Mycolicibacterium litorale: B1R94_23250
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Entry
B1R94_23250 CDS
T05032
Name
(GenBank) DNA helicase PcrA
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
mll
Mycolicibacterium litorale
Pathway
mll03420
Nucleotide excision repair
mll03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
mll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
B1R94_23250
03430 Mismatch repair
B1R94_23250
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mll03400
]
B1R94_23250
Enzymes [BR:
mll01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
B1R94_23250
DNA repair and recombination proteins [BR:
mll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
B1R94_23250
MMR (mismatch excision repair)
Other MMR factors
B1R94_23250
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_30
DEAD
CarD_TRCF_RID
Motif
Other DBs
NCBI-ProteinID:
AQT81543
LinkDB
All DBs
Position
complement(4891878..4894208)
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AA seq
776 aa
AA seq
DB search
MTVHVTQYQPPTQAAELLDGLNPQQRQAVLHEGTPLLIVAGAGSGKTAVLTRRIAYLLAA
RDVGPGQVLAITFTNKAAAEMRERVVALVGPRARNMWVSTFHSTCVRILRNQASLLPGLN
SNFSIYDADDSRRLLLMIGKDMGLDVKRYSPRLLANGISNLKNELITPEDAVAALEPGAD
ELARTVATVYAEYQRRLRAANALDFDDLIGETVAVLQNFPQIAQYYRRRFRHILVDEYQD
TNHAQYVLVRELVGVGAPDTDTVPPSELCVVGDADQSIYAFRGATIRNIEDFERDFPNAT
TILLEQNYRSTQNILSAANSVISRNAGRREKRLWTDAGDGELIVGYVADNEHDEARFVAG
EIDALADRGEITYNDVAVFYRTNNSSRALEEVFIRAGIPYKVVGGVRFYERKEIRDIVAY
LRVLDNPGDAVSLRRILNTPRRGIGDRAEACVAVYAENTGATFADALAAAAEGKVPMLNS
RSEKAIASFVNLLDELRGRLDDELGDLVEAVLDRTGYRNELESSSDPQDLARLDNLNELV
SVAHEFSIDRANAAALADEGTGTDEDIPQTGLLAEFLERVSLVADSDELPEHDSGVVTMM
TLHTAKGLEFPVVFVTGWEDGMFPHMRALGDPGELSEERRLAYVGITRARQRLYLTRAKV
RSSWGQPMLNPESRFLREIPEHLLEWRRTDPAPSYSAPVSGAGRFGSQRPSPMRSSGGGK
RPLIVLEPGDRVNHDKYGLGRVEEVSGAGESAMSLIDFGSAGRVKLMHNHAPLQKL
NT seq
2331 nt
NT seq
+upstream
nt +downstream
nt
atgactgtgcacgtgacgcaataccagcccccgacccaagcggccgaacttctcgacggt
ctcaacccgcagcagcgccaggcggtgctgcacgagggcaccccgttgctgatcgtggcc
ggcgcagggtcgggcaagacggcggtgctgacccgccggatcgcctacctgttggccgcc
cgcgacgtcggccccggccaggtcttggcgatcaccttcaccaacaaggccgccgccgag
atgcgtgagcgggtggtcgcgctcgtcggcccgcgggcccgcaacatgtgggtatcgacg
ttccactcgacatgtgtgcggatcctgcgcaaccaggcgtcgctgctgccggggctgaac
tccaacttctcgatctacgacgccgacgactcgcggcggctgctgctgatgatcggcaag
gacatgggcctcgacgtgaagcggtactcgccgcggctgctggccaacgggatctccaac
ctgaagaacgaactgatcacccccgaagacgcggtcgccgcgctcgaaccgggggccgac
gagttggcccgcaccgtcgccacggtgtacgcggaataccagcgcaggctgcgcgccgcc
aatgcgctggacttcgacgacctcatcggcgagaccgtcgccgtgctgcagaacttcccg
cagatcgcccagtactaccgcaggcggttccgccacatcctggtcgacgagtaccaggac
accaaccacgcccagtacgtcctggtgcgcgaattggtcggggtgggcgccccggacacc
gacacggtgccgcccagcgagctgtgtgtcgtcggtgacgccgaccagtccatctacgcc
ttccgcggcgcgacgatccgcaacatcgaggacttcgagcgggacttcccgaacgccacg
acgatcctgctcgaacagaactaccggtccacccagaacatcctgtcggcggcgaactcg
gtgatctcccgcaacgccgggcgcagggagaagcggttgtggaccgacgccggcgacggc
gagctgatcgtcggctacgtcgccgacaacgaacacgacgaggcccggttcgtcgccggt
gagatcgacgcgctcgccgaccgcggagagatcacctataacgacgtggcggtgttctac
cggaccaacaactcctcgcgtgcgctggaagaggtcttcatcagggcgggcatcccctac
aaggtcgtcggcggcgttagattctacgaacgcaaggagattcgcgacatcgtcgcctac
ctgcgggtgctggacaaccccggtgacgcggtgagcctgcgccgcatcctgaacaccccg
cgtcgcggtatcggcgaccgtgccgaagcctgcgtggcggtgtacgccgagaacaccggc
gccaccttcgccgacgcgctggccgccgcagcggagggcaaggtgccgatgctcaacagc
cgctcggagaaggcgatcgcgagcttcgtcaacctcctcgacgaattgcgcggcaggctc
gacgacgagctgggtgacctcgtcgaagcggtgctggaccgcaccggctaccgcaacgag
ctggaatcctccagcgatccgcaggacctggcgcggctggacaacctcaacgaattggtc
agcgtcgcacacgaattcagcatcgaccgagccaacgccgcggcgctggccgacgagggc
accggcaccgacgaagacatcccgcagaccggtctgctcgccgagttcctggagcgggtg
tcattggtcgccgactccgacgaactgcccgagcacgactccggtgtggtcacgatgatg
acgctgcacaccgccaaggggttggagttccccgtggtgttcgtgaccggctgggaagac
gggatgttcccgcacatgcgggcgttgggcgatccgggcgagctctccgaagaacgccgg
ttggcttatgtgggcatcacccgtgcccgtcagcggctctacctcacccgggcgaaggtc
cgctcctcctgggggcagccgatgctcaatcccgaatctcgtttcctccgtgagattccc
gagcatctgctcgaatggcggcgtaccgacccggcaccgtcgtacagcgcaccggtgagc
ggggcggggcgcttcggcagccagcggccctcgccgatgcggtcttcggggggcggtaag
cggccgctgatcgtgctggagcccggggatcgggtcaaccacgacaagtacggcctgggc
cgcgtcgaggaggtttccggtgcgggggagtcggcgatgtcgctgatcgacttcggcagc
gccggacgggtgaaactcatgcacaatcacgcgccgctacagaagctctag
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