| Entry |
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| Symbol |
SCAF8
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| Name |
(RefSeq) SR-related and CTD-associated factor 8 isoform X1
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| KO |
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| Organism |
mlk Mustela lutreola (European mink)
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| Brite |
KEGG Orthology (KO) [BR:mlk00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:mlk03021]
131833434 (SCAF8)
03041 Spliceosome [BR:mlk03041]
131833434 (SCAF8)
Transcription machinery [BR:mlk03021]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription termination factor
131833434 (SCAF8)
Spliceosome [BR:mlk03041]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA binding proteins (RBPs)
131833434 (SCAF8)
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
6:complement(12100329..12325969)
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| AA seq |
1291 aa
MEAVKTFNSEDCASTPACTDCFSSSMDTRSILYSLNDYKPPISKAKMTQITKAAIKAIKF
YKHVVQSVEKFIQKCKPEYKVPGLYVIDSIVRQSRHQFGQEKDVFAPRFSNNIISTFQNL
YRCPGDDKSKIVRVLNLWQKNNVFKSEIIQPLLDMAAGIPPPVVTPVLASTTAAMSNTPG
TPVTPVTPANVVQGLPDPWVSQITNTDTLAAVAQILQSPQGQQLQQLIQTLQLQQQKPQP
SILQALDAGLVVQLQALTAQLTAAAAAANTLNPLEQGVAFNKKLMDRFDFGEDSEHSEEP
KKEISASQLSHVSESVNNSIFHQIAEQLQQQNLEHLRQQLLEQQQPQKATPQDSQEGTFG
SEHSASPSQGSSQQHFLEPEANLDDSIDIQQQDMDIDEGQDGVEEEIFEQEAKKVAVRSR
SRTHSRSRSRSPRKRRSRSRSGSRKRKHRKRSRSRSRERKRKSSRSYSSERRAREREKER
QKKGLPPVRSKTLSVCSTTLWVGQVDKKATQQDLTNLFEEFGQIESINMIPPRGCAYVCM
VHRQDAFRALQKLSSGSYKIGSKVIKIAWALNKGVKTEYKQFWDVDLGVTYIPWEKVKVD
DLEGFAEGGMIDQETVNTEWETVKSSEPVKETVQTTQSPTPVEKETVVTTQAEVFPPPVA
MLQIPVAPAVPAVSLVPPAFPVSMPVPPPGFSPIPPPPFLRASFNPSQPPPGFMPPPVPP
PVVPPPTIPPVVPTSLVQPPLSMTPETVKDVGFGGLVLPGGSVASNLATSTLPAGNVFNP
PTKQGEPEEKVPHLIDHQIPSGENTRSVIPNDIPSSPAMLGGQPPNVTSNSGILGVQRPN
VSSNSEIIGIRPSNVSSSSGMIGAQPPNILNNSGILGLQPPTVSSSSGLLGVLPPNIPNN
SGLIGVQPPNVPNAAGLLGTQPPAGPQNLPPLNLSNQRMPAMPMLDIRPGLMPQTPGPRF
PLIQPGIPPQRGIPPPSVLDSPLHPPPRGPFPPGDIFSQPERPFLVPGRQSVDNVTNPEK
RIPLGNDNIQQEGDRDYRFPPIEARESISRPPPVDVREVVGRPIDPREGPGRPPLDGRDH
FGRPPVDIRENLVRPGIDHLGRRDHFGFNPEKPWGHRDFDEREHRVLPVYGGPKGLHEER
GRFRSGSYRFDPRSGPWNRGFGQEVHRDFDDRRRPWERQRDRDDRDFDFCREINGNRLGR
DRIQNTWVPPPHPRVFDFFEGATSQRKGDNVPQVNGENTERHAQPPPLPVQNDPELYEKL
TSSSEINKEKSDTVADIESEPVVESTETEGT |
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| NT seq |
3876 nt +upstreamnt +downstreamnt
atggaggctgtgaaaaccttcaatagcgaggattgtgcctctactcctgcttgtacagac
tgcttttccagcagcatggacacaagaagcatattgtattccctgaacgactacaaacca
cccatttctaaagcgaaaatgacccaaattactaaggcagccatcaaagctattaagttc
tataaacatgtggtacagagcgttgagaaattcattcagaaatgtaaaccagaatacaag
gtacctggactttatgttattgactccattgtacgacaatctcgacatcagtttggtcaa
gaaaaggatgtgtttgcacccagatttagtaataacatcattagcactttccagaattta
tatcgttgccctggggatgacaagagtaaaatagtgagagtattaaacttatggcagaag
aataatgtgtttaagagtgagattattcagcctcttttggacatggcagcagggattcct
cccccagttgtcacacctgttttggccagtactactgctgctatgagcaacaccccagga
actcctgtgacgcctgttactccagccaatgtggtccaaggtctgccagatccgtgggtg
tctcagataacaaacacagatacacttgcagcagtagctcagatcttacaaagtcctcaa
ggccaacagcttcagcagttaatacaaactttacagctacagcagcagaagcctcagcct
tcgattctgcaggccctggatgctggtcttgttgtgcagttgcaggctctcacagcacag
ctcacggctgcagctgccgcagccaacaccctgaaccccttggaacagggagtggctttc
aacaagaagttgatggataggtttgattttggggaagattctgagcatagtgaagaaccc
aaaaaggagatttcagcctctcaactttctcatgtttcagaatctgtgaacaattccatt
tttcatcagatagctgaacaactacagcagcaaaaccttgaacatctcagacagcagctc
ctagaacagcaacagcctcaaaaggcaacccctcaggatagtcaggagggaacatttgga
tcagagcattctgcctcaccatcacaagggagcagtcagcagcatttccttgaacctgag
gcgaatttggatgattctatagatattcagcaacaggatatggatattgatgaagggcaa
gatggagtggaagaggagatctttgaacaagaggcaaagaaagtggctgttcgctcaaga
tcaagaacacattcacgatctcgttcaagatcacccagaaaacgaaggtctcggtcacgg
tctggttctcgaaaacgtaaacacagaaagcgatcgcgctcacgctctagagaaagaaag
aggaagtcatcacgttcctactcaagtgaaaggagagcgagagaaagggagaaagaacgg
cagaagaagggattgcctccagttcgctcgaaaacattgagtgtatgtagtactactttg
tgggttggtcaggtggataagaaggcaacccagcaagatttaaccaatctgtttgaagag
tttggacaaattgaatccattaatatgattcctcccaggggctgtgcttacgtctgcatg
gttcatcgacaagatgcttttcgggctcttcagaaacttagttccggatcatataaaatt
gggtctaaggtcattaagattgcttgggctttaaacaaaggtgtaaaaacagaatataaa
caattctgggatgtggatcttggagttacatatataccatgggagaaagttaaagtggat
gacttggaaggttttgcagaaggaggcatgattgaccaggaaactgtaaatactgagtgg
gaaactgtgaaaagctcagaacctgttaaagagacggtccagacaactcagagcccaact
ccagttgaaaaagagacagtggtcacaacccaggcagaggtttttcctccacctgttgct
atgttacagattccagtagcgccagcggtgcctgcagttagtctagtcccaccagcattt
cctgtctcaatgccggttcctcctcctggattcagtccaatccctccaccaccttttctg
cgagcgagtttcaacccttcacagccacctcctggtttcatgccacctccagttccacca
cctgttgtaccaccgcccaccattccaccagtagtaccaacatctttagtgcagccgcca
ttatccatgactccagaaactgtgaaagatgttggatttggtggtcttgttttaccgggt
ggttctgttgccagcaatcttgctacttccactctgccagccggaaatgtttttaatcct
ccaactaaacaaggagagcctgaagaaaaagtacctcatcttatagaccaccagattcct
tctggcgaaaataccagatcagtgattccaaatgatattccaagtagccctgcaatgtta
ggaggacagccaccaaatgtgacaagcaattctggaattctgggagtccaaagaccaaat
gtatcgagtaattctgaaattattggaatccgaccatctaatgtttccagtagttctggg
atgattggagcccagccaccaaatattctaaataactctggaattttgggactacagcca
ccaactgtgtcaagtagttctggacttttgggagtgctccccccaaatatccctaataat
tctggacttataggagtacagccaccaaatgttccaaatgccgctggacttttgggaaca
caaccaccagctgggcctcaaaacttaccccctttaaatctctctaatcaaaggatgcct
gcaatgccaatgttagacattcgtccaggactaatgccacagacacctggacccagattc
cctttaatacagcctggaattccaccccaacggggaatccctcccccatcggtactggat
tcacctcttcatccaccaccccgtggtccttttcctccaggagatatttttagtcagcca
gaaagaccttttctagttcctggaagacaaagtgtagacaatgttactaatccagaaaaa
aggataccacttgggaatgataacattcaacaggaaggagatagagattaccggtttcct
cccattgaagccagggaaagcattagtagacctcccccagtggatgttagggaagttgtt
ggacggcctatagatccaagagaaggtcctggaaggcctccattagatggtagggatcat
tttggaagacctccagtcgatattagagagaatcttgtaaggccaggcatagatcatctt
ggtcgaagagaccactttggctttaatccagagaagccctgggggcatagagattttgat
gagagagaacatcgggttctacctgtctatggtggtccaaaaggcttacatgaagaaaga
ggtagatttcggtctggaagctatcgatttgatcctagaagtggtccttggaacagagga
tttggacaagaagttcacagagattttgatgaccgcagaagaccctgggagaggcaaagg
gatagggatgacagagattttgatttctgcagagaaattaatggaaaccgtcttggacga
gatagaattcagaacacctgggtcccccctcctcatcctcgggtttttgatttttttgaa
ggggccacttctcaacgaaaaggtgataacgtgcctcaggttaatggtgaaaatactgag
agacatgcccagccaccacctttaccagtacagaatgaccctgaactttatgaaaaactg
acatcttcaagtgaaataaacaaggagaagagtgacacagttgctgatatagaaagtgaa
ccagtggtagaaagcacagaaactgaggggacataa |
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