Mustela lutreola (European mink): 131831772
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Entry
131831772 CDS
T09578
Symbol
SYNPO
Name
(RefSeq) synaptopodin isoform X1
KO
K21112
synaptopodin
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04530
Tight junction
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09140 Cellular Processes
09144 Cellular community - eukaryotes
04530 Tight junction
131831772 (SYNPO)
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Gene cluster
GFIT
Motif
Pfam:
Calsarcin
Motif
Other DBs
NCBI-GeneID:
131831772
NCBI-ProteinID:
XP_059030032
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Position
5:42418936..42456132
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AA seq
1149 aa
AA seq
DB search
MLGPHLPPPPHGLGEDSSTPSTFRIPDGSYRCLALEAEENSGGEEGLQGEAGLMNLEEDR
VASRNGDNLTCRATQGAPDLPNALGIQPPSCSREAQGCPQHDNSASKDWDTVKAQQVVIA
TPRPSAGPRIAQKPALGLSTSLTERDLKEAKARSQQIAAQLTTPPSSNSRGVQLFNRRRQ
RVNEFTLENHSRRGQKPSQESLQAPPASPAGYASGLSLSPTSLPEPGPPRNTSSQIPDVG
VPVHSMEGCSEKANLLRHLEKVASEEEEVPLVVYLKENAALLTANGLHLSQNREAQQSPA
SPPTAEVHSPAADVNQNLSSLSGTLITPTSNSNHSLPAADINQNPPGPVTPQSPPLSSSP
QPSEAQLPPNGTVSDSKPGTLCSGGQLPEPAVEVRPSTLLIDKVSVPPTTTNTFSRQTTP
LSSSGTPAPDFMSSSLLIDLRPSAPAASAEQETSVWAATATPAKLYSEVHFTLAKPPSVV
NRTARPFGIQGSGSTSQIERSPMVERRHLGEKILTPQPPSMADRSPRPQRHMMSHSPMVE
RRSVSQRSPALERRPLGNFTPPPTYAETLSTAPPASRVRSPPSYSALYPSSDPKPSPLKG
QAVPASKTGILEESMARRGSRKSMFTFVEKPKVTPNPDLLDLVQTADEKRRQRDQGEAGV
EEEPFALGAEASNFQQESAPRDRASPAAAEEVLPEWASCLKSPRIQAKPKPKPNQNLSEA
SGKGAELYARRQSRMEKYVIESSGHTELARCPSPTMSLPSSWKYSTNAPGGFRVASRSPA
RTPPASLYHGYLPENGVLRPEPTKQPAYQLRPSLFVLSPIKEPVKASPRAASPAKPSSLD
LVPSLPKGALPVSPALPRASRSSPGLYSSPGQDGLQPTAVSPTYSSDISPVSPSRAWSPR
AKQAPRPSFSTRNAGIEAQDRRESLPTSPPWTPGASRPPSSLDGWVSPGPWEPGRGSSMS
SPPPLPPPPPMSPSWSERSVSPLRPEAEARPPSRQLQALLARNIINAARRKSASPRPAGA
ETLRPFSPPGAQAQPPRPPPPPPPRLRSPQPTRTGPTVAAVPGATFSPIPRSPLPAGPSP
CASPRSPLPATPRPFPDRRSPTDSDLSLDSEDSGAKSPGILGYNICPRGWNGSLRLKRGS
LPTEASCTT
NT seq
3450 nt
NT seq
+upstream
nt +downstream
nt
atgctgggtccccacctcccacctccaccccacggactcggcgaagacagctctaccccc
tccaccttccggatccctgatggcagctacaggtgtcttgccttggaggctgaggagaac
agcggtggcgaggagggcctgcagggagaggcagggctcatgaacttagaggaggacagg
gtggccagcaggaatggggacaacttgacctgcagagccacccaaggggcaccagacctg
cccaatgccctgggcatccagccacccagctgctccagggaagcccaagggtgtccccag
catgataacagtgccagcaaggactgggacacggtgaaggctcagcaggtggtgatagcc
accccccgccccagcgcgggacccaggattgcccagaaaccagcattgggcctgagcact
agcctcactgagagagatctgaaagaggccaaggcccgcagccagcagatcgcagcccag
ctcaccacccctcccagctccaactcccgcggcgtccagctcttcaacaggcgccggcag
agggtgaacgagttcaccttggagaaccacagccggaggggacagaagcccagccaggag
tccctccaagcgccccctgccagccccgcaggctatgcctcagggctcagcttgagtccc
acctcactgcctgaaccaggccctccaaggaacaccagcagccagatccccgacgtaggg
gtccctgttcatagcatggagggatgctcggagaaggccaatttgctgcggcacctggag
