Mustela lutreola (European mink): 131838871
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Entry
131838871 CDS
T09578
Symbol
PDZRN4
Name
(RefSeq) PDZ domain-containing RING finger protein 4 isoform X1
KO
K15682
ligand of Numb protein X 3/4 [EC:
2.3.2.27
]
Organism
mlk
Mustela lutreola (European mink)
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04121 Ubiquitin system [BR:
mlk04121
]
131838871 (PDZRN4)
Enzymes [BR:
mlk01000
]
2. Transferases
2.3 Acyltransferases
2.3.2 Aminoacyltransferases
2.3.2.27 RING-type E3 ubiquitin transferase
131838871 (PDZRN4)
Ubiquitin system [BR:
mlk04121
]
Ubiquitin ligases (E3)
Single Ring-finger type E3
Ligand of Numb proteins
131838871 (PDZRN4)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PDZ
PDZ_6
PDZ_2
zf-C3HC4_2
zf-C3HC4
zf-RING_UBOX
zf-RING_2
Sina_ZnF
zf-C3HC4_3
zf-RING_5
zf-C3HC4_4
zf-rbx1
PDZ_Tricorn
zf-RING_6
U-box
Motif
Other DBs
NCBI-GeneID:
131838871
NCBI-ProteinID:
XP_059041619
LinkDB
All DBs
Position
8:complement(72587360..72936391)
Genome browser
AA seq
1037 aa
AA seq
DB search
MGFALERFAEAVDPDFKCKLCGQVLEEPLCTPCGHVFCASCLLPWVARRRRCPLQCQPLA
PGKLCRVLPLRGLIQKLRIQCDYRARGCGRSVRLHELAAHVERCAFRPARRRRLDCVSEP
GGRRGVDVPARGGCGTAPGPGRGGGERGGPPGVRGGSGRGPPQLVLAWSRREKALRAQLW
ALRDEAQLTARRYQEKFSQYMAHVRNFARDLGGGHGRDGEHKPFTIVLERENDTLGFNII
GGRPNQNNKEETSAEGIYVSKILENGPADRADGLEIQDKIIEVNGKDLSKATHEEAVEAF
RNAKEPIVVQVLRRTPLSKPAYGTAPAVQLMDASTQTDITFEHIMALAKLRPPTPPVPDI
CPFLLSDSCHSLHPMEHEFYEDNEYLSSLPADADRAEDFEYEEVELCRVSSQEKLGLTVC
YRTDDEEDTGIYVSEVDPNSIAAKDGRIREGDRILQINGEDVQNREEAVALLSSDECKRI
VLLVARPEIQLDEGWLEDERNEFLEELNLEMLEEQHNEAMQGTANEVEQPKKQEEEEGTT
DTATSSSNNHEKDSGVGRTDESLRNDESSEQENAAEDPNSTSLKSTRELGQSQDTLGSVE
LQCNESFASGEYIDSDCLGNPDEECERFRQLLELKCKIRNHGEYDLYYSSSTIECHQGEQ
EGVEHELQLLNEELRNIELECQNIMQAHRLQKATDPYGDIWALHDGGFRNYNTSMDMPRG
KLDDIIEHPEKSDKDSSSAYNTAESCRSTPLTVDRSPDSSLPRMINLTNKKNLRSTMAAS
PSSSGQSSKESTSTKAKTIEAGCSAEGQEKISEGSKGSEQEKPSSEHIPYLSPYHSSSYR
YANIPAHARHYQSYMQLIQQKSAVEYAQSQLSLVSVCKEAQKCSEPKMEWKVKIRSDGTR
YITKRPVRDRILRERALKIKEERSGMTTDDDTMSEMKMGRYWSKEERKQHLVRAKEQRRR
REFMMRSRLECLKESPQSGSEGKKEINILELSHKKMMKKRNKKILDNWMTIQELMTHGAK
SPDGTRVHNAFLSVTTV
NT seq
3114 nt
NT seq
+upstream
nt +downstream
nt
atgggctttgccctggagcgcttcgccgaagcggtggacccggatttcaagtgcaagctg
tgcggccaggtgctggaggagcccctgtgcacgccgtgcgggcacgtcttctgcgccagc
tgcctgctgccctgggtggcgcggcggcgccggtgcccgctgcagtgccagcccctggcg
ccgggcaagctgtgccgggtgctgcctctgcgcggcctcatccagaagctgcgcatccag
tgcgactaccgcgcccgtggctgcggccgctcggtccggctccacgagctggcggcgcac
gtcgagcgctgcgccttccgccctgcccgccgccgccggctggactgcgtctcggagccg
ggcggccgccgcggcgtggacgtccccgcgcgggggggctgcggaacggcgccggggccc
ggccggggcgggggcgagcgcggggggccgccaggcgtccgcggcgggagcgggcggggg
ccgccgcagctagtcctcgcctggagtcggcgcgagaaggcgctgcgggcgcagctctgg
gcgctgcgggacgaggcgcagctcacggcccgcaggtaccaggagaagttctcccagtac
atggctcacgtccgcaacttcgccagagacctgggcggcggccacggccgggatggagaa
cataagccattcaccattgtgttagaaagagaaaatgacacattgggattcaatattata
ggaggccgaccaaatcagaataataaggaagaaacatcagcagaaggaatttatgtttca
aaaattttggaaaatggacctgctgacagagcagatggcctggagattcaggacaaaatc
attgaggtcaatgggaaggatctctcaaaagccacccatgaagaggcagtggaagctttt
cgaaatgccaaggagcccattgtggtccaggtgctaagacgaacacctctcagtaaacca
gcctatggaacggccccagcagtgcagctcatggacgctagcactcagacagacatcacc
ttcgagcacatcatggctctggcaaaacttcggccacctacccctccagtgccagacatc
tgtcctttcctgctctcagacagctgccactctcttcatccaatggagcatgagttttat
gaggacaatgagtatctttccagcttgcctgctgatgcagacagagcagaggactttgaa
tatgaggaggtcgagctgtgtcgtgttagcagtcaagagaagctgggcctgacagtctgt
taccgaacggatgatgaagaagacacgggcatttatgtcagcgaggtagatccgaatagc
attgctgccaaagacggccgaattcgagaaggggatcgaattttgcaaataaatggggaa
gatgtccagaatcgagaagaggcagtggcgttgctgtctagcgatgagtgcaagagaatc
gtgctgctcgtcgcaaggccagagattcagttggatgaaggctggttggaagatgaaagg
aatgaattcttagaggagttaaacttagagatgctggaagaacagcataatgaagcgatg
cagggcacggccaacgaggtggagcagccaaaaaaacaagaagaagaagaaggcacaaca
gacacggcaacatcgtcctccaacaaccatgagaaggacagcggggtagggcgcacggat
gaaagcttgcggaatgatgagagctcagagcaggagaacgcagccgaggatcccaacagc
acatctttgaagagcacaagagagctggggcagagccaagacactctgggaagcgttgag
cttcagtgcaacgagagcttcgcgtctggcgagtacattgactctgactgccttggcaac
ccggacgaggagtgtgaaagattccgacagctcttggagctcaaatgcaagattcgaaac
catggagagtatgacctgtattactcgagcagcacaatagaatgccatcaaggggaacaa
gagggagtggagcacgagctacagttgcttaatgaagaactaagaaacattgaactggag
tgccagaatatcatgcaggctcacaggctccagaaggcgacagacccgtacggagacatc
tgggctttgcacgatggaggattccggaattataacaccagcatggatatgccacggggg
aaactagacgacatcatcgaacacccggagaagtcggacaaggacagttctagtgcttac
aacacagcagaaagctgcagaagcaccccgctcactgtggaccgttcccctgacagctcc
cttcccagaatgatcaacctcaccaataagaaaaacctgagaagcacaatggctgccagt
ccgtcatcttccggacagagcagtaaagagtcgacctccaccaaagccaaaaccatcgaa
gcaggctgcagcgcggagggccaggagaagatttccgaaggcagcaagggctctgagcag
gagaaacccagcagcgagcacatcccttacctctctccttaccacagctcctcctacaga
tacgcaaacatcccagcccatgcccgccattatcaaagctacatgcagttaattcagcag
aagtccgcggtcgagtatgctcagagccagctgagtttagtgagcgtgtgcaaggaggct
cagaagtgttcagagcccaagatggaatggaaggtgaagatcaggagcgacgggacgcgg
tacatcaccaagaggccggtgcgagaccggattctgagggaacgtgccttaaagatcaag
gaggagcgcagcggcatgacgacggatgatgacaccatgagcgagatgaaaatgggccgc
tactggagcaaagaggagagaaagcagcacctggttcgcgccaaagagcagcgtcggcgc
cgggagttcatgatgcggagccgcttggagtgtcttaaggagagcccccagagcggcagc
gagggcaagaaggagatcaacatccttgaactgagtcacaagaagatgatgaaaaagaga
aacaagaaaattttggacaactggatgacaatccaagaactgatgacccacggggccaag
tctccggatggcacccgggtgcataatgcctttttgtcagtcaccactgtatga
DBGET
integrated database retrieval system
