Mycolicibacterium litorale: B1R94_23330
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Entry
B1R94_23330 CDS
T05032
Name
(GenBank) endonuclease VIII
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
mll
Mycolicibacterium litorale
Pathway
mll03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
mll00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B1R94_23330
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
mll03400
]
B1R94_23330
Enzymes [BR:
mll01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
B1R94_23330
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
B1R94_23330
DNA repair and recombination proteins [BR:
mll03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B1R94_23330
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
Ribosomal_S13
NFACT_N
Zn_ribbon_TFIIB
DUF7577
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AQT81557
LinkDB
All DBs
Position
complement(4911533..4912387)
Genome browser
AA seq
284 aa
AA seq
DB search
MPELPEVEALADHLRRHAVGKTVGRVDVAALSVLKTFDPPSTALHGQTVTGAGRWGKYLG
MQAGGLWLVTHLSRAGWLKWSDKLSAAPLKPGKGPIALRVHLDGCEGFDLTEAGTQKRLA
VWIVDDPAKVPGIATLGPDALDLGPEQLADILKPHSGRIKTVITDQKVIAGIGNAYSDEI
LHVAKLSPFATANKLSAAQLGTLHDAMISVLTDAVQRSVGQQAATLKGEKRSGLRVHART
GLPCPVCGDTVREVSFVDKSFQYCPTCQTGGKVLADRRMSKLLK
NT seq
855 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaactgccggaagtcgaggcgctcgccgaccatctgcgccggcatgccgtcggc
aagaccgtcggtcgcgtcgacgtcgcggcactgtcggtgctgaaaacgttcgatccgccg
tcgacggcgttgcacgggcagaccgtgaccggcgcgggtcgctggggtaagtatctcggc
atgcaggccggtggtctgtggctggtcacccacctgtcccgggccggctggctgaagtgg
agcgacaagctgtccgcggccccactcaaacccggcaaggggccgatcgcgttgcgggtg
cacctcgacggctgcgagggattcgacctgaccgaggccggcacccagaagcggctggcg
gtgtggatcgtcgacgaccccgccaaggtccccggcatcgcgaccctcgggcccgacgcg
ctcgatctcggccccgaacagctcgccgacatcctcaagccgcacagcggccggatcaag
acggtgatcaccgaccagaaggtcatcgccgggatcggtaacgcctacagcgacgagatc
ctgcatgtcgcgaagctgtccccgttcgcgaccgccaacaagctcagcgctgcccagttg
ggcacgttgcatgacgcgatgatctcggtgctgaccgatgccgttcagcgttcggtggga
cagcaggcggcaacgctgaagggggagaagcgatccggactgcgggtgcacgccaggacc
ggcttgccgtgcccggtctgcggggacaccgtgcgcgaggtgtcgttcgtggacaagtcg
tttcagtactgcccgacctgtcagaccggcggcaaggtgctggccgatcggcggatgtcg
aaactgttgaagtag
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