aaggtggccagcgaggaggaggaggtaccgctggtggtttatttgaaggagaatgccgcc
ctgctgacggccaatgggctgcacctgtcccagaaccgagaagcccagcagagcccagca
agcccgccgacggcggaggtccacagcccggctgcagacgtcaaccagaacctgtcctca
ctcagtggcaccctcatcacgccgacctcgaacagcaaccacagcctgccggctgcagac
atcaatcagaacccgccgggccctgtcaccccacagagcccaccgctctcaagcagccca
cagccctcggaggctcagctccctcccaatggcacagtgtccgattccaaacccggtacc
ctgtgttccggcgggcagctgccagagccggctgtggaggtgagacctagcacgctcctg
attgataaggtgtcagtgccacctaccaccaccaacaccttctccagacaaacaactccc
ctctccagctccgggaccccggccccagatttcatgtccagctccctgctcatcgattta
cggcccagtgccccagcagcgtcagcagaacaagagacgtctgtgtgggcagccacggcc
actcccgccaagctctacagtgaggtccacttcacgctggccaagcccccatcagtggtc
aacaggaccgccagacccttcgggatccagggttcaggaagcaccagccagatagagcgg
agccccatggtagagagacgacatctcggagagaagatcctgactccccagccccccagc
atggcagacaggagccctcggccacagagacacatgatgtcccatagccccatggtggaa
aggaggtctgtgtcacagcgaagcccagccttggagagacgccctttggggaacttcacc
ccacccccaacctatgctgagaccttgtccacagcccccccagcttcccgggttaggtct
cccccttcctactctgccctttaccccagctctgaccccaagccttctcctctgaagggc
caggccgttcctgccagcaagacaggcatattggaggagtcaatggcccgcaggggcagc
cggaaatccatgttcaccttcgtggagaagcccaaggtgactccgaacccggacctgctg
gatcttgtgcagacggctgatgagaagcggaggcagagggaccagggggaggcaggcgtg
gaggaggagccctttgcactgggggctgaggcctccaactttcagcaggagtcagcgccc
cgggacagagccagccctgcggcggccgaggaggtcctcccggagtgggcctcgtgcctc
aagtccccgcgcatccaggccaagccgaagcccaaacccaaccagaacctgtctgaggcc
tccgggaagggggctgagctctacgcccgccgccagtcccggatggagaagtacgtcatc
gagtcctcgggccacaccgaactggcccgctgcccttcgcccaccatgtccctgccttca
tcctggaaatattccaccaatgctcctggcggcttccgagtggcatcccggagcccagct
cggaccccgcccgcctccctctaccatggctacctgcccgagaatggggtcctgcgcccc
gagcccactaagcagccagcctaccagctgcggccctcgctcttcgtcctctcacccatc
aaggagcctgtcaaggcctcgccgagagccgcctctcctgccaagccgagctccctggac
ctggtgcccagcctccccaagggggccctcccagtgtccccagccctgcctcgggcctcc
cgctcctcaccgggcctctacagctcccccggccaggacggcctccagcccacagccgtg
agcccgacctacagcagtgatatctcccccgtgtcgccctccagggcatggtctccccgc
gccaagcaggctcccaggccctccttctccacccggaatgctgggatcgaggctcaggac
cgccgggagagcctgcccacctccccgccctggacgccgggcgcctcccggccccccagc
agcctggacggctgggtgagcccggggccgtgggaacccggccgggggagcagcatgagc
agccccccgccgctcccgccgccgccgcccatgtcgccctcgtggagcgagcgctcggta
tccccgctgcgacccgaggcagaggcgcggcctcccagccgccagctgcaggccctcctg
gcgcgaaacatcatcaacgccgcccggcgcaagagcgcctccccgcggccggcgggcgcc
gagaccctgcggcccttctcgccgcccggggcgcaggcgcagccaccgcggccgccgccg
ccgccaccgccgcgcctgcgctcgccgcagcccacccggaccggccccaccgtcgccgcc
gtccccggggccacgttctccccaatcccgcggagcccgctgcccgccgggccctcgccc
tgcgccagcccccggagcccgctgcccgcgacgccccggcctttccccgaccgccgctcg
cccacggactccgacctgtccctcgactccgaggactccggggctaagtcgcccggcatc
cttggctacaacatctgtcctcgcgggtggaacggcagcctgaggctcaagcgtggcagc
ctccccaccgaggcctcctgcaccacctaa
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