Entry |
|
Symbol |
VPS39
|
Name |
(RefSeq) vam6/Vps39-like protein
|
KO |
K20183 | Vam6/Vps39-like protein vacuolar protein sorting-associated protein 39 |
|
Organism |
mlk Mustela lutreola (European mink)
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Pathway |
|
Brite |
KEGG Orthology (KO) [BR:mlk00001]
09140 Cellular Processes
09141 Transport and catabolism
04140 Autophagy - animal
131836161 (VPS39)
04148 Efferocytosis
131836161 (VPS39)
09160 Human Diseases
09171 Infectious disease: bacterial
05132 Salmonella infection
131836161 (VPS39)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:mlk04131]
131836161 (VPS39)
Membrane trafficking [BR:mlk04131]
Endosome - Lysosome transport
Tethering complex
Hops complex
131836161 (VPS39)
|
SSDB |
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Motif |
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Other DBs |
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LinkDB |
|
Position |
7:complement(68428745..68475401)
|
AA seq |
875 aa
MHDAFEPVPILEKLPLQIDCLAAWEEWLLVGTKQGHLLLYRIRKDTGCNRFEVTLEKSNK
NFSKKIQQIHVVSQFKILVSLLENNIYVHDLLTFQQITTVSKAKGASLFTCDLQHTETGE
EVLRMCVAVKKKLQLYFWKDREFHELQGDFSVPDVPKSMAWCENSICVGFKRDYYLIRVD
GKGSIKELFPTGKQLEPLVAPLADGKVAVGQDDLTVVLNEEGICTQKCALNWTDIPVAME
HQPPYIIAVLPRYVEIRTFEPRLLVQSIELQRPRFITSGGSNIIYVASNHFVWRLIPVPM
ATQIQQLLQDKQFELALQLAEMKDDSDSEKQQQIHHIKNLYAFYLFCQKRFDESMQVFAK
LGTDPTHVMGLYPDLLPTDYRKQLQYPNPLPGLSGAELEKAHLALIDYLTQKRSQLVKKL
NDSDHQSSTSPLMEGTPTIKSKKKLLQIIDTTLLKCYLHTNVALVAPLLRLENNHCHIEE
SEHVLKKAHKYSELIILYEKKGLHEKALQVLVDQSKKANSPLKGHERTVQYLQHLGTENL
HLIFSYSVWVLRDFPEDGLKIFTEDLPEVESLPRDRVLGFLVENFKGLAIPYLEHVIHVW
EETGSRFHNCLIQLYCEKVQGLMKEYLLSFPAGKTPVPAGEEEGELGEYRRKLLMFLEIS
GYYDPGRLICDFPFDGLLEERALLLGRMGKHEQALFIYVHILKDTKMAEEYCHKHYDQNR
DGNKDVYLSLLRMYLSPPSVHCLGPIKLELLEPQANLQAALQVLELHHSKLDTTKAINLL
PANTQINDIRIFLEKVLEENAQKKRFNQVLKNLLHAEFLRVQEERILHQQVKCIITEEKV
CMVCKKKIGNSAFARYPNGVVVHYFCSKEVNPADT |
NT seq |
2628 nt +upstreamnt +downstreamnt
atgcacgacgccttcgagcccgtcccgatcctagaaaagctgcctctgcagatcgactgt
ctggctgcctgggaggaatggcttcttgttggcaccaaacaaggacatcttcttctctat
aggatccggaaggacactggttgcaacaggtttgaagtgacactagagaaatccaataaa
aacttctccaaaaagattcagcagatccatgtggtttcccagtttaagattctggtcagc
ttgttagaaaataacatttatgtccatgacctattgacatttcaacaaatcactacggtt
tcaaaggcaaagggagcctcactgttcacatgtgacctccagcacacagagaccggtgag
gaggtgctgcggatgtgtgtcgctgtgaaaaagaagctccagctctacttctggaaggac
agggaattccatgaattgcagggggactttagcgtaccagatgtgcccaagtccatggcc
tggtgtgaaaattctatctgtgtgggtttcaagagagactactacctaataagggtggat
ggaaaagggtccatcaaagagctctttccaacaggaaaacagctggagccattagttgca
cctctggcagatggaaaagtggccgtgggccaggatgatctcaccgtggtgctcaatgag
gaggggatctgcacacagaaatgtgccttgaactggacagacataccagtcgccatggag
caccagcctccctacatcattgccgttttgcctcgatatgtggagatccgaacatttgag
ccaaggcttctggtccagagcattgaacttcaaaggccccgcttcattacctcgggagga
tcaaacattatctacgtggccagcaatcattttgtttggagactcattcctgtccccatg
gcaacccaaatccaacagcttctgcaggacaagcagtttgaattggctctccagctcgcg
gaaatgaaagatgattccgacagcgaaaagcagcagcagatccatcacatcaagaacttg
tatgccttctacctcttctgccagaagcgttttgatgagtccatgcaggtctttgctaag
cttggcacagatcctacccatgtgatgggcctgtacccggacctgctgcccacagactac
aggaagcagctgcagtaccctaacccactgcctgggctctcaggggctgagttggagaag
gcacacttagctctgattgactacctgacacagaaacgaagccagttggtaaagaagctg
aatgactctgatcaccagtctagcacctccccacttatggaaggcacgcctaccatcaaa
tccaagaagaagctgttgcaaatcattgacaccaccctgctcaagtgctacctccatacg
aacgtggccctggtggcccctctgctccgcctggagaacaaccactgccacatcgaggag
agcgagcacgtgctgaagaaggcgcacaagtacagcgagctgatcatcctgtatgagaag
aaggggctccacgagaaagctctgcaggtgctggtagaccagtccaagaaagcaaactcg
cctctgaaaggccatgagaggacagtgcagtatctgcagcatcttggtactgaaaacctg
catttgattttttcctactctgtatgggtgctgcgagacttcccagaggatggcctgaag
atctttaccgaagaccttccggaggtagagtctctgccacgggaccgggtgctcggcttc
ttggtggagaattttaagggtctggctattccttatctggaacatgtcatccacgtttgg
gaggagacaggctctcggttccacaactgcctgatccagctgtactgtgagaaggtgcaa
ggtctgatgaaggaatatctcctgtccttccctgcaggcaaaactccagtccctgctgga
gaggaagagggtgagctgggagaataccgacggaaactccttatgttcttggaaatttcg
ggctactatgatccaggccggctcatctgtgactttccttttgatggtctcttagaagag
cgggcactgctgctgggccgcatggggaagcacgagcaagcgctcttcatctacgtgcac
atcctgaaggacacaaagatggccgaggagtactgccacaagcattatgaccaaaacaga
gatggcaacaaagatgtgtatctgtccctgctccggatgtacctgtcgccccccagtgtg
cactgcctgggaccaatcaagctggaattgctggagccacaggccaacctccaggcagcc
ctgcaagtcctcgagctgcaccacagcaagctggacaccaccaaggccatcaaccttcta
ccagcaaacactcagattaacgatatacgcatctttctggaaaaggtcttagaagaaaat
gcacaaaaaaaacggttcaatcaagtgctcaagaaccttctccatgcagaatttctgagg
gtccaggaagagcggattttacatcagcaggtgaagtgcatcatcacggaggagaaggtc
tgcatggtgtgtaagaagaagattgggaatagtgcatttgcaagataccccaacggagtg
gtcgtgcactacttctgttccaaagaggtcaacccggctgacacctga |