Mustela lutreola (European mink): 131831374
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Entry
131831374 CDS
T09578
Symbol
PCDHB1
Name
(RefSeq) protocadherin beta-1
KO
K16494
protocadherin beta
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
mlk04515
]
131831374 (PCDHB1)
Cell adhesion molecules [BR:
mlk04515
]
Cadherins
Protocadherins
131831374 (PCDHB1)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cadherin
Cadherin_2
Cadherin_C_2
Cadherin_CELSR2_9th
Cadherin_4
Ly49
Motif
Other DBs
NCBI-GeneID:
131831374
NCBI-ProteinID:
XP_059029455
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All DBs
Position
5:78734890..78737423
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AA seq
818 aa
AA seq
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MAVAHRKLLQSRQVGSLLFMLCVSVGSAATIRYSVAEEMESGSFVANVAKDLGLEVGKLA
ARGARLVSEGNKLHFRLHRKTGDLFVKEKLDRESLCGKADPCVLHFEIVLVEPLQSFRVE
VRVFDINDNAPIFLNKEPLLKIPESTPLGSRFPLQSAQDLDVGLNGLQNYTLSRNAYFHL
HTRFRSHGPKYAELVLDKPLDREDQPEVNLTITAVDGGSPPKSGIAHIRVEVLDVNDHVP
QFSRLVYRAQVLENSANGSLVATVSATDLDEGSNKEITYSLAQNPEAVLQTFQVDSHTGE
VRLRGPLDFEAIETYDIDIQATDGGGLSAHSKVLVEVVDVNDNPPEVTVSSVSSPLPEDS
PLQTVVALFSIRDRDVRVGGKITCFLREDLPFAVKPTFRNSYSLVTDRGLDREEVSGYNI
TIVAMDTGPPSLFTETVIEVLIADINDNPPVFQEDSYILTVQENNSPAIFIGKVYAEDLD
LGENAQVTYTLLPPQSGDLSVFAYISINSDNGKLYALRTMDYEAIQNFQFVVKATDGGFL
SLSSHVTVRVVVLDDNDNRPMILYPLQNGTLPCNDLVPRSADAGFLVTKVVAVDGDSGQN
SWLSYHLLKATDPGLFSVQQQNGEIRTLRQISERDPMIQKLIILVQDHGQPALSTTASLN
ILLVNGFSEPYLQFRDPSKNPTRVNPSTKYLVISLAVLSFLFLLSVTVIFGIHIYQKVKY
REKFTVQEHFYDDCNFPNNLVQRGANGSLSQPCPYEMCSATGTSNSEFRFLKRFMPNFPF
PHGTGETKTEAGSRLPPDSNRNRSQGSEDHGQVPDNSM
NT seq
2457 nt
NT seq
+upstream
nt +downstream
nt
atggcggtggcgcacagaaaactcctgcagagcaggcaagtagggtctcttctctttatg
ttgtgcgtatctgtggggagtgcggccaccatccgctattcagtggcggaagagatggag
agcggttcatttgtggctaatgtggctaaggacctggggctggaggtagggaagctggct
gcgcgcggggcgcggctggtttctgaaggcaacaaactgcatttccgtctccaccgtaag
accggggatctgttcgtgaaggagaaactggatagggagtcactgtgtggcaaagctgac
ccgtgcgtcctgcactttgaaatagtcctggtggagccgctgcagtcctttcgggttgag
gtcagggtatttgatatcaatgacaatgccccgattttcctgaacaaggagccgctttta
aagattccagagagcacgcccctgggttcacgttttcctctgcagagcgcccaggatctg
gacgtgggcctcaatggtcttcaaaattacaccttgagccgcaatgcgtatttccacctg
cacacccgctttcgcagtcatgggcccaaatatgctgagctggtcttggataagcccctg
gacagagaggaccagccggaagtcaatttgacaattacggcggtggatggggggtcccca
cccaagtcgggcatcgcgcacatccgcgtggaggttctggatgtcaatgaccacgtgcct
cagttctctaggctggtgtaccgtgctcaggtactggaaaatagcgccaacggttccttg
gtggccactgtgagtgccacagacctggacgagggctccaacaaggaaatcacttattcc
ttggctcaaaatccagaagcagttctccaaacatttcaggttgactctcacactggagag
gttcgactgagggggcccctagattttgaagcaattgaaacatatgatattgacattcaa
gccaccgatggagggggcctctctgcccacagcaaagtcctggtggaagtggtggatgtt
aatgacaatcctcctgaggtgacagtttcctctgtgtccagccctctccctgaggactcc
ccactacaaactgtagtggcccttttctctattcgagaccgggatgttcgggtgggagga
aaaatcacctgtttcctcagagaagaccttccttttgcggtcaaaccgactttccggaat
tcttactcattggttactgacagaggcttggatcgggaagaggtttcaggctacaacatc
accattgttgccatggatactggaccgcccagtctgttcacagaaactgtgattgaggtg
ttaatagctgacattaatgacaatcccccagtatttcaggaagactcctacattttgact
gttcaagaaaacaacagcccagcaatttttattggcaaagtttacgctgaggatctagat
ttgggtgagaatgcccaagtaacatatactctgctgcctccacaaagtggagatttatca
gtctttgcttacatctccataaattcagacaatgggaagctctatgcgcttagaaccatg
gattatgaggccattcaaaattttcagtttgtggtaaaggcaactgatgggggcttcctc
tcactgagtagccacgttactgtcagggtggttgttctggatgacaatgacaaccgccca
atgatcttgtacccactgcagaatggcaccttaccctgcaacgacctggtgcccaggtcg
gcggatgcaggcttcctggtgaccaaggtagtggctgtggatggtgactcaggtcagaat
tcttggctttcatatcatctccttaaggccactgaccctgggttattctctgttcaacaa
caaaatggagaaatccgtacattgcggcagatatctgaaagagaccctatgattcagaaa
ctgatcattcttgttcaggatcatggccaaccagctctttccactactgcctcactcaac
atcttgctggtaaatggtttttctgaaccctatctgcaattccgggatccttccaagaat
cctacaagggtaaatccatccactaaatatttggtcatttctctggctgtgctttccttt
ctctttctcctctctgtcacggtgatctttggtatacacatctaccagaaggttaaatac
agagaaaagttcacagttcaagagcatttctatgatgactgtaatttccctaataacctg
gtacaaagaggggccaatggatcattatctcaaccatgtccctatgaaatgtgctcagcc
actggcaccagcaatagtgagtttcggtttcttaaacgctttatgcccaacttccccttc
ccgcatggcactggagagacaaaaacagaagctggctcccgtttaccaccagactctaat
aggaataggtctcaggggtcagaggaccatggccaagtacctgacaacagtatgtag
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