Mycolicibacterium litorale: B1R94_18530
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Entry
B1R94_18530 CDS
T05032
Name
(GenBank) DNA-formamidopyrimidine glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mll
Mycolicibacterium litorale
Pathway
mll03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1R94_18530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mll03400
]
B1R94_18530
Enzymes [BR:
mll01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B1R94_18530
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B1R94_18530
DNA repair and recombination proteins [BR:
mll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1R94_18530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
TackOD1
Zn_ribbon_TFIIB
GGDEF_2
Auto_anti-p27
DUF6215
Zn_ribbon_6
Cys_rich_KTR
DUF7119
Motif
Other DBs
NCBI-ProteinID:
AQT80835
LinkDB
All DBs
Position
complement(3913561..3914412)
Genome browser
AA seq
283 aa
AA seq
DB search
MPELPEVEVVRRGLQAHVAGRVITAVRVHHPRAVRRHVAGAADLTARLLDARITGTDRRG
KYLWLNLDDDHTALVVHLGMSGQMLLGAVPNTGHLRIATLLDDGTTMSFVDQRTFGGWQL
ADLVTVDGSRVPAPVAHIARDPLDPLFDRDAVVTVLRRKHSEIKRQLLDQTVVSGIGNIY
ADEALWRAKLNGARLAEKLTRRELATLLDAATEVMREALGQGGTSFDSLYVNVNGQSGYF
DRSLNVYGREDLPCPRCGTAIRREKFMSRSSYYCPKCQPRPRR
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgcctgagttgcccgaggtggaggtcgtccggcgcggcctgcaggcgcacgtcgccggc
cgggtgatcaccgcggtgcgggtgcaccacccccgcgcggtgcgccgccacgttgccggc
gccgccgatctgaccgcacggctgctggacgcgcgcatcaccggcaccgaccggcgcgga
aagtacttgtggctcaatctcgacgacgatcacaccgcattggtggtgcatctggggatg
agcgggcagatgctgctcggggcggtcccgaacaccggccatctgcggatcgcgacgttg
ctcgacgacggcaccacgatgagcttcgtcgaccagcgcacgttcggcgggtggcagctc
gccgatttggtcaccgtcgacggcagccgagtccctgcccccgtcgcgcacatcgcccgc
gatccgctggacccgttgttcgaccgcgacgccgtcgttacggtgttgcggcgcaagcac
tccgagatcaaacgccagctgctcgaccagacggtggtgtcgggtatcggcaacatctac
gccgacgaggcactctggcgagccaagctcaacggcgcgcggctggccgagaaactcacc
cgccgcgaactcgccaccctgctggacgcggccaccgaggtgatgcgcgaggcactgggt
cagggcggtacgtccttcgactcgctgtatgtcaacgtcaacggccagtccggctacttc
gaccggtccctgaacgtctacggccgcgaggatctgccctgtccgcggtgcggcaccgcg
attcggcgggagaagttcatgagccgctcgtcgtactactgcccgaaatgccagccccgc
ccgcggcgttga
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