| Entry |
|
| Symbol |
PNN
|
| Name |
|
| KO |
|
| Organism |
mlk Mustela lutreola (European mink)
|
| Pathway |
|
| Brite |
KEGG Orthology (KO) [BR:mlk00001]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
131836501 (PNN)
03015 mRNA surveillance pathway
131836501 (PNN)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:mlk03019]
131836501 (PNN)
03041 Spliceosome [BR:mlk03041]
131836501 (PNN)
Messenger RNA biogenesis [BR:mlk03019]
Eukaryotic type
mRNA surveillance and transport factors
Transport factors
EJC complex
131836501 (PNN)
Spliceosome [BR:mlk03041]
Complex C
Other components
EJC/TREX
131836501 (PNN)
|
| SSDB |
|
| Motif |
|
| Other DBs |
|
| LinkDB |
|
| Position |
7:94754384..94761521
|
| AA seq |
749 aa
MAVAVRTLQEQLEKAKESLKNVDENIRKLTGRDPNDVRPIQARLLALSGPGGGRGRGSLL
LRRGFSDSGGGPPAKQRDLEGAVSRLGGERRTRRESRQESDPEDDDVKKPALQSSVVATS
KERTRRDLIQDQNMDEKGKQRNRRIFGLLMGTLQKFKQESTVATERQKRRQEIEQKLEVQ
AEEERKQVENERRELFEERRAKQTELRLLEQKVELAQLQEEWNEHNAKIIKYIRTKTKPH
LFYIPGRMCPATQKLIEESQRKMNALFEGRRIEFAEQINKMEARPRRQSMKEKEHQVVRN
EEQKAEQEEGKVAQREEELEETGNQHNDVEIEEAGEEEEKEIGIVHSDAEKEQEEEEQKQ
EMEVKMEEETEVRESEKQQDSQPEEVMDVLEMVESVKNVIAEQEVMETNQVESVEPSENE
TSKELEPEMEFEVEPDKECKSLSPVKENASALEMENEPEEKEEKESEPQPEPVAHLQPLP
QSQPEPQLQPEPQLQPEPQPPSQPQPQLQPPSQPQPPSQPQPQALLQAQPLSQPETLPLA
VLQPSIQVFQEQGHLLPERKEFPVESVKLTEVTVEPVLTVHSESKTKTKTRSRSRGRARN
KTSKSRSRSSSSSSSSSSSTSSSSGSSSSSGSSSSRSSSSSSSSTSGSSSRDSSSSTTSS
SESRSRSRGRGHNRDRKHRRSVDRKRRDTSGLERSHKSSKGGSSRDTKGSKDKNSRSDRK
RSISESSRSGKRSSRSERDRKSDRKDKRR |
| NT seq |
2250 nt +upstreamnt +downstreamnt
atggcggtcgcggtgagaactttgcaggagcagctagaaaaggccaaagagagcctaaag
aacgtagatgagaatattcgcaagctcaccggtcgggatccgaatgacgtgaggcccatc
caagccagattgctggccctttctggtcctggtggaggtagaggacgtggtagtttattg
ctgaggcgtggattctcagatagtggaggaggacccccagccaaacagagagaccttgaa
ggggcagtcagtaggctgggcggggagcgtcggacaaggagagaatcacgccaagaaagc
gacccagaggatgatgatgttaaaaagccagctttgcagtcttcagttgtagctacctcc
aaagaacgcacacgtagagaccttatccaggatcaaaatatggatgaaaagggaaagcaa
aggaaccgacgaatatttggcttattgatgggtactttgcagaaatttaaacaagaatcc
actgttgctactgaaaggcaaaagaggcgccaggaaattgaacaaaaacttgaagtgcag
gcagaagaagaaagaaagcaagttgaaaatgagaggagagaactgtttgaagaaagacgt
gctaaacagacagaactgcggcttttagaacagaaggttgagcttgcgcagctgcaagaa
gaatggaatgaacataatgccaagataattaaatatataagaactaagacaaagccccat
ttgttctatattcctggaagaatgtgtcccgctacccaaaaattaatagaagagtcacag
agaaaaatgaatgctttatttgaaggtagacgcatcgaatttgcagaacaaataaataaa
atggaggctaggcctagaagacaatcaatgaaggaaaaagagcatcaggtggtgcgtaat
gaagaacagaaggcggaacaagaagagggtaaggtggctcagcgagaggaagagttggag
gagacaggtaatcagcacaatgacgtagaaatagaggaagcaggagaggaagaggaaaag
gaaataggtatagttcatagtgatgcagagaaagaacaggaggaggaggaacaaaaacag
gaaatggaggtcaagatggaggaggaaactgaggtaagggaaagtgagaagcagcaggat
agtcaaccggaagaagttatggatgtgctagagatggtcgagagtgtcaaaaatgtaatt
gctgagcaggaggtaatggaaaccaatcaagtggaaagtgtagaaccttcagaaaacgaa
actagcaaagaactggagccagagatggaatttgaagttgagccagataaagaatgtaaa
tctctttctcccgtgaaagagaatgccagtgctctagaaatggaaaatgagcctgaggaa
aaagaagagaaagaatctgagccccagcctgagcctgtggctcacctccagcccctgcct
cagtctcagcctgagcctcagcttcagcctgagccgcagctgcagcctgagccacagcca
ccgtcccagccccagccccagctccagcccccgtcccagccccagcccccatcccagccc
cagccccaagcactcctccaagcccagcctctctctcaacctgagactttgccattagct
gttttacagccatcaattcaggtttttcaggagcaagggcatttactacctgagaggaag
gaatttcctgtggaatctgtaaaactcactgaggtgacagtagagccagtcttaacagta
cattcagagagcaaaaccaaaaccaaaactaggagcagaagtagagggcgagctagaaat
aaaaccagcaagagtagaagtcgcagcagtagcagtagtagttctagtagtagttccact
agtagcagcagtggaagcagttccagcagtggcagcagtagtagtcgcagtagttccagt
agcagctccagcaccagtggcagcagcagcagagacagtagcagcagcaccactagtagc
agtgagagtagaagtcggagtaggggccggggacataatagagatagaaagcacagaagg
agtgtggatcggaagcgaagggatacatcaggactagaaagaagtcacaaatcttcaaaa
ggtggtagtagtagagatacaaaaggatcaaaggataagaattcccggtccgacagaaag
aggtctatatcagagagtagtcgatcaggcaaaagatcttcaagaagtgaaagagaccga
aaatcagacaggaaagacaaaaggcgttaa |