KEGG   Mustela lutreola (European mink): 131832492
Entry
131832492         CDS       T09578                                 
Symbol
CHD1
Name
(RefSeq) chromodomain-helicase-DNA-binding protein 1 isoform X1
  KO
K11367  chromodomain-helicase-DNA-binding protein 1 [EC:5.6.2.-]
Organism
mlk  Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:mlk00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:mlk03021]
    131832492 (CHD1)
   03036 Chromosome and associated proteins [BR:mlk03036]
    131832492 (CHD1)
Transcription machinery [BR:mlk03021]
 Eukaryotic type
  RNA polymerase II system
   Coactivators
    SAGA/TFTC/STAGA complex
     131832492 (CHD1)
Chromosome and associated proteins [BR:mlk03036]
 Eukaryotic type
  Histone modification proteins
   HAT complexes
    SAGA complex
     131832492 (CHD1)
    SLIK complex
     131832492 (CHD1)
SSDB
Motif
Pfam: SNF2-rel_dom HTH_CHD1_Hrp3 CDH1_2_SANT_HL1 CHD1-like_C Chromo Helicase_C DEAD
Other DBs
NCBI-GeneID: 131832492
NCBI-ProteinID: XP_059031537
LinkDB
Position
5:complement(123358113..123434055)
AA seq 1798 aa
MNGHSDEESVRNSSGESSQSDDDSGSASGSGSGSSSGSSSDGSSSQSGSSDSESGSESGS
QSESESDTSRENKVQAKPPKVDGAEFWKSSPSILAVQRSAMLKKQQQQQQQQQASSNSGT
EEDSSSSEDSDDSSNEVKRKKHKDEDWQMSGSGSPSQSGSDSESEEERDKSSCDETESDY
EPKNKVKSRKPQNRSKAKNGKKILGQKKRQIDSSEEEDDEEDYDNDKRSSRRQATVNVSY
KEDEEMKTDSDDLLEVCGEDVPQPEEEEFETIERFMDCRIGRKGATGATTTIYAVEADGD
PNAGFEKNKEPGEIQYLIKWKGWSHIHNTWETEETLKQQNVRGMKKLDNYKKKDQETKRW
LKNASPEDVEYYNCQQELTDDLHKQYQIVERIIAHSNQKSAAGYPDYYCKWQGLPYSECS
WEDGALISKKFQACIDEYFSRNQSKTTPFKDCKVLKQRPRFVALKKQPSYIGGHESLELR
DYQLNGLNWLAHSWCKGNSCILADEMGLGKTIQTISFLNYLFHEHQLYGPFLLVVPLSTL
TSWQREIQTWASQMNAVVYLGDINSRNMIRTHEWMHPQTKRLKFNILLTTYEILLKDKAF
LGGLNWAFIGVDEAHRLKNDDSLLYKTLIDFKSNHRLLITGTPLQNSLKELWSLLHFIMP
EKFSSWEDFEEEHGKGREYGYASLHKELEPFLLRRVKKDVEKSLPAKVEQILRMEMSALQ
KQYYKWILTRNYKALSKGSKGSTSGFLNIMMELKKCCNHCYLIKPPDNNEFYNKQEALQH
LIRSSGKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGEL
RKQALDHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIG
QKKQVNIYRLVTKGSVEEDILERAKKKMVLDHLVIQRMDTTGKTVLHTGSAPSSSTPFNK
EELSAILKFGAEELFKEPEGEEQEPQEMDIDEILKRAETHENEPGPLTVGDELLSQFKVA
NFSNMDEDDIELEPERNSKNWEEIIPEDQRRRLEEEERQKELEEIYMLPRMRNCAKQISF
NGSEGRRSRSRRYSGSDSDSISERKRPKKRGRPRTIPRENIKGFSDAEIRRFIKSYKKFG
GPLERLDAIARDAELVDKSETDLRRLGELVHNGCIKALKDNSSGTERTGGRLGKVKGPTF
RISGVQVNAKLVISHEEELIPLHKSIPSDPEERKQYTIPCHTKAAHFDIDWGKEDDSNLL
IGIYEYGYGSWEMIKMDPDLSLTHKILPDDPDKKPQAKQLQTRADYLIKLLSRDLAKKEA
QRLSGAGGSKRRKARAKKNKAMKSIKVKEEIKSDSSPLPSEKSDEDDEKDEITSVKHPNK
KIKTERDSEERPEPDVFIKKESEEKREAKEKENKRELKRELKEKEDKKDIKEKDFKEKRE
NKVKEAIQKEKDIKEEKLSESKSDSKERSKKSSVSDAPVHITAGGEPVPISEESEELDQK
TFSICKERMRPVKAALKQLDRPEKGLSEREQLEHTRQCLIKIGDHITECLKEYANPEQIK
QWRKNLWIFVSKFTEFDARKLHKLYKHAIKKRQESQQNNDQNSNLNAQVIRNPDVERLKE
NTNHDDSSRDSYSSDRHLSQYHDHHKDRHQGDSYKKSDSRKRPYSSFSNGKDHRDWDHYK
QESRYYSDREKHRKLDDHRSRDHRSNLEGSLKDRSHSDHRSHSDHRLHSDHRASSEYTHH
