Mycolicibacterium litorale: B1R94_17715
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Entry
B1R94_17715 CDS
T05032
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
mll
Mycolicibacterium litorale
Pathway
mll03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
mll00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
B1R94_17715
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
mll03019
]
B1R94_17715
03016 Transfer RNA biogenesis [BR:
mll03016
]
B1R94_17715
Enzymes [BR:
mll01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
B1R94_17715
Messenger RNA biogenesis [BR:
mll03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
B1R94_17715
Transfer RNA biogenesis [BR:
mll03016
]
Prokaryotic type
tRNA degradation factors
B1R94_17715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
KH_1
RNase_PH_C
KH-I_KHDC4-BBP
KH_2
KH_PNO1_2nd
KH_KhpA-B
S1_RRP5
YqzN_YkzM
OB_cyt-4
Motif
Other DBs
NCBI-ProteinID:
AQT80703
LinkDB
All DBs
Position
complement(3733269..3735542)
Genome browser
AA seq
757 aa
AA seq
DB search
MSVAEIDEGVFESTAVIDNGSFGTRTIRFETGRLAQQAAGAVVAYLDDETMLLSATTASK
SPKEHFDFFPLTIDVEERMYAAGRIPGSFFRREGRPSTDAILTCRLIDRPLRPSFVSGLR
NEIQVVVTILSLDPKDLYDVLAINAASASTQIAGLPFSGPVGGVRVALIGDQWVAFPTVE
QLEGAVFDMVVAGRVVGDGDHKDVAIMMVEAEATENVIDLVAGGAQAPTESVVAEGLEAA
KPFIATLCAAQSELASRAAKETADYPLFPDYAEDVYNAVAHVASEPLAAALTIAGKNERN
DRTDEIKNEVLGELGETFAGREKEIGAAYRSLTKKLVRQRILTDHFRIDGRGITDIRALS
AEVAVIPRAHGSALFERGETQIMGVTTLDMVKMAQQIDSLGPETSKRYMHHYNFPPYSTG
ETGRVGSPKRREIGHGALAERALMPVLPSVEEFPYAIRQVSEALGSNGSTSMGSVCASTL
ALLNAGVPLKAPVAGIAMGLVSDQVDGETRYVALTDILGAEDAFGDMDFKVAGTKDFVTA
LQLDTKLDGIPSQVLAGALSQAKDARLTILEVMAEAIDAPDEMSPYAPRVTTIKVPVDKI
GEVIGPKGKMINSITEQTGASISIEDDGTVFVGATDGPSAQAAIDMINAIANPQLPKVGE
RFLGTVVKTTDFGAFVSLLPGRDGLVHISKLGRGKRIAKVEDVVKVGDKLRVEIADIDNR
GKISLILVAEDESAESAPATEEAAPAAADADAATASS
NT seq
2274 nt
NT seq
+upstream
nt +downstream
nt
atgtctgtagctgaaatcgacgaaggcgtgttcgaatcgaccgccgtcattgacaacggg
agcttcggcacccgcaccatccgcttcgagaccggccggctggcccagcaggccgccggc
gccgtcgtcgcctatctcgacgacgagaccatgctcctgtcggcgaccaccgccagcaag
agccccaaggagcacttcgacttcttcccgctgaccatcgacgtcgaggagcggatgtat
gccgccgggcggatccccggctcgttcttccgtcgcgagggacgcccgtccaccgacgcg
atcctgacctgccgcctcatcgaccggccgctgcgcccgtcgttcgtctcgggtctgcgc
aacgagatccaggtcgtcgtcacgatcctgagtctggatcccaaggatctgtacgacgtg
ctggcgatcaacgccgcctcggcctccactcagatcgccggcctgccgttctccggcccg
gtcggcggcgtgcgcgtcgccctcatcggggaccagtgggtggccttcccgaccgttgaa
caactcgaaggtgcggttttcgacatggtcgtcgccggccgggtggtcggcgatggtgac
cacaaggacgtcgcgatcatgatggtcgaggccgaggccaccgagaacgtcatcgacctg
gtcgccggcggtgcgcaggcgcccaccgagagcgttgtcgccgagggcctggaggctgcg
aagcccttcatcgccacactgtgcgcggcgcagagtgagctcgcgagccgggccgccaag
gagaccgcggattacccgctgttcccggactacgccgaggacgtctacaacgccgtcgcc
cacgtggccagtgagccgctcgcggctgccctgaccatcgccggcaagaacgagcgcaac
gaccgcaccgacgaaatcaagaacgaggtgctcggcgagctcggcgaaaccttcgccggc
cgcgagaaggagatcggcgccgcttaccggtcgctgaccaaaaagcttgtgcgccagcgc
atcctgaccgaccacttccgtattgacggccgcggcatcaccgatatccgggcgttgtcg
gccgaggtcgccgtgatcccgcgggcccacggcagcgccctgttcgagcgtggcgagacc
cagatcatgggtgtcaccaccctggacatggtcaagatggcccagcagatcgactcgctc
ggaccggagacctccaagcgctacatgcaccactacaacttcccgccgtattcgaccggt
gagaccggccgggtgggttcgcccaagcgccgcgaaatcggccacggcgcgctggccgag
cgggccctgatgccggtgctgccgagcgtcgaggagttcccgtacgcgatccgtcaggtg
tccgaagcgctgggctccaacggttcgacgtcgatgggttcggtgtgcgcctcgaccctg
gcactgctcaacgccggtgtgccgctcaaggccccggttgccggcatcgcgatgggtctg
gtgtctgaccaggtcgatggcgaaacccggtatgtggcgctgaccgacatcctcggtgcc
gaagacgccttcggcgacatggacttcaaggtcgccggcaccaaggacttcgtcaccgcc
ctgcagctggacaccaagctggacggcatcccgtcccaggtgctggccggtgcgctgtcg
caggccaaggatgctcgcctgaccatcctcgaggtcatggccgaggcgatcgacgccccg
gacgagatgagcccctacgccccgcgggtcaccaccatcaaggtgccggtggacaagatc
ggtgaggtcatcggccccaagggcaagatgatcaactcgatcaccgagcagaccggcgcg
tccatctcgatcgaggacgacggcaccgtcttcgtcggtgcgaccgacggcccgtcggcg
caggccgcgatcgacatgatcaacgcgatcgccaacccgcagctgcccaaggtcggcgag
cggttcctcggaacggtggtcaagaccactgatttcggcgccttcgtgtcgctgctgccc
ggccgtgacggcctggtgcacatctcgaagctgggccgcggcaagcggatcgccaaggtc
gaagatgtcgtcaaggtcggtgacaagctccgggtggagatcgccgacatcgacaatcgc
ggcaagatctcgctgatcctggtcgccgaggacgagtccgcggaatcggctcccgctacc
gaggaagctgcaccggctgctgccgatgccgatgccgcgacagccagcagctag
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