Mustela lutreola (European mink): 131839774
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Entry
131839774 CDS
T09578
Symbol
COL2A1
Name
(RefSeq) collagen alpha-1(II) chain
KO
K19719
collagen type II alpha
Organism
mlk
Mustela lutreola (European mink)
Pathway
mlk04151
PI3K-Akt signaling pathway
mlk04510
Focal adhesion
mlk04512
ECM-receptor interaction
mlk04974
Protein digestion and absorption
mlk05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
mlk00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
131839774 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131839774 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131839774 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
131839774 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
131839774 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
mlk00536
]
131839774 (COL2A1)
Glycosaminoglycan binding proteins [BR:
mlk00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
131839774 (COL2A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
COLFI
Motif
Other DBs
NCBI-GeneID:
131839774
NCBI-ProteinID:
XP_059043483
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Position
8:66877395..66900220
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AA seq
1287 aa
AA seq
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MAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPMGPRGPPGPPGKPGDDGEAGKP
GKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSP
GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT
GARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPP
GPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGA
GPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGAR
GLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEK
GLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKP
GDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGASGPAGPP
GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGAN
GEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA
GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP
GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPPGPQGLAGQR
GIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSP
GADGPPGRDGAAGVKGDRGEAGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPA
GPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPS
GPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDM
SAFAGLGQREKGPDPLQYMRADQPAGDLRQHDAEVDATLKSLNNQIESLRSPEGSRKNPA
RTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPANVPKKNWWSSK
GKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYL
DEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTLIEYRSQKTSRL
PIIDIAPMDIGGPEQEFGVDIGPVCFL
NT seq
3864 nt
NT seq
+upstream
nt +downstream
nt
atggctggaggattcgatgagaaggctggtggtgcccagatgggagtgatgcaagggcca
atgggccccatgggacctcggggacctccaggccctgccggtgctcctggtcccatgggc
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaagcct
gggaaatctggtgaaagaggcccccctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagccggggctccaggtgtgaagggagagagtggttcacccggagagaatggctctcca
ggcccaatgggtccccgaggcctgcccggtgagcgaggacggactggccctgctggtgct
gcaggtgcccgaggcaacgatggccaaccaggtcccgcaggcccaccgggtcccgtgggt
cctgctggcggtcctggcttccctggtgctcccggggccaagggtgaagctggccccaca
ggtgctcgtggtcccgaaggtgctcaaggtcctcgaggtgaacctggtactcctgggtcc
cccgggccggctggtgcctccggtaaccccggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgcccctggcttccctgggccccgtgggccacct
ggtcctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaagggtgaacaaggccccaagggagaacctggccctgctggcccccaagga
gcccctggtcctgctggtgaagaaggcaaacgaggagcccgtggagagcccggtggtgct
gggcccgtcggtccccctggagagagaggcgctcctggtaaccgcggtttcccaggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggtcttgctggt
cccaaaggagccaatggtgaccctggccgtcctggagagcccggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgccctggtcctccaggtcctcagggcgctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaacggtgaacctggcaaggctggtgagaag
ggactgcccggcgctcctggtctgagaggtcttcccggcaaagatggcgagacaggtgct
gcaggaccccccggacccgccggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccccggcctcgtgggtcccaggggcgaa
agaggtttcccaggtgaacgtggctctcccggggcccagggcctccagggcgcccgcggc
ctccccggcactcccggcacggacggtcccaaaggtgcatctggcccagctggcccccct
ggggctcaaggccctccaggtctgcaagggatgcccggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccccggg
aaggatggtggacgaggcctgactggtcccattggaccccctggccccgctggtgccaat
ggtgagaagggagaagttggccctcccggtcctgcaggaaccgctggtgctcgtggtgcc
ccgggtgaacgtggagagactggaccccccgggcccgctggattcgcaggtcctcctggc
gctgatggccagccaggggccaagggcgagcaaggagaggccggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggtcctccgggagccaccggattccctgga
gctgctggccgcgtcggacccccaggctccaatggaaaccctgggccccctgggccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggccccccgggccgt
gccggtgaccctggtctccaaggtcctgctggaccccctggcgagaagggagagcccgga
gatgacggtccctctggtcctgatggtcctccaggtccccaaggtctggctggccagagg
ggtatcgttggtctacctgggcagcgcggtgagagaggattcccaggcttgcctgggcca
tcaggtgagcctggtaagcagggagctcctggtgcatctggtgaccgaggtccccctggt
cccgtgggtcctcctggcttgaccggtcccgctggtgaacccggacgagagggaagccct
ggtgctgacggcccccctggcagagatggcgcggctggagtcaagggtgatcgtggtgag
gccggtgcggtgggtgcccctggtgctcctgggccccctggctctcctggccctgctggc
ccaactggaaagcaaggagaccgaggagaagctggtgcacaaggccccatgggtcccgca
ggaccggctggagcccggggaatcccaggccctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgtggcttcaccggtctgcagggt
ctgcctggtccccccggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggtcctagaggtcctcctggccctgttggtccctctggcaaagatggtgctaatggaatc
cccggccctatcgggccccctggcccccgtggacggtcaggcgaaactggccctgccggt
cctcctggaaaccccgggccccctggccctccaggtccccccggccctggcatcgacatg
tctgcctttgctggcctcggccagagagagaagggccccgaccccctgcagtacatgcgg
gccgaccagccagctggtgacctgagacaacacgatgccgaggtggacgccacgctcaag
tccctcaacaaccagattgagagcctgcgcagccccgagggctcacgcaagaaccctgct
cgaacctgccgggacctgaaactctgtcaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
ggcaaggacaagaaacacatctggtttggagaaaccatcaatggcggcttccacttcagc
tatggtgatgacaacctggctcccaacactgccaacgtccagatgacgttcctacgcctg
ctgtccactgaaggctcccagaacatcacctaccactgcaagaacagcatcgcttacctg
gacgaggcagccggcaacctcaagaaggccctgctcatccagggctccaatgacgtggag
atccgggctgagggcaacagccgcttcacgtacaccgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactctgatcgagtaccggtcacagaagacctcacgtctc
cccatcattgacattgcgcccatggacataggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa
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