Mycolicibacterium litorale: B1R94_07185
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Entry
B1R94_07185 CDS
T05032
Name
(GenBank) ATP-dependent RNA helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
mll
Mycolicibacterium litorale
Pathway
mll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1R94_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mll03019
]
B1R94_07185
03009 Ribosome biogenesis [BR:
mll03009
]
B1R94_07185
Enzymes [BR:
mll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
B1R94_07185
Messenger RNA biogenesis [BR:
mll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
B1R94_07185
Ribosome biogenesis [BR:
mll03009
]
Prokaryotic type
rRNA helicases
B1R94_07185
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
ResIII
CMS1
UvrA_inter
HEM4
Flavi_DEAD
DUF4015
Motif
Other DBs
NCBI-ProteinID:
AQT79104
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All DBs
Position
1466577..1468307
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AA seq
576 aa
AA seq
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MTSPEDQRADADEAAPQTFADLQIHPAVLQAVADVGYETPSAIQAATIPALLAGSDVVGL
AQTGTGKTAAFAIPILSKIDPENRSTQALVLAPTRELALQVAEAFSRYGAHLKINVLPIY
GGSSYVPQLAGLKRGAQVVVGTPGRVIDHLEKGSLDLSHLDYLVLDEADEMLQMGFAEDV
ERILADTPEYKQVALFSATMPPGIKKITTKYLHDPVEVTVKSKTQTAENIAQRYFQVSYP
RKIDALTRLLEVEEGDAMIVFVRTKQATEEVAEKLRARGFAAAAINGDIPQAVRERTIAS
LKDGTIDVLVATDVAARGLDVERISHVVNFDIPHDPESYVHRIGRTGRAGRSGTAFLFVT
PRERHLLNSIERVTRQKLVEGQLPSVEDVNAQRVEKFKDSITDALNAPGFEMFRRLIEDY
ERDNDVPMVDIAAALALQSRDGAEFLMTEPPPEKRRERAERPDRDERERAPRRTRDDLAT
YRIAVGKRHKVGPGSIVGALANEGGLHRSDFGHITIKENFSLVELPAKLSKDTLKALEKT
RISGILIDLKPDRGNPKYDSRSDSRPSGGKPRRTSR
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atgacatccccggaagaccagcgcgccgacgccgacgaggccgccccccagaccttcgcc
gacctgcagattcaccccgcggtgctgcaggccgttgctgacgtcggctacgaaacgccc
tcggccattcaggcagccaccattcccgccctgctggccgggtccgacgtggtcggcctg
gcccagaccggcaccggtaagaccgccgcgttcgccatcccgatcctgtcgaagatcgac
cccgagaaccgcagcacccaggccctggtgctggcgccgacccgcgagctggccctgcag
gtcgccgaggcgttcagccgctacggtgcccatctgaagatcaatgtgctgcccatctac
ggcggttcgtcctacgtcccgcagctggccggcctcaagcgcggcgcgcaggtcgtcgtc
ggcaccccgggccgggtcatcgaccatctcgagaagggcagtctggacctgtcccacctg
gactatctggtgctcgacgaggccgacgagatgctgcagatgggattcgccgaggatgtc
gagcgcatcctggccgacaccccggagtacaagcaggtcgcgttgttctcagcgacgatg
ccgccgggtatcaagaagatcaccaccaagtacctgcatgaccctgtcgaggtcacggtc
aagtcaaagacccagaccgcggagaacatcgcccagcggtatttccaggtgtcgtatccg
cgcaagatcgacgcgctgacccgcttgctggaggtggaggagggcgacgcgatgatcgtg
ttcgtccgcaccaagcaggccaccgaggaggtcgccgagaagctgcgggcccgcgggttt
gccgcggcggcgatcaatggcgatatcccacaggcggtccgggagcggacgatcgcgtcg
ctgaaggacggcacgatcgacgtcctggtcgccaccgatgtcgccgcccgcggcctggac
gtcgagcgcatctcgcatgtggtgaatttcgacatcccgcacgacccggagtcgtatgtg
caccgcatcgggcgcaccggccgcgccggccgctcgggaacggcattcctgttcgtcacc
ccgcgcgaacgtcacctgctcaactcgatcgagcgggtcacccggcagaagttggttgaa
ggccagttgccgtcggtcgaggacgtcaacgcccagcgggtggagaagttcaaggattcg
atcaccgacgcgctcaacgcgcccggcttcgagatgttccgccggctgatcgaggactac
gagcgcgacaatgacgtgcccatggtcgacatcgccgctgcgctggccctgcagagccgt
gacggcgcggagttcctgatgaccgagccgccgccggagaagcggcgggaacgggcagag
cgtcccgaccgcgatgagcgagaacgcgcgccgcgcaggacgcgtgacgacctggccacc
tatcgcatcgcggtcggcaaaaggcacaaggtcggacccggctcgatcgtcggcgcgctg
gccaacgagggcggcctgcaccgcagcgatttcgggcacatcaccatcaaggagaacttc
tcgctggttgaactgcccgcgaagctgtccaaggacacgttgaaagcgcttgagaagacc
cggatttccgggatcctcatcgacttgaagcccgaccgcggcaacccgaaatacgattcg
cgttcagactcacgtccctccggcgggaagccccggcgcacgagccgatga
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