KSSRDYRYHSDWQMDHRASSSGPRSPLDQRSSYGSRSPFEHSVEHKSTPEHTWSSRKT
NT seq 5397 nt   +upstreamnt  +downstreamnt
atgaatggacacagtgatgaagaaagtgttagaaacagtagtggagaatcaagccagtcg
gatgatgattctgggtcagcttcgggctcaggatctggttcaagttctggaagcagtagt
gatggaagcagtagccagtcaggtagcagtgactctgaatccggatctgaatcgggcagt
cagtcagagtctgaatcagacacttcccgagaaaacaaagtccaagcaaaaccaccgaaa
gttgatggagctgagttttggaaatctagccctagtatactggccgtgcagagatctgca
atgctcaagaagcagcagcagcagcagcagcagcagcaggcttcatctaatagtggaaca
gaggaggattcctccagcagtgaagattctgatgactcatcgaatgaggtcaaaaggaaa
aaacataaagatgaagactggcaaatgtctgggtcaggatctccatctcagtctggttca
gattcagaatctgaagaagaaagagataaaagcagttgtgatgaaacagaatctgattat
gagccaaaaaacaaagttaaaagcagaaaacctcaaaatagatctaaggcaaaaaatggg
aagaaaattcttggacaaaaaaagagacagattgattcatctgaggaggaagatgatgaa
gaagattatgataatgataaaagaagttctcgtcgccaggcaactgtcaatgttagctat
aaagaagatgaagaaatgaaaacagattctgatgatctactggaggtctgtggagaggat
gttcctcaacctgaggaagaagaatttgaaacaatagaacgttttatggattgtcggatt
gggagaaaaggagctactggtgctactacaaccatctatgcagttgaagcagatggtgac
ccaaatgcaggatttgaaaaaaacaaggaaccaggcgagatccaatatttgattaaatgg
aaaggatggtcccatattcacaatacttgggagacagaagaaacccttaagcagcagaat
gttagaggaatgaaaaaattggataactataagaaaaaagatcaggaaacaaaaagatgg
ttgaaaaatgcttctccagaagatgtggaatattataattgccagcaagaacttacagat
gatctacacaaacagtatcaaattgtggaacgaataattgctcattccaatcagaagtca
gcagctggttatcccgattattactgtaaatggcagggccttccatactcagagtgcagc
tgggaggatggagctctaatttccaaaaagtttcaagcatgcatagatgagtattttagc
aggaatcaatcaaaaaccactccttttaaagattgcaaagtattaaaacaaaggccaaga
tttgtagccctaaaaaagcaaccatcctatattggaggacatgagagtttagaattaaga
gattatcaactgaatggtttaaattggcttgctcactcttggtgcaaaggaaatagttgc
atccttgctgatgaaatgggccttggaaaaacaatacagacgatctcatttctgaactat
ttgtttcatgaacatcaattatatggaccttttctgttagtggtaccactttccactctt
acttcttggcaaagggaaattcagacatgggcttctcaaatgaatgctgtggtttattta
ggtgacattaacagtagaaatatgataagaactcatgaatggatgcatccccagaccaaa
cggttaaaatttaatatacttttaacaacttatgaaattttattgaaggataaggcattc
cttggaggtctaaattgggcatttataggtgtagatgaagcacatcgattaaagaatgat
gactctcttctgtataaaactttaatagactttaagtccaatcatcgtctcctcattact
ggaactcctctacaaaactccctcaaagagctctggtctttgctacatttcattatgcca
gaaaagttttcttcctgggaagattttgaagaagaacatggaaaaggcagagaatatggt
tatgcaagcctccacaaggagcttgagccatttctgttacgcagagttaaaaaagatgtg
gaaaaatctcttcctgccaaggttgagcagattttaagaatggaaatgagtgctttacag
aaacagtattacaaatggatattaactaggaattacaaagccctaagcaaaggttccaag
ggcagtacctcaggctttttgaacattatgatggagctaaagaaatgttgtaaccattgc
tacctcattaaaccaccagataataatgaattctataataaacaggaggccttacaacac
ttaatccgtagtagcggaaaattgattcttcttgacaaactgttaattcgtctaagagaa
cgaggcaatagagttcttattttttctcaaatggtgcggatgttagatattcttgcagaa
tatttgaaatatcgtcaattcccctttcaaagattagatggatcaataaaaggggagctg
agaaaacaagctctagatcattttaatgctgaaggatcagaggatttctgctttttactt
tccacaagagctggaggcttgggaattaatttagcctccgctgacactgttgttatattt
gattctgattggaatccacaaaatgatcttcaggcacaggctagagctcatcgaattggg
cagaagaaacaggtgaatatttatcgtctagttacgaaaggatcagttgaagaggatata
cttgaaagggccaaaaagaagatggttttagatcaccttgtaattcagagaatggacaca
actgggaagacagtactgcatacaggttctgccccctcaagttctactcctttcaataaa
gaagaattatcagccattttaaagtttggcgccgaggaactttttaaggaacctgaagga
gaagagcaagagccccaggaaatggatatagatgaaatcttgaagagggctgaaactcat
gaaaacgaaccaggccctttaactgtaggagatgagttgctttcccagttcaaggttgcc
aacttttcaaatatggatgaggatgacattgagctggaaccagaaagaaattcaaagaat
tgggaagaaataattccagaagatcaaagaagacgattagaagaggaagaaagacaaaag
gaacttgaagaaatttatatgcttccaagaatgagaaactgtgcaaaacagattagtttt
aatggaagtgaagggaggcgcagtagaagtaggagatattctggatctgacagtgactcg
atctcagaaaggaaaaggccaaagaaacgtggaagaccacggactattcctcgagagaat
atcaaaggatttagtgatgcagaaattaggcggtttatcaagagttacaagaaatttggt
ggccctctggaaagattagatgcaattgctcgggatgctgaattagttgataagtcagag
acagacctccggcgattaggagaattggtgcataatggttgcattaaagctttaaaggat
aattcttcgggaacagaacgaacaggtggtagacttggaaaagtgaagggtccaacattc
cgaatatcaggtgtacaggtgaatgccaagcttgtcatctcccacgaagaagaattaata
ccattgcacaaatccattccttcagatccagaagaaagaaagcagtatactatcccatgc
cacacaaaggcagctcattttgatatagactggggcaaagaagatgattccaatttgtta
attggtatctatgaatatggatatggaagctgggaaatgattaaaatggatcctgacctc
agtttaacacacaagatccttccagatgatcctgataaaaaaccacaagcaaagcaattg
cagacacgtgcggactacctcatcaaattacttagtagagatcttgccaaaaaagaagct
cagaggctttctggtgcaggagggtcaaagaggagaaaagcaagagctaagaagaataaa
gcaatgaagtctataaaagtgaaagaagaaataaagagtgactcttcacccctgccttca
gagaagtccgatgaagatgatgaaaaggatgagatcacttctgtgaaacatccaaataaa
aaaattaaaacagaaagagacagtgaagaaagacctgagccagatgtttttataaagaag
gaatcagaagaaaagagggaagcaaaagaaaaagagaataaaagagaacttaaaagggag
ctaaaagaaaaagaggataagaaagatataaaggaaaaagattttaaagagaaaagagaa
aacaaagtaaaagaagctatacagaaagaaaaagacataaaggaagaaaagttgagtgaa
tccaagtctgatagcaaggaaagatccaagaaatcttcagtgtcagatgctccagttcat
atcaccgcaggtggtgaaccagttcccatatctgaagaatctgaagagctagatcagaag
acattcagcatttgtaaagaaaggatgaggcctgtcaaagcagctttgaaacaacttgat
aggcctgaaaaaggcctttcagaaagagaacaattggagcatactagacagtgtttaata
aaaattggagaccatatcacagaatgtctgaaagagtatgcaaatcctgaacaaatcaag
cagtggagaaaaaacctgtggatttttgtatctaagtttacggagtttgatgcaagaaaa
ttacataaattatacaaacatgctattaaaaaacggcaggaatctcagcaaaataatgac
cagaacagcaacttgaatgctcaagtgattagaaatccagatgtggaaagattaaaagag
aatacaaatcacgatgatagcagcagggacagttattcatctgatagacatttatctcag
tatcatgatcatcataaagaccgacatcagggagattcttataaaaagagtgactctagg
aaaagaccctattcttcttttagtaatggtaaagatcatcgtgactgggatcattacaag
caagaaagcaggtattacagtgatagagagaaacacagaaaactggatgatcacaggagt
agagatcacaggtcaaatttggaaggaagtttaaaggatagatctcattctgatcatcgt
tctcattcagatcatcggttacattcagaccatcgggcaagttctgaatatacacaccat
aaatcttccagggattataggtatcattcagattggcaaatggaccacagagcttccagt
agtggccccagatcacctttagatcagagatcttcttatggctccagatctccatttgaa
cactcagttgaacacaaaagtacacccgagcatacctggagtagtcggaaaacataa

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