Entry |
|
Symbol |
COL2A1
|
Name |
(RefSeq) collagen alpha-1(II) chain
|
KO |
|
Organism |
mlk Mustela lutreola (European mink)
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Pathway |
mlk04974 | Protein digestion and absorption |
|
Brite |
KEGG Orthology (KO) [BR:mlk00001]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
131839774 (COL2A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
131839774 (COL2A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
131839774 (COL2A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
131839774 (COL2A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
131839774 (COL2A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:mlk00536]
131839774 (COL2A1)
Glycosaminoglycan binding proteins [BR:mlk00536]
Heparan sulfate / Heparin
Extracellular matrix molecules
131839774 (COL2A1)
|
SSDB |
|
Motif |
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Other DBs |
|
LinkDB |
|
Position |
8:66877395..66900220
|
AA seq |
1287 aa
MAGGFDEKAGGAQMGVMQGPMGPMGPRGPPGPAGAPGPMGPRGPPGPPGKPGDDGEAGKP
GKSGERGPPGPQGARGFPGTPGLPGVKGHRGYPGLDGAKGEAGAPGVKGESGSPGENGSP
GPMGPRGLPGERGRTGPAGAAGARGNDGQPGPAGPPGPVGPAGGPGFPGAPGAKGEAGPT
GARGPEGAQGPRGEPGTPGSPGPAGASGNPGTDGIPGAKGSAGAPGIAGAPGFPGPRGPP
GPQGATGPLGPKGQTGEPGIAGFKGEQGPKGEPGPAGPQGAPGPAGEEGKRGARGEPGGA
GPVGPPGERGAPGNRGFPGQDGLAGPKGAPGERGPSGLAGPKGANGDPGRPGEPGLPGAR
GLTGRPGDAGPQGKVGPSGAPGEDGRPGPPGPQGARGQPGVMGFPGPKGANGEPGKAGEK
GLPGAPGLRGLPGKDGETGAAGPPGPAGPAGERGEQGAPGPSGFQGLPGPPGPPGEGGKP
GDQGVPGEAGAPGLVGPRGERGFPGERGSPGAQGLQGARGLPGTPGTDGPKGASGPAGPP
GAQGPPGLQGMPGERGAAGIAGPKGDRGDVGEKGPEGAPGKDGGRGLTGPIGPPGPAGAN
GEKGEVGPPGPAGTAGARGAPGERGETGPPGPAGFAGPPGADGQPGAKGEQGEAGQKGDA
GAPGPQGPSGAPGPQGPTGVTGPKGARGAQGPPGATGFPGAAGRVGPPGSNGNPGPPGPP
GPSGKDGPKGARGDSGPPGRAGDPGLQGPAGPPGEKGEPGDDGPSGPDGPPGPQGLAGQR
GIVGLPGQRGERGFPGLPGPSGEPGKQGAPGASGDRGPPGPVGPPGLTGPAGEPGREGSP
GADGPPGRDGAAGVKGDRGEAGAVGAPGAPGPPGSPGPAGPTGKQGDRGEAGAQGPMGPA
GPAGARGIPGPQGPRGDKGEAGEAGERGLKGHRGFTGLQGLPGPPGPSGDQGASGPAGPS
GPRGPPGPVGPSGKDGANGIPGPIGPPGPRGRSGETGPAGPPGNPGPPGPPGPPGPGIDM
SAFAGLGQREKGPDPLQYMRADQPAGDLRQHDAEVDATLKSLNNQIESLRSPEGSRKNPA
RTCRDLKLCHPEWKSGDYWIDPNQGCTLDAMKVFCNMETGETCVYPNPANVPKKNWWSSK
GKDKKHIWFGETINGGFHFSYGDDNLAPNTANVQMTFLRLLSTEGSQNITYHCKNSIAYL
DEAAGNLKKALLIQGSNDVEIRAEGNSRFTYTVLKDGCTKHTGKWGKTLIEYRSQKTSRL
PIIDIAPMDIGGPEQEFGVDIGPVCFL |
NT seq |
3864 nt +upstreamnt +downstreamnt
atggctggaggattcgatgagaaggctggtggtgcccagatgggagtgatgcaagggcca
atgggccccatgggacctcggggacctccaggccctgccggtgctcctggtcccatgggc
ccccgtggtcctcctggcccccctggaaaacctggtgatgatggcgaagctggaaagcct
gggaaatctggtgaaagaggcccccctggccctcagggtgctcgcggcttcccgggaacc
ccaggccttcctggtgtcaagggtcacagaggctacccaggtctagatggtgctaaggga
gaagccggggctccaggtgtgaagggagagagtggttcacccggagagaatggctctcca
ggcccaatgggtccccgaggcctgcccggtgagcgaggacggactggccctgctggtgct
gcaggtgcccgaggcaacgatggccaaccaggtcccgcaggcccaccgggtcccgtgggt
cctgctggcggtcctggcttccctggtgctcccggggccaagggtgaagctggccccaca
ggtgctcgtggtcccgaaggtgctcaaggtcctcgaggtgaacctggtactcctgggtcc
cccgggccggctggtgcctccggtaaccccggaacagatggaattcctggagccaaagga
tctgctggtgctcctggcattgctggtgcccctggcttccctgggccccgtgggccacct
ggtcctcaaggtgcaactggtcctctgggcccgaaaggtcagacgggcgagcctggtatt
gctggcttcaagggtgaacaaggccccaagggagaacctggccctgctggcccccaagga
gcccctggtcctgctggtgaagaaggcaaacgaggagcccgtggagagcccggtggtgct
gggcccgtcggtccccctggagagagaggcgctcctggtaaccgcggtttcccaggtcag
gatggtctggcaggtcccaagggagcccctggagagcgagggcccagtggtcttgctggt
cccaaaggagccaatggtgaccctggccgtcctggagagcccggccttcctggagcccgg
ggtctcactggtcgccctggtgatgctggtcctcaaggcaaagttggtccttctggagcc
cctggtgaagatggtcgccctggtcctccaggtcctcagggcgctcgtgggcagcctggt
gtcatgggtttccctggccccaaaggtgccaacggtgaacctggcaaggctggtgagaag
ggactgcccggcgctcctggtctgagaggtcttcccggcaaagatggcgagacaggtgct
gcaggaccccccggacccgccggacctgctggtgaacgaggcgagcagggtgctcctggg
ccatctgggttccagggacttcctggccctcctggtcccccaggtgaaggtggaaaacca
ggtgaccagggtgttcccggtgaagctggagcccccggcctcgtgggtcccaggggcgaa
agaggtttcccaggtgaacgtggctctcccggggcccagggcctccagggcgcccgcggc
ctccccggcactcccggcacggacggtcccaaaggtgcatctggcccagctggcccccct
ggggctcaaggccctccaggtctgcaagggatgcccggtgagaggggagcagctggcatc
gctgggcccaagggagacaggggtgacgttggtgagaaaggccccgagggagcccccggg
aaggatggtggacgaggcctgactggtcccattggaccccctggccccgctggtgccaat
ggtgagaagggagaagttggccctcccggtcctgcaggaaccgctggtgctcgtggtgcc
ccgggtgaacgtggagagactggaccccccgggcccgctggattcgcaggtcctcctggc
gctgatggccagccaggggccaagggcgagcaaggagaggccggccagaaaggtgatgct
ggtgccccgggtcctcagggcccctctggagctcctgggcctcagggtcctactggtgtg
actggtcctaaaggagcccgaggtgctcaaggtcctccgggagccaccggattccctgga
gctgctggccgcgtcggacccccaggctccaatggaaaccctgggccccctgggccccct
ggtccttctggaaaagatggtcccaaaggtgctcgaggagacagtggccccccgggccgt
gccggtgaccctggtctccaaggtcctgctggaccccctggcgagaagggagagcccgga
gatgacggtccctctggtcctgatggtcctccaggtccccaaggtctggctggccagagg
ggtatcgttggtctacctgggcagcgcggtgagagaggattcccaggcttgcctgggcca
tcaggtgagcctggtaagcagggagctcctggtgcatctggtgaccgaggtccccctggt
cccgtgggtcctcctggcttgaccggtcccgctggtgaacccggacgagagggaagccct
ggtgctgacggcccccctggcagagatggcgcggctggagtcaagggtgatcgtggtgag
gccggtgcggtgggtgcccctggtgctcctgggccccctggctctcctggccctgctggc
ccaactggaaagcaaggagaccgaggagaagctggtgcacaaggccccatgggtcccgca
ggaccggctggagcccggggaatcccaggccctcaaggtccccgaggtgacaaaggagaa
gctggagaggctggcgagaggggactgaagggacaccgtggcttcaccggtctgcagggt
ctgcctggtccccccggtccttctggagaccaaggtgcttctggtcctgctggtccttct
ggtcctagaggtcctcctggccctgttggtccctctggcaaagatggtgctaatggaatc
cccggccctatcgggccccctggcccccgtggacggtcaggcgaaactggccctgccggt
cctcctggaaaccccgggccccctggccctccaggtccccccggccctggcatcgacatg
tctgcctttgctggcctcggccagagagagaagggccccgaccccctgcagtacatgcgg
gccgaccagccagctggtgacctgagacaacacgatgccgaggtggacgccacgctcaag
tccctcaacaaccagattgagagcctgcgcagccccgagggctcacgcaagaaccctgct
cgaacctgccgggacctgaaactctgtcaccctgaatggaagagcggagactactggatt
gaccccaaccagggctgcaccttggacgccatgaaggttttctgcaacatggagactggc
gagacctgcgtctaccccaacccagcgaacgttcccaagaagaactggtggagcagcaag
ggcaaggacaagaaacacatctggtttggagaaaccatcaatggcggcttccacttcagc
tatggtgatgacaacctggctcccaacactgccaacgtccagatgacgttcctacgcctg
ctgtccactgaaggctcccagaacatcacctaccactgcaagaacagcatcgcttacctg
gacgaggcagccggcaacctcaagaaggccctgctcatccagggctccaatgacgtggag
atccgggctgagggcaacagccgcttcacgtacaccgtcctgaaggatggctgcacgaaa
cacaccggtaagtggggcaagactctgatcgagtaccggtcacagaagacctcacgtctc
cccatcattgacattgcgcccatggacataggagggcccgagcaggaatttggtgtggac
atagggcctgtctgcttcttgtaa |