2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
131829390
NCBI-ProteinID:
XP_059027130
LinkDB
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Position
4:132812117..132847798
Genome browser
AA seq
1367 aa
AA seq
DB search
MLSFVDTRTLLLLAVTSCLATCQSLQEVTARKGPVGDRGPRGERGPPGPPGRDGDDGIPG
PPGPPGPPGPPGLGGIFAAQYDPGKGVGLGPGPMGLMGPRGPPGASGAPGPQGFQGPAGE
PGEPGQTGPAGARGPPGPPGKAGEDGHPGKPGRPGERGVVGPQGARGFPGTPGLPGFKGI
RGHNGLDGLKGQPGAPGVKGEPGAPGENGTPGQTGARGLPGERGRVGAPGPAGARGSDGS
VGPVGPAGPIGSAGPPGFPGAPGPKGELGPVGNPGPAGPAGPRGEVGLPGVSGPVGPPGN
PGANGLTGAKGAAGLPGVAGAPGLPGPRGIPGPVGAAGATGARGLVGEPGPAGSKGESGN
KGEPGSAGPQGPPGPSGEEGKRGPNGEAGSAGPSGPPGLRGSPGSRGLPGADGRAGVMGP
PGPRGATGPAGVRGPNGDSGRPGEPGLMGPRGFPGAPGNIGPAGKEGPMGLPGIDGRPGP
IGPAGARGEPGNIGFPGPKGPTGDPGKPGEKGHAGLAGARGAPGPDGNNGAQGPPGPQGV
QGGKGEQGPAGPPGFQGLPGPAGTAGEVGKPGERGLPGEFGLPGPAGPRGERGPPGESGA
AGPSGPIGSRGPSGPPGPDGNKGEPGVLGAPGTAGPSGPGGLPGERGAAGVPGGKGEKGE
TGLRGEVGNPGRDGARGAPGAVGAPGPAGATGDRGEAGPAGPAGPAGPRGSPGERGEVGP
AGPNGFAGPAGAAGQPGAKGERGTKGPKGENGPVGPTGPVGSAGPSGPNGPPGPAGSRGD
GGPPGATGFPGAAGRTGPPGPSGITGPPGPPGAAGKEGLRGPRGDQGPVGRTGETGAHGP
PGFAGEKGPSGEPGTAGPPGTPGPQGLLGAPGILGLPGSRGERGLPGVSGSVGEPGPLGI
AGPPGARGPPGAVGAPGVNGAPGEAGRDGNPGNDGPPGRDGQPGHKGERGYPGNIGPVGA
VGAPGPHGPVGPTGKHGNRGEPGPAGSVGPVGAAGPRGPSGPQGVRGDKGEPGDKGPRGL
PGLKGHNGLQGLPGLAGQHGDQGAPGSVGPAGPRGPAGPSGPAGKDGRTGHPGTVGPAGI
RGSQGSQGPAGPPGPPGPPGPPGPSGGGYDFGYEGDFYRADQPRSPPSLRPKDYEVDATL
KSLNNQIETLLTPEGSRKNPARTCRDLRLSHPEWSSGYYWIDPNQGCTMDAIKVYCDFST
GETCIQAQPENIPVKNWYRNSKVRKHTWLGETINGGTQFEYNTEGVTTKEMATQLAFMRL
LANHASQNITYHCKNSIAYMDAETGDLKKAVVLQGSNDVELVAQGNSRFTYTVLVDGCSK
KTNEWGKTIFEYKTNKPSRLPILDIAPLDIGDADQEFRVDVGPVCFK
NT seq
4104 nt
NT seq
+upstream
nt +downstream
nt
atgctcagctttgtggatacgcggactttgttgctgcttgcagtaacgtcgtgcctagca
acatgccaatctttacaagaggtaactgcaagaaagggcccagttggagatagaggacca
cgtggagaaaggggtccaccaggcccaccaggcagagatggtgacgatggtatcccaggc
cctcctggtccacctggacctcctgggccccctggtcttggcgggatctttgcggctcag
tatgatcctggaaaaggagttggccttggacctggaccaatgggcttgatgggacctcga
gggccacctggtgcatctggcgctcctggcccccaaggtttccaaggacctgctggtgag
cccggtgaacctggtcaaactggtcctgcgggtgctcgaggtccacctgggcctcctggc
aaggctggggaggatggtcaccctggaaaacctggacgacctggtgagagaggagttgtt
ggaccacagggtgctcgtggtttccctgggacccctggacttcctggcttcaagggcatt
cggggacacaatggtctggatggattgaagggacagcccggtgctccaggtgtgaagggt
gaacccggtgcccctggtgaaaatggaacaccaggtcaaacaggagcccgtgggcttcct
ggtgagagaggacgtgtcggtgcccctggtccagctggtgcccgtggaagtgatggaagt
gtgggtcctgtgggtcctgctggtcctattgggtctgctggccctccaggcttccctggt
gctcctggccccaagggtgaactcggaccagttggtaaccctggtcctgctggtcccgcg
ggtccccgtggtgaagtgggtcttccaggtgtctccggccccgttggacctcctggcaac
cctggagccaatggcctgactggtgctaaaggagctgctggcctgcctggtgttgctggc
gctcccggtctccctggaccccgtggaattcccggccctgttggtgctgctggtgctact
ggagccaggggactagtgggtgaacctggtccagctggttccaaaggagagagtggcaac
aagggtgaacctggttctgctgggccccaaggtccccctggtcccagtggtgaagaagga
aagagaggccccaatggtgaagctggatccgctggcccctctggaccccctgggctgaga
ggaagtcctggttcccgtggtcttcctggagctgatggcagagctggtgtcatgggtcct
cccggccctcgtggtgcaactggccctgctggtgtccgaggtcccaatggagattctggt
cgccctggagagcctggcctcatgggaccccgaggttttcctggtgcccctggaaatatt
ggcccagctggtaaagaaggtcccatgggcctccctggtattgatggcaggccgggaccg
atcggcccagctggagcaagaggagagcctggcaacatcggattccctggacccaaaggc
cccaccggtgatcctggcaaacccggtgagaaaggtcacgctggccttgctggtgcacgg
ggggctccaggtcctgatggaaacaatggtgctcaggggcctcctgggccacaaggtgtc
caaggtggaaaaggtgaacaaggtcccgctggtcctccaggcttccagggtctgcctggc
cccgcaggtacagctggtgaagttggcaaaccaggagaaaggggtctccctggtgaattt
ggtctccctggtcctgctggcccaagaggggagcgtggtccccctggagaaagtggtgct
gctggtccttctggtcctattggaagccgaggtccttctggacctcctgggcccgatgga
aataagggcgagcctggtgtgctgggtgctccgggcacggcgggtccgtctggtcctggc
gggctcccaggagagaggggcgctgccggcgtccccggaggcaagggagaaaagggtgaa
actggtctcagaggtgaagttggtaacccaggccgagatggtgcccgtggtgctcctggt
gctgtaggtgcccctggtcccgcgggagccactggtgaccggggtgaagccggtcctgct
ggtcctgctggtcctgctggtccccgaggcagccctggtgaacgtggtgaggtcggtccc
gctggccccaatggatttgccggtcctgctggtgctgctggtcaacctggagctaaagga
gagcgaggaaccaaagggcccaagggtgaaaacggtcctgttggtcccacaggccctgtc
ggatccgctggcccctctggtccaaatggtccccctggtcctgctggaagtcgtggtgat
ggtggtccccctggcgctactggcttccctggtgctgctggacggactggtcctcctggg
ccctctggtatcactggccctcctggtccccctggtgctgctggtaaagaaggactccgt
gggcctcggggtgaccaaggtccagtaggccgaacgggagaaaccggtgcacatggtccc
cccggctttgccggcgagaagggtccctctggagagcctggtaccgctggccctcctggc
accccaggtcctcaagggctccttggtgctcctggcattctgggtctcccaggctctcga
ggtgaacgtggtctaccaggtgtttctggatctgtgggtgaacctggacctctcggcatc
gctggtccacctggggctcgtggtccccctggggctgtgggcgcacctggagtcaacggc
gctcctggtgaagctggtcgtgatggcaaccctgggaacgatggtcccccaggccgcgac
ggtcaacctggacacaagggagagcgcggttaccctggcaacattggtcccgttggcgct
gtgggcgcacctggtcctcatggccctgtgggtcccactggcaaacatggaaaccgtggt
gaacctggtcctgctggttctgtgggtcctgtcggtgctgctggtccaagaggtcctagt
ggcccacaaggcgttcgaggtgataagggagagcctggtgacaaggggcccagaggtctt
cctggcttaaagggacacaatggactgcaaggtcttcctggtcttgctggtcaacatggc
gatcaaggtgcacctggttctgtgggtcctgccggtcctaggggccctgctggtccttcc
ggccccgctggcaaagacggccgcactggacatcctggtacagtcggacctgctggcatc
cgtggctctcaggggagccaaggtcctgctggccctcctggtccccccggtcctcctggc
cctcccggcccaagcggtggtggctatgactttggttacgaaggggacttctacagggct
gaccagcctcgctcaccaccttctctcagacccaaggattatgaagttgatgctactctg
aaatccctcaacaaccagatcgagacccttcttacccctgaaggctcaaggaagaaccca
gctcgcacatgccgtgacttgagactcagccacccagagtggagcagcggttactactgg
attgaccctaaccaaggatgcactatggatgctatcaaagtatactgtgatttctctact
ggtgaaacctgcatccaggctcaacctgaaaacatcccagtcaagaactggtacagaaat
tccaaggtcaggaagcatacctggttaggagaaactatcaatggtggtacccagtttgag
tataacactgaaggagtaaccaccaaggaaatggccactcaactcgccttcatgcgcctc
ctggccaaccatgcctctcagaacatcacctaccactgcaagaacagcattgcctacatg
gatgcggagactggcgacctgaaaaaggctgttgttctgcaaggctccaatgacgttgaa
ctggttgcccagggcaacagcaggttcacctacactgtgcttgtggacggctgctctaaa
aagacgaatgaatggggaaagacaatctttgaatacaaaacaaataagccatcccgtctg
cctatccttgatattgcacctttggacatcggtgatgccgaccaagaattcagggtggac
gttggcccagtctgtttcaaataa